EMLSAG00000001153, EMLSAG00000001153-683919 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001153
Unique NameEMLSAG00000001153-683919
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592893579|gb|GAXK01064796.1| (TSA: Calanus finmarchicus comp4336892_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 41.5874 bits (96), Expect = 1.593e-4
Identity = 24/105 (22.86%), Postives = 46/105 (43.81%), Query Frame = 0 
Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQL-----QTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            +  CL+T A+H+E++ +     F+   +      G P+++  D       ++KQ+     ++ +  ++ KV E   S +   W F  +   W N   E    IFK
Sbjct:   57 IICCLNTGAVHLELLHTYGAEAFLLRWKVFTCTRGDPKLVISDKGSQLQAASKQVDWTRKESPEQWEWEKV-EHATSAKGTRWHFVPAGCQWQNGLAESRIKIFK 368
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592893580|gb|GAXK01064795.1| (TSA: Calanus finmarchicus comp4336892_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 41.2022 bits (95), Expect = 1.754e-4
Identity = 24/105 (22.86%), Postives = 46/105 (43.81%), Query Frame = 0 
Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQL-----QTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            +  CL+T A+H+E++ +     F+   +      G P+++  D       ++KQ+     ++ +  ++ KV E   S +   W F  +   W N   E    IFK
Sbjct:  109 IICCLNTGAVHLELLHTYGAEAFLLRWKVFTCTRGDPKLVISDKGSQLQAASKQVDWTRKESPEQWEWEKV-EHATSAKGTRWHFVPAGCQWQNGLAESRIKIFK 420
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592823516|gb|GAXK01131052.1| (TSA: Calanus finmarchicus comp3507114_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 39.6614 bits (91), Expect = 5.964e-4
Identity = 23/101 (22.77%), Postives = 47/101 (46.53%), Query Frame = 0 
Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQ-LQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            LF CL   A+ + ++    T +F+      +  YG+P + Y D   N V++ ++   T+ + D++++     S    +W+F  + + + N   E     FK
Sbjct:  417 LFVCLQVKAVKIYLVGGLHTEDFLLAWDSFVADYGQPMVAYSDRGSNLVSAAREGGDTVPDYDWDRIA--GCSQGKTDWQFHPAGSQFRNGAVEIFVKKFK 713
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592935729|gb|GAXK01022824.1| (TSA: Calanus finmarchicus comp1637438_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 40.0466 bits (92), Expect = 6.418e-4
Identity = 24/105 (22.86%), Postives = 52/105 (49.52%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQ---TLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            +A+F C  +SA+ + + +  S   F+Q   + +  + KP ++Y D     V +   L    + + +D+ K+  +      ++W F+++++ W N    R EA+ K
Sbjct: 1183 IAVFACSLSSAVKLYVCKDYSEEGFMQVWHQHVADWAKPAMVYSDRGSQLVAAAGGLDPGDSEEELDWAKLGRKTG----VKWTFTSAQSQWKNG---RAEALVK 1476
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592884735|gb|GAXK01073640.1| (TSA: Calanus finmarchicus comp3167281_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 38.5058 bits (88), Expect = 1.919e-3
Identity = 17/52 (32.69%), Postives = 26/52 (50.00%), Query Frame = 0 
Query:    2 ALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTS 53
            ALF CL+T A+ + +    ST +F+          GKP+ +Y D  RN   +
Sbjct: 2955 ALFCCLNTGALAIYVAAGNSTEKFLTAYSHYCSDRGKPKFVYSDRGRNLTKA 3110
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592880223|gb|GAXK01077678.1| (TSA: Calanus finmarchicus comp5163893_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.965 bits (84), Expect = 2.154e-3
Identity = 14/64 (21.88%), Postives = 30/64 (46.88%), Query Frame = 0 
Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFN 66
            LF CL   A+ + ++    T +F+      +  +G+P+I Y D   N   + ++    +  D++
Sbjct:  174 LFVCLQVKAVKIYLVGGLHTEDFLLAWDSFVADHGQPQIAYSDRGSNLTAAAREGGDTEVPDYD 365
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592917301|gb|GAXK01041074.1| (TSA: Calanus finmarchicus comp7409526_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 37.3502 bits (85), Expect = 2.757e-3
Identity = 17/70 (24.29%), Postives = 37/70 (52.86%), Query Frame = 0 
Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEEN 72
            L  CL+T A+ + I    ST +F+    +    +G+P  ++ D   N V + K++ T  + D++ +++ +
Sbjct:  301 LILCLNTKAVKLYIAAGYSTADFLMTFEQYPSDHGQPATVHSDRGSNLVCAAKEVDT-PDYDWDIIEKSS 507
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592868284|gb|GAXK01089278.1| (TSA: Calanus finmarchicus comp5307518_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.965 bits (84), Expect = 3.415e-3
Identity = 13/54 (24.07%), Postives = 29/54 (53.70%), Query Frame = 0 
Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQ 56
            LF CL   A+ + ++    T +F+ +    +  +G+P ++Y D   N V++ ++
Sbjct:  309 LFVCLQVKAVKIYLVGGLHTEDFLLSWDSFVADHGQPLVVYSDRGPNMVSAARE 470
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592800806|gb|GAXK01153762.1| (TSA: Calanus finmarchicus comp3388558_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.965 bits (84), Expect = 5.839e-3
Identity = 18/65 (27.69%), Postives = 32/65 (49.23%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDF 65
            +A+F CL++   H+E+IE + T   +  L     LYG P  +  D          ++Q L++ +F
Sbjct: 1011 VAVFACLYSRMTHLEVIEDKKTESILGALNTLGCLYGPPSCVTVDKDA------AEIQALRDSEF 1187
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592858944|gb|GAXK01098618.1| (TSA: Calanus finmarchicus comp2801899_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.1946 bits (82), Expect = 8.890e-3
Identity = 21/93 (22.58%), Postives = 44/93 (47.31%), Query Frame = 0 
Query:    6 CLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMD-FNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            C  T+A+ + I    S   F+Q  R+ +  +G+P+++Y D     V++   +      D  +  +    +G  ++W F+ +++ W N   E M
Sbjct:  579 CSVTAALKLYICRDYSEEGFLQAWRQHVCDWGEPDLVYSDRGTQLVSAAGGIDPADEEDELDWARIGRTTG--VKWVFTPAQSQWKNGRAESM 851
[Close]
BLAST of EMLSAG00000001153 vs. L. salmonis peptides
Match: EMLSAP00000001153 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1190:92088:92396:-1 gene:EMLSAG00000001153 transcript:EMLSAT00000001153 description:"snap_masked-LSalAtl2s1190-processed-gene-0.16")

HSP 1 Score: 214.927 bits (546), Expect = 4.030e-73
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK
Sbjct:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM60670.1| (hypothetical protein X975_07709, partial [Stegodyphus mimosarum])

HSP 1 Score: 73.559 bits (179), Expect = 6.174e-16
Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            + LFTC    AIH+E++ S ST  F+   R  I   G+PEI+Y +N  NFV +N     L+ +D++K+  +N+     +WKF    +PW   F ERM A+ K
Sbjct:  114 IVLFTCAIYRAIHLELLTSLSTDNFLLAFRHFIARRGRPEIVYAENGSNFVGTN---SLLRMIDWDKII-KNHIVNRTKWKFIPPASPWWGGFWERMIALMK 211
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM68396.1| (hypothetical protein X975_24834, partial [Stegodyphus mimosarum])

HSP 1 Score: 68.1662 bits (165), Expect = 5.298e-14
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            + LFTC    AIH+E+  S ST  F+ +LR+ +   G+P IIY DN  NF  + ++L    N+D+ K+  +  + E I WKF+   A W   + ER+  + K
Sbjct:  726 IVLFTCAIYRAIHLELTSSLSTDTFLMSLRRFVARRGRPRIIYSDNGTNFRGAQRELS---NIDWEKILRQTAT-ERIIWKFNPPTAAWWGGWWERLVRMVK 823
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM74603.1| (putative RNA-directed DNA polymerase from transposon X-element, partial [Stegodyphus mimosarum])

HSP 1 Score: 68.1662 bits (165), Expect = 6.434e-14
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            + LFTC    AIH+E+  S ST  F+ +LR+ +   G+P IIY DN  NF  + ++L    N+D+ K+  +  + E I WKF+   A W   + ER+  + K
Sbjct: 1417 IVLFTCAIYRAIHLELTSSLSTDTFLMSLRRFVARRGRPRIIYSDNGTNFRGAQRELS---NIDWEKILRQT-ATERIIWKFNPPTAAWWGGWWERLVRMVK 1514
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM59784.1| (hypothetical protein X975_08509, partial [Stegodyphus mimosarum])

HSP 1 Score: 67.781 bits (164), Expect = 7.124e-14
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            + LFTC    AIH+E+  S ST  F+ +LR+ +   G+P IIY DN  NF  + ++L    N+D+ K+  +  + E I WKF+   A W   + ER+  + K
Sbjct: 1207 IVLFTCAIYRAIHLELTSSLSTDTFLMSLRRFVARRGRPRIIYSDNGTNFRGAQRELS---NIDWEKILRQTAT-ERIIWKFNPPTAAWWGGWWERLVRMVK 1304
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM62154.1| (hypothetical protein X975_06179, partial [Stegodyphus mimosarum])

HSP 1 Score: 66.2402 bits (160), Expect = 3.203e-13
Identity = 33/97 (34.02%), Postives = 51/97 (52.58%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            +ALFTC  T AIH+E++ + ST  F+   ++     G   +IY DN++ F    K+L+    +  N+  ++  S E IEWKF      W   F ER+
Sbjct: 1474 VALFTCATTRAIHLELVPNLSTDSFLMAFKRFTSRRGNCRVIYSDNAKTFKKGKKELENFSKLLSNEKFQDFLSNEKIEWKFIIDRGAWWGGFYERL 1570
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KXZ75531.1| (hypothetical protein TcasGA2_TC033491 [Tribolium castaneum])

HSP 1 Score: 65.855 bits (159), Expect = 4.244e-13
Identity = 33/92 (35.87%), Postives = 53/92 (57.61%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNK----VQEENYSGEYIEWKFSTSEAP 88
            + +F CL T AIH+E +   +T+ F+Q LR+ +   GKP +IY DN  NFV ++ +LQ L N   +K    V + + + + I W F  + +P
Sbjct: 2320 ICVFVCLTTRAIHLEAVSDLTTQCFLQTLRRFVARRGKPRVIYSDNGSNFVGASSELQRLYNFIRSKSNFDVIQTSLANDSISWIFIPANSP 2411
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|EFA09479.1| (hypothetical protein TcasGA2_TC010973 [Tribolium castaneum])

HSP 1 Score: 62.7734 bits (151), Expect = 5.153e-12
Identity = 33/106 (31.13%), Postives = 59/106 (55.66%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNM----DFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            +ALF CL   A+H+E++   ++  F+  L++ +   GK E I  DN  NFV +N++LQ ++++    +F K   +  + E I+WKF  +++P+     E     FK
Sbjct: 1201 VALFICLVMRAVHLELVLDYTSESFLNALKRMMARRGKVESIISDNGTNFVGANRELQEIEHLFKSNEFEKNVVKELNNEGIKWKFIPAKSPYIGGIWEAGVKAFK 1306
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM75025.1| (Jerky-like protein, partial [Stegodyphus mimosarum])

HSP 1 Score: 59.3066 bits (142), Expect = 6.484e-11
Identity = 31/89 (34.83%), Postives = 51/89 (57.30%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQL-QTLKNMDFNKVQEENYSGEYIEWKFSTSEAP 88
            + LF C  T AIH+E++   ST+ F+  L++ I   GKP  I+ D + NF+ +NK+L + L  +  ++  +   S E I+W F+   AP
Sbjct:  414 ICLFICFTTRAIHLELVGDLSTKSFLATLKRFIARRGKPCEIHSDCATNFIGANKELRKVLSTVQRDEHLQGYISSENIKWLFNPPSAP 502
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM75559.1| (hypothetical protein X975_18538, partial [Stegodyphus mimosarum])

HSP 1 Score: 58.151 bits (139), Expect = 1.954e-10
Identity = 28/97 (28.87%), Postives = 50/97 (51.55%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + +FTC  T AIH+E++    T  F+  L++ +     P  +Y DN+  F  ++K+L+   +   +   ++ Y+   I+WKF    A W   + ERM
Sbjct: 1402 IVIFTCATTRAIHLELVSDLRTDVFLLALQRFVSRRSLPHTVYTDNATTFCAADKELKLFWDTISSAKVQQFYAHHNIKWKFIAPRAAWWGGWWERM 1498
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM70593.1| (hypothetical protein X975_21762, partial [Stegodyphus mimosarum])

HSP 1 Score: 57.7658 bits (138), Expect = 2.371e-10
Identity = 28/97 (28.87%), Postives = 50/97 (51.55%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + +FTC  T AIH+E++    T  F+  L++ +     P  +Y DN+  F  ++K+L+   +   +   ++ Y+   I+WKF    A W   + ERM
Sbjct: 1323 IVIFTCATTRAIHLELVSDLRTDVFLLALQRFVSRRSLPHTVYTDNATTFCAADKELKLFWDTISSAKVQQFYAHHNIKWKFIAPRAAWWGGWWERM 1419
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|748304337|gb|KIH42235.1| (integrase core domain protein [Ancylostoma duodenale])

HSP 1 Score: 81.2629 bits (199), Expect = 5.033e-17
Identity = 38/103 (36.89%), Postives = 59/103 (57.28%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQ-TLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            + LFTC+ TSA+H+E++ + +  EF+  LR+ I   G P++I  DN+  F + N  LQ  + N D  K     ++   I WKF+T  +PW   F ER+  +FK
Sbjct:   40 ICLFTCMATSAVHLELVHNNTAFEFLLALRRFIARRGTPDLIISDNATTFTSGNDALQKVIYNKDTIKRLSSQFANRRITWKFNTPLSPWKGGFYERLVGLFK 142
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954377984|gb|KRY43651.1| (hypothetical protein T03_6895 [Trichinella britovi])

HSP 1 Score: 80.4925 bits (197), Expect = 1.077e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct:  111 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELKQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 207
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|597865463|gb|EYC14861.1| (hypothetical protein Y032_0039g49 [Ancylostoma ceylanicum])

HSP 1 Score: 80.4925 bits (197), Expect = 1.207e-15
Identity = 38/103 (36.89%), Postives = 59/103 (57.28%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQT-LKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            + LFTC+ T A+H+E++ + +T EF+  LR+ I   G P++I  DN+  F + N  LQ  + N D  K     ++   I WKF+T  +PW   F ER+  +FK
Sbjct: 1317 ICLFTCMATRAVHLELVHNNTTYEFLLALRRFIARRGTPDLIISDNATTFTSGNDALQKIIYNKDTIKKLSAQFANRRITWKFNTPLSPWKGGFYERLVGLFK 1419
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954605939|gb|KRZ82006.1| (hypothetical protein T08_2963 [Trichinella sp. T8])

HSP 1 Score: 80.4925 bits (197), Expect = 1.354e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct: 1215 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELKQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1311
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954605949|gb|KRZ82011.1| (hypothetical protein T08_16631, partial [Trichinella sp. T8])

HSP 1 Score: 80.4925 bits (197), Expect = 1.354e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct: 1238 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELKQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1334
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954605947|gb|KRZ82010.1| (hypothetical protein T08_13270, partial [Trichinella sp. T8])

HSP 1 Score: 80.4925 bits (197), Expect = 1.354e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct: 1238 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELKQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1334
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|339257582|ref|XP_003369834.1| (conserved hypothetical protein [Trichinella spiralis] >gi|316962331|gb|EFV48605.1| conserved hypothetical protein [Trichinella spiralis])

HSP 1 Score: 80.1073 bits (196), Expect = 1.383e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct:  264 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 360
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BLAST of EMLSAG00000001153 vs. nr
Match: gi|954363910|gb|KRY30670.1| (hypothetical protein T03_16191, partial [Trichinella britovi])

HSP 1 Score: 78.5666 bits (192), Expect = 1.447e-15
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 0 
Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            LFTC+ + A+H+E +   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct:   94 LFTCMASRAVHLEQVPEMTTARVMQALRRFIARRGRPEIIQSDNFRSFEAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 188
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954376516|gb|KRY42408.1| (hypothetical protein T01_3074 [Trichinella spiralis])

HSP 1 Score: 80.4925 bits (197), Expect = 1.450e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct:  489 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 585
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|339233598|ref|XP_003381916.1| (putative integrase core domain protein [Trichinella spiralis] >gi|316979212|gb|EFV62034.1| putative integrase core domain protein [Trichinella spiralis])

HSP 1 Score: 80.4925 bits (197), Expect = 1.463e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct:  674 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 770
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001153 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001153 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 19
Match NameE-valueIdentityDescription
gi|592893579|gb|GAXK01064796.1|1.593e-422.86TSA: Calanus finmarchicus comp4336892_c0_seq2 tran... [more]
gi|592893580|gb|GAXK01064795.1|1.754e-422.86TSA: Calanus finmarchicus comp4336892_c0_seq1 tran... [more]
gi|592823516|gb|GAXK01131052.1|5.964e-422.77TSA: Calanus finmarchicus comp3507114_c0_seq1 tran... [more]
gi|592935729|gb|GAXK01022824.1|6.418e-422.86TSA: Calanus finmarchicus comp1637438_c0_seq1 tran... [more]
gi|592884735|gb|GAXK01073640.1|1.919e-332.69TSA: Calanus finmarchicus comp3167281_c0_seq1 tran... [more]
gi|592880223|gb|GAXK01077678.1|2.154e-321.88TSA: Calanus finmarchicus comp5163893_c0_seq1 tran... [more]
gi|592917301|gb|GAXK01041074.1|2.757e-324.29TSA: Calanus finmarchicus comp7409526_c0_seq1 tran... [more]
gi|592868284|gb|GAXK01089278.1|3.415e-324.07TSA: Calanus finmarchicus comp5307518_c0_seq1 tran... [more]
gi|592800806|gb|GAXK01153762.1|5.839e-327.69TSA: Calanus finmarchicus comp3388558_c0_seq1 tran... [more]
gi|592858944|gb|GAXK01098618.1|8.890e-322.58TSA: Calanus finmarchicus comp2801899_c0_seq1 tran... [more]

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BLAST of EMLSAG00000001153 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000011534.030e-73100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1190:9208... [more]
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BLAST of EMLSAG00000001153 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 20
Match NameE-valueIdentityDescription
gb|KFM60670.1|6.174e-1638.24hypothetical protein X975_07709, partial [Stegodyp... [more]
gb|KFM68396.1|5.298e-1436.27hypothetical protein X975_24834, partial [Stegodyp... [more]
gb|KFM74603.1|6.434e-1436.27putative RNA-directed DNA polymerase from transpos... [more]
gb|KFM59784.1|7.124e-1436.27hypothetical protein X975_08509, partial [Stegodyp... [more]
gb|KFM62154.1|3.203e-1334.02hypothetical protein X975_06179, partial [Stegodyp... [more]
gb|KXZ75531.1|4.244e-1335.87hypothetical protein TcasGA2_TC033491 [Tribolium c... [more]
gb|EFA09479.1|5.153e-1231.13hypothetical protein TcasGA2_TC010973 [Tribolium c... [more]
gb|KFM75025.1|6.484e-1134.83Jerky-like protein, partial [Stegodyphus mimosarum... [more]
gb|KFM75559.1|1.954e-1028.87hypothetical protein X975_18538, partial [Stegodyp... [more]
gb|KFM70593.1|2.371e-1028.87hypothetical protein X975_21762, partial [Stegodyp... [more]

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BLAST of EMLSAG00000001153 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|748304337|gb|KIH42235.1|5.033e-1736.89integrase core domain protein [Ancylostoma duodena... [more]
gi|954377984|gb|KRY43651.1|1.077e-1538.78hypothetical protein T03_6895 [Trichinella britovi... [more]
gi|597865463|gb|EYC14861.1|1.207e-1536.89hypothetical protein Y032_0039g49 [Ancylostoma cey... [more]
gi|954605939|gb|KRZ82006.1|1.354e-1538.78hypothetical protein T08_2963 [Trichinella sp. T8][more]
gi|954605949|gb|KRZ82011.1|1.354e-1538.78hypothetical protein T08_16631, partial [Trichinel... [more]
gi|954605947|gb|KRZ82010.1|1.354e-1538.78hypothetical protein T08_13270, partial [Trichinel... [more]
gi|339257582|ref|XP_003369834.1|1.383e-1538.78conserved hypothetical protein [Trichinella spiral... [more]
gi|954363910|gb|KRY30670.1|1.447e-1539.58hypothetical protein T03_16191, partial [Trichinel... [more]
gi|954376516|gb|KRY42408.1|1.450e-1538.78hypothetical protein T01_3074 [Trichinella spirali... [more]
gi|339233598|ref|XP_003381916.1|1.463e-1538.78putative integrase core domain protein [Trichinell... [more]

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BLAST of EMLSAG00000001153 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1190supercontigLSalAtl2s1190:92088..92396 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s1190-processed-gene-0.16
Biotypeprotein_coding
EvidenceIEA
Noteintegrase core domain protein [Ancylostoma duodenale]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001153 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001153EMLSAT00000001153-697000Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1190:92088..92396-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001153-683919 ID=EMLSAG00000001153-683919|Name=EMLSAG00000001153|organism=Lepeophtheirus salmonis|type=gene|length=309bp|location=Sequence derived from alignment at LSalAtl2s1190:92088..92396- (Lepeophtheirus salmonis)
ATGGCTTTATTTACATGCCTTCATACGAGTGCTATCCACGTTGAGATAAT
TGAATCTCGTTCTACACGAGAGTTTATACAAAATCTCAGAAAATGCATTG
GCCTATATGGCAAACCTGAAATTATCTACTGTGATAATTCTCGTAATTTT
GTAACCTCAAATAAGCAACTACAAACACTTAAAAATATGGACTTTAATAA
AGTTCAAGAGGAGAATTATTCAGGGGAATATATTGAATGGAAATTCAGTA
CCTCTGAGGCACCTTGGACCAATCAATTCACAGAACGTATGGAGGCTATA
TTCAAATAG
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