EMLSAG00000001164, EMLSAG00000001164-683930 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001164 vs. C. finmarchicus
Match: gi|592881183|gb|GAXK01076718.1| (TSA: Calanus finmarchicus comp99595_c0_seq1 transcribed RNA sequence) HSP 1 Score: 49.6766 bits (117), Expect = 2.984e-7 Identity = 26/80 (32.50%), Postives = 45/80 (56.25%), Query Frame = 0 Query: 19 ERRVFIALPIAQNDIRKSSKDNFSSGIHEVECPDIIGLCKFMLVSKSVEPSSIHTNYGPCVGKKSLFRLELSDVFKFAMC 98 ++ + I L IAQ+D+ + + +HE++ +IG K M + K VE SI++N P V ++ + +LS VFK A+ Sbjct: 568 DKGILITLSIAQDDLIELIHHTAGTFVHEIQSWFLIGFGKSMSIRKFVESFSINSNNNPGVRQQFILNFKLSGVFKLALS 807
BLAST of EMLSAG00000001164 vs. C. finmarchicus
Match: gi|592832316|gb|GAXK01125228.1| (TSA: Calanus finmarchicus comp24002_c0_seq2 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 1.987e+0 Identity = 24/92 (26.09%), Postives = 42/92 (45.65%), Query Frame = 0 Query: 8 SIKSYARLTLAERRVFIALP-----IAQN---DIRKSSKDNFSSGIHEVECPDIIGLCKFMLVSKSVEPSSIHTNYGPCVGKKSLFRLELSD 91 S K A+++LA++R P I Q D R+ N + + E ++G+C+ +L + + P+ T+ P SL ELS+ Sbjct: 249 SNKVLAKVSLADKRALHLDPDRHRLIQQQVLLDYRRQPSQNVEAILARSE--QVMGICQGILNGEMITPTYTTTSLSPATSLPSLLEPELSN 518
BLAST of EMLSAG00000001164 vs. C. finmarchicus
Match: gi|592832317|gb|GAXK01125227.1| (TSA: Calanus finmarchicus comp24002_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 1.989e+0 Identity = 24/92 (26.09%), Postives = 42/92 (45.65%), Query Frame = 0 Query: 8 SIKSYARLTLAERRVFIALP-----IAQN---DIRKSSKDNFSSGIHEVECPDIIGLCKFMLVSKSVEPSSIHTNYGPCVGKKSLFRLELSD 91 S K A+++LA++R P I Q D R+ N + + E ++G+C+ +L + + P+ T+ P SL ELS+ Sbjct: 249 SNKVLAKVSLADKRALHLDPDRHRLIQQQVLLDYRRQPSQNVEAILARSE--QVMGICQGILNGEMITPTYTTTSLSPATSLPSLLEPELSN 518
BLAST of EMLSAG00000001164 vs. L. salmonis peptides
Match: EMLSAP00000001164 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1193:6883:7256:-1 gene:EMLSAG00000001164 transcript:EMLSAT00000001164 description:"maker-LSalAtl2s1193-snap-gene-0.30") HSP 1 Score: 229.95 bits (585), Expect = 1.017e-78 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 Query: 1 MNKNESVSIKSYARLTLAERRVFIALPIAQNDIRKSSKDNFSSGIHEVECPDIIGLCKFMLVSKSVEPSSIHTNYGPCVGKKSLFRLELSDVFKFAMCLSADDKRGRGGKGL 112 MNKNESVSIKSYARLTLAERRVFIALPIAQNDIRKSSKDNFSSGIHEVECPDIIGLCKFMLVSKSVEPSSIHTNYGPCVGKKSLFRLELSDVFKFAMCLSADDKRGRGGKGL Sbjct: 1 MNKNESVSIKSYARLTLAERRVFIALPIAQNDIRKSSKDNFSSGIHEVECPDIIGLCKFMLVSKSVEPSSIHTNYGPCVGKKSLFRLELSDVFKFAMCLSADDKRGRGGKGL 112 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001164 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001164 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 3
BLAST of EMLSAG00000001164 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001164 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001164 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001164 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001164 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1193:6883..7256- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001164-683930 ID=EMLSAG00000001164-683930|Name=EMLSAG00000001164|organism=Lepeophtheirus salmonis|type=gene|length=374bp|location=Sequence derived from alignment at LSalAtl2s1193:6883..7256- (Lepeophtheirus salmonis)back to top Add to Basket
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