EMLSAG00000001265, EMLSAG00000001265-684031 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001265
Unique NameEMLSAG00000001265-684031
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000001265 vs. L. salmonis peptides
Match: EMLSAP00000001265 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1208:1077:6043:1 gene:EMLSAG00000001265 transcript:EMLSAT00000001265 description:"maker-LSalAtl2s1208-augustus-gene-0.11")

HSP 1 Score: 119.783 bits (299), Expect = 4.993e-37
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 
Query:    1 MHTMKILLLFYVGTNRIWRTKELYRRRQPMISQIIIIYYITKPLLIRGQVLMMPLNPFLT 60
            MHTMKILLLFYVGTNRIWRTKELYRRRQPMISQIIIIYYITKPLLIRGQVLMMPLNPFLT
Sbjct:    1 MHTMKILLLFYVGTNRIWRTKELYRRRQPMISQIIIIYYITKPLLIRGQVLMMPLNPFLT 60
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001265 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001265 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001265 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000012654.993e-37100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1208:1077... [more]
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BLAST of EMLSAG00000001265 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001265 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001265 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001265 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1208supercontigLSalAtl2s1208:1077..6043 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1208-augustus-gene-0.11
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001265 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001265EMLSAT00000001265-697112Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1208:1077..6043+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001265-684031 ID=EMLSAG00000001265-684031|Name=EMLSAG00000001265|organism=Lepeophtheirus salmonis|type=gene|length=4967bp|location=Sequence derived from alignment at LSalAtl2s1208:1077..6043+ (Lepeophtheirus salmonis)
CAACTACTTTCGATCTTGGTACCCATTTGCCTAGTCTCGAGGATTGATAT
ATTGAGACTAAATCCAGATTTTCATAAAAATTGGAGAATATCTAGTGTTG
GCAAATTTTTATATTTGATCAGTGTTATCTAACACAAAAAATATTTTTTC
TTTGTTTTTTAACTCCTCAACTATGTACATATATTATCAAATGGTTAAAT
CTGGAGCTAACGTTTTCTGGCCACATGATATTTTTATAAAATCCCATTAT
TCTTGAGTCTACTGTCAGGAATAATGTTTCAGTCACATCCCTGATAGAAA
TAACGTCAGCATTGATCAAAGCAAGCAACGCTGATGTAAAGAAGATTAAT
TTAAGTTATGTTCAGGCTACAAATATCGTATTGAAAGCGTTACTAGTATT
GGGAAACAAATTGGAAGTTCCTGGAAACCTACATTCATTGCACTGGGGTA
AAAAAAATCATGAAAACTCTAGAAAATCCTCATTGTTTGGAAGAATTATT
ACCCATAATTGGCTATCATGAATAGTGATGTAAATCGTATATATTTTTTT
ACCTTGCCGTTTATTGTAAATTGGGAATCTGAAGAATGAATTTTCTCTTC
CTAGCTGTTTCCGAGCTGCATATGTGGTATTTGACAGAAGAATTGGTTCA
ATTAGCATTGTACAGTGAGTCAATCGATGAAGCGGCAAAAAGGAGAATTA
CAATCAAAGTTTTTGAAATAGAAAACTCATTGAAATGATTAAACATACAT
GAGAATGGGTTTAGAAAATCCAACACTTACACTCGTACTTAAAGAAAATA
AGACTGATTTGTCAGAATTCTTTGAGCCCCATAGTTTGGCATTATTTCGA
ATATTAAATATCAATTCTGATTTTTTTGGACACCTGTATTTAAATGGAAA
TCAAACAGTATTTATGTTAGCATAAAATCTATCGCGTAAAACCTATCTGT
TGTAAGAGAGTGGAGTGAAGAATTGTAATGACTATATAGACAAATCAAAA
AATGATCAAAACTTTCAAAACGTACTACAAGTAGTCGTGGTTGCATACCA
AACCAGCAAAAAAATCCGTTGGATAATAAGTGATTGTATCCCAACTCCAT
GTGATTGCAATATGTGCATGGAAGAACCACAAAGCACATACCCCCTTATT
AACAGATGCCCATCGTTCTGATATGAGAGATACCAAACCATGTAAAAAGA
GGAGTAAGATCTTCATATTCTTAAACTTATCAAAGGTACAAAAATGAAAT
AAATTATTGATAATAACTATAAAATTAAGTAGGACTTAAGATCAATTTCT
GCTGTAGTAACACATATACGTGGTTGTATTCTTTGCCGTATGTATGTATA
GTTTTGTAATGTATGCATATATGTACTATTTTATAATGTATATATNATAT
ATACTATGGTAAACAGCAATAGATTATTAACTAACTGTATGTGATTAAAA
CATATATTTAACGAAAATAGGAATTATTCAAATTTCTTAAAGAATGTTTA
TGTTATGAAATAAAACGAACATAATCAAATATGTTTAATCCAAATGTGCC
AATATAAGATCCTCATCCTCATCAAATTTTAAAAAGCTGTTCTAAAGGTT
AAATCTCAAGAATAGAACAAACGCAGATCACATCCTGTAATTTTTTGAAA
AAAGTGGGCAGAGTGATCATCCTAATATATGAGCGTACACTTTTTGCATT
TATACGGACAAATTTAATTGTGAATATTGTAATTTGAATTATATACTATT
TTTTACAGATTTTCGTGAGAAAAGGATCACATACAAGCCTAAAGATGGAT
CTAAAGATGAAAGAATTCAACTTCAGGTAAAATGATCTTATCATTGATTT
AATTAATCTAGTAAATTTTATAAACTTCTAAGTTGTCTAAATTCAATTAT
TTTGAACTAATTCGTTTGCTGTTTAAAATTAAACTGTTCTGTAAGTTGTT
CAATTTCATAAAAAATGTACAGATATGGGCAGCAAAATCTGGACTGTTGA
TTAATGTTTATTTTCTCATTACTATGAAAAGGTTTAGTTATTATTTTCTG
ATATTCTGTTTCCGCTGTCCTTTTTACATAAGCAAACTGTACAAATCATT
TAGTCATTTCATCATCATGAACGAACAGCAAGGAAAGACATATCATATTT
ATGATCTCCTAGATGCCGGAGTTGATGTGATGAAGATTACGGACATTGTT
AAGTACTCTAGGAGCATGGTTTTTAAGTTGGCCAATAAAAATAAAAATGG
AGAAGACCTTTAAAGAGGGATACGAAGTTCTTATTGAGTTTTGGAGAATA
ACATAAAGGAGAATCCCACTAAGTCGATGAATCGCCTTATTTGTGGCTCC
YAGGACCATCAGGAGGCAATGAAGCACAACTTTGGACTAGTTTATTTCAC
AAGAACCCCACACCATCTTCTGATATAGGGCATGATAGCCAGGAGGCTTG
AGAGATGGAAGAAAATCATGACATGGATCAAGGGAATTCAGTCAATTGTG
AAAATGTTATCATCGGAAAAGAAGAATTTCACAGTTGATCAATTCCACAA
CCGCTGGAACGACCACTAGCTTGCAGAAGCAAAAAAAGAGGTCCAAGGGT
GTTATCACACCAAATATCTGACCCAAACAATGGTATTCGACGTTATGCCC
TTTGATGGAAAGAAGATGCCTCTGTTCTTTTTCAAGGCTGGAGAGAAAAT
TGGCCTACTATAAGGTGCTTAAGTACACCATCTTGCCATACCTGAATACC
AACTATCTGAAGGATAACTACGTGTGGGCTCAGGACGGCGTTCCCTCTCA
CACATCTGCCAATTGCCAAAAGTTAACATTACTCGATTCTGGTCAAAAAG
GTTATGACCCCCTTCCTAACCAGATTTTAACCCACAGGAATTTTATATAT
GGGCAATTTGGAGAGGGAAACCAGCAGGACCTCACACCCAAATATAGCCT
CACTGAAGTCTTCCATAGTGTCTGCATGGGACAACTTGTCAGAGGAAATT
GTCATCAACTCCTACATGCCCTTCATGCGAGTGTCAATGCTCTGATTGAT
AATGAAGGTGGCCATATTGAGTGAAAACAGTTTTGCAAAAACCTTGTCTA
CATGCTTTGTTAACATTATTTTTTGCCTATTATTGAAAGTATAAAATTAT
TGATGTATTTCTAAGTCCATCTCTCGAATCCACGTTTTGCTGCCCTACCC
TCTATACGCCATCAATTGTTTTCACGTGACGTCACAATGAATTGCCAACC
CCACTTAGGCGGAGGTTTTTATTTTATAAAATTTAATACATATCCTCCTC
CTCTTTTGGGTTGATTGTTCATTTTTATTTCCATGAAAACGCTCTATAAC
TGATTAACGTCATACATGACATGTCTGCCGATCCACAGCGCTAGTATCGA
GACAAAACCTTATAGGACATGGTAAGATAATTATTAATGAAATTCTCAAA
TATTGTGAAAACTACTTGGTCAATGTCATCTCTATATCACAAAAAAATTA
TGCTTGCTACAAAATAGCTTCCTATAATGATTTATGTAGAAAGAAAGACC
TATTCTTTTTTTGAAAATATTGACTTCTGAAGAGAGCTCCATGAAAATCT
AAGTTTATAAAATTATGAAATTGACTACGAAAAAAATGAAACAGACAAAT
TTAAAAGATACTTATATAAGTTAAGTTTATTTTTTCTAAAATTTCTTTAG
TCTTTATTGAAAGATTGCTAACTACAGAACTGCTGAAAGATTTATAGTAA
AGTAAATCTTCACTCTTTGTTTAATTCCCTATTTATATTTTGTAGTTCTG
ATCTGATTTGTGGAGCTCAAAAAAATTATTTCATTTGAAGAAATTACTCA
CAAATTTTTCGAGTTGATGCAATATGCTTGGTCAAAATTTGTAAATAACT
CAAAAAAATTTATTATGACTATTCTGTTGAAATATCACTGACCAAAGGAC
CATAATAGATTAGCTTAACTGAAGATACTTTATCAAATTCTTTGAATAAT
TATTCTAACTTAAATTCTGTGTAGATTGAGAACCATTAGTTTGTCATAAA
TGAAACTTTCAATCCTGAAAACCTATTATTATTCACTACAAAAAAACCAC
CAATTTCGAAGATCTACTACTGATCGTTTTTCAAATAAATTCTGTCTTTC
GATTCAATTTTTATTTTCAACGTCTTTCTGTAACAGACTGAAAAATTATA
ATTATGTTTCAAAATCACTGACCATGTTCATTTCTTGTTAAATACTTTCA
CCGAACAATGTGATCCTATGTATCTAATACTTTTATGATGAATGTTAATT
AATTTAGAAAATCTCCTTTAGTTATGGGATACTGCAGGCCAAGAACGCTT
TCGTAGCTTAACTACTGCATTTCTTAGAGATGCCATGGGCTTCATCCTTG
TTTTTGATTTAACTGAAGAACAGTAGTTTTTATGACGTAACCACTTGGTT
AGATCATATACGAGCTCATGCATACTATGAAGATCCTTTTATTATTTTAT
GTGGGAACAAATCGGATTTGGAGAACGAAAGAGTTATATCGAAGGAGACA
GCCAATGATTTCGCAAATAATAATAATCTATTATATTACGAAACCTCTGC
TAATACGGGGGCAGGTTTTAATGATGCCATTGAATCCCTTCTTGACTTGA
TAATGGAGAGGATTAAAAGGGATGAGTTGGAGTATTCTTCCCACCAAAAG
TAAGAAATATATAAAAATTTTAATGCCTTGATTTGTAACTTCTTTTTTTT
TTTTTTTTGCAGTGTGAAAAAAAGAAGACTATCTTCCTTTTTAAATAACC
ACTTAAAGAATGAAGACAAATCCTTCAAATATTGTTGTTAAATTGCAATA
AATCAAAGAAGCAAACTTTTGAAGTTTGTGTCAGCACAGAAAATCAAGAT
GAATACTTACACAAAGTACAATTCAGTTCACCCTCTTAATTTGTAGCTTT
ATATCCTTTGATGACAA
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