EMLSAG00000001268, EMLSAG00000001268-684034 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001268 vs. L. salmonis peptides
Match: EMLSAP00000001268 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1209:52377:57511:-1 gene:EMLSAG00000001268 transcript:EMLSAT00000001268 description:"augustus_masked-LSalAtl2s1209-processed-gene-0.1") HSP 1 Score: 573.163 bits (1476), Expect = 0.000e+0 Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0 Query: 1 MSNIDNYPDFEDYQDPLTVETYEVTTRDLILFSIRIAVCLIFLVCTFYVLISGLFLHKYIKNWKLCLVTCGALSAWLGLSVYSDHIDEYWAGGFVIHYQTRNSIFQWFLNLFHGLTLFLTLLLLGHLADFQKRGCWLFLVALTIIVPIIYSVVIILVDLYAKKRFAGRKWSAFVVLFRTGIYNVLNTLLLLSFLPRFCTSRLYGTYDEKRSSSVILISRWIFMFLLLHNLTDIAWGVIIALRFFLEDVINDTDFVLIQDIFDEVKFVLIVLAIPFSYAVSLAVKAVV 287 MSNIDNYPDFEDYQDPLTVETYEVTTRDLILFSIRIAVCLIFLVCTFYVLISGLFLHKYIKNWKLCLVTCGALSAWLGLSVYSDHIDEYWAGGFVIHYQTRNSIFQWFLNLFHGLTLFLTLLLLGHLADFQKRGCWLFLVALTIIVPIIYSVVIILVDLYAKKRFAGRKWSAFVVLFRTGIYNVLNTLLLLSFLPRFCTSRLYGTYDEKRSSSVILISRWIFMFLLLHNLTDIAWGVIIALRFFLEDVINDTDFVLIQDIFDEVKFVLIVLAIPFSYAVSLAVKAVV Sbjct: 1 MSNIDNYPDFEDYQDPLTVETYEVTTRDLILFSIRIAVCLIFLVCTFYVLISGLFLHKYIKNWKLCLVTCGALSAWLGLSVYSDHIDEYWAGGFVIHYQTRNSIFQWFLNLFHGLTLFLTLLLLGHLADFQKRGCWLFLVALTIIVPIIYSVVIILVDLYAKKRFAGRKWSAFVVLFRTGIYNVLNTLLLLSFLPRFCTSRLYGTYDEKRSSSVILISRWIFMFLLLHNLTDIAWGVIIALRFFLEDVINDTDFVLIQDIFDEVKFVLIVLAIPFSYAVSLAVKAVV 287
BLAST of EMLSAG00000001268 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1100_size62683-snap-gene-0.6 (protein:Tk09820 transcript:maker-scaffold1100_size62683-snap-gene-0.6-mRNA-1 annotation:"glutamate receptor kainate 2-like isoform x1") HSP 1 Score: 177.948 bits (450), Expect = 1.382e-50 Identity = 98/236 (41.53%), Postives = 152/236 (64.41%), Query Frame = 0 Query: 9 DFEDYQDPLTVETYEVTTRDLILFSIRIAVCLIFLVCTFYVLISGLFLHKYIKNWKL-CLVTCGALSAWLGLSVYSDHIDEYWAGGFVIHYQTRNSIFQWFLNLFHGLTLFLTLLLLGHLADFQKRGCWLFLVALTIIVPIIYSVVIILVDLYAKKRFAGR-KWSAFVVLFRTGIYNVLNTLLLLSFLPRFCTSRLYGTYDEKRSSSVILISRWIFMFLLLHNLTDIA-WGVIIAL 241 D++DY++ YE+ D R V LIFL+ V ++ + K +KNW+L CLV+ +L WLG++ Y DHIDEY+ + Q R SI+ NL HG+TL++ +LLL HL+DFQ RG WL V++ ++VP+++S+V++++DL + +W+ + R +YN + ++LL+ F RFCTSRLYGTY+E RS+ V+++SRW+F FLLLHNLT +A +G +A+ Sbjct: 43 DYDDYEELYPQLEYELKAIDWATMITRGVVILIFLISYMLVFVN-VARGKRMKNWRLYCLVSL-SLLCWLGMAFYQDHIDEYFVHEVTLFPQPR-SIYWCVRNLLHGITLYMIVLLLSHLSDFQHRGIWLMFVSMVVLVPLVFSIVVLIIDLRVPEESRRSWEWNIGISAMRIFLYNFVTSILLVVFTARFCTSRLYGTYEESRSTLVVVVSRWVFAFLLLHNLTAMASFGTFVAI 275
BLAST of EMLSAG00000001268 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold1100_size62683-processed-gene-0.3 (protein:Tk09822 transcript:snap_masked-scaffold1100_size62683-processed-gene-0.3-mRNA-1 annotation:"lipoma hmgic fusion partner-like 3 isoform 1") HSP 1 Score: 85.5001 bits (210), Expect = 1.742e-19 Identity = 45/84 (53.57%), Postives = 62/84 (73.81%), Query Frame = 0 Query: 196 RFCTSRLYGTYDEKRSSSVILISRWIFMFLLLHNLTDIA-WGVIIALRFFLEDVIND-TDFVLIQDIFDEVKFVLIVLAIPFSY 277 +FCTSRLYGTY+E RS+ V+++SRW+F FLLLHNLT +A +G +A+ + + ++ T+ +L I DEV F LIVLAIP SY Sbjct: 29 QFCTSRLYGTYEESRSTLVVVVSRWVFAFLLLHNLTAMASFGTFVAI--LVPGLTSETTNAILAHRILDEVAFFLIVLAIPVSY 110 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001268 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001268 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000001268 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001268 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001268 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001268 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001268 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1209:52377..57511- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001268-684034 ID=EMLSAG00000001268-684034|Name=EMLSAG00000001268|organism=Lepeophtheirus salmonis|type=gene|length=5135bp|location=Sequence derived from alignment at LSalAtl2s1209:52377..57511- (Lepeophtheirus salmonis)back to top Add to Basket
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