EMLSAG00000003579, EMLSAG00000003579-686345 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003579
Unique NameEMLSAG00000003579-686345
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000003579 vs. L. salmonis peptides
Match: EMLSAP00000003579 (pep:novel supercontig:LSalAtl2s:LSalAtl2s196:119490:121312:-1 gene:EMLSAG00000003579 transcript:EMLSAT00000003579 description:"maker-LSalAtl2s196-augustus-gene-1.10")

HSP 1 Score: 447.973 bits (1151), Expect = 2.636e-161
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 
Query:    1 MTDGAENEDKEEDGDDAEETNGNPISPASPLTPQNQPIFTISSPMSNSTSMNYPSPFEPPPDYDSWSATPSTSCSYCSSSNTAXSTTQFSRNRRSXCYYYPGPPPPPRWDIIPENVEQNTHQSQLGNGTRDIRWVRVSKNSFVIKRWALILLILVMLIMVSLLFGITLQHVQLLRSVAHLHKDERSQSIQAITESSVLKHRPIHHSFGRNTYSEKDWK 218
            MTDGAENEDKEEDGDDAEETNGNPISPASPLTPQNQPIFTISSPMSNSTSMNYPSPFEPPPDYDSWSATPSTSCSYCSSSNTAXSTTQFSRNRRSXCYYYPGPPPPPRWDIIPENVEQNTHQSQLGNGTRDIRWVRVSKNSFVIKRWALILLILVMLIMVSLLFGITLQHVQLLRSVAHLHKDERSQSIQAITESSVLKHRPIHHSFGRNTYSEKDWK
Sbjct:    1 MTDGAENEDKEEDGDDAEETNGNPISPASPLTPQNQPIFTISSPMSNSTSMNYPSPFEPPPDYDSWSATPSTSCSYCSSSNTAXSTTQFSRNRRSXCYYYPGPPPPPRWDIIPENVEQNTHQSQLGNGTRDIRWVRVSKNSFVIKRWALILLILVMLIMVSLLFGITLQHVQLLRSVAHLHKDERSQSIQAITESSVLKHRPIHHSFGRNTYSEKDWK 218
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003579 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003579 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003579 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000035792.636e-161100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s196:11949... [more]
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BLAST of EMLSAG00000003579 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003579 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003579 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003579 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s196supercontigLSalAtl2s196:119490..121312 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s196-augustus-gene-1.10
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003579 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003579EMLSAT00000003579-699426Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s196:119490..121312-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003579-686345 ID=EMLSAG00000003579-686345|Name=EMLSAG00000003579|organism=Lepeophtheirus salmonis|type=gene|length=1823bp|location=Sequence derived from alignment at LSalAtl2s196:119490..121312- (Lepeophtheirus salmonis)
ATGACGGATGGAGCTGAAAATGAGGACAAGGAAGAGGATGGTGATGATGC
AGAGGAAACAAACGGAAATCCAATTTCTCCTGCCTCCCCCCTCACCCCTC
AAAACCAACCCATTTTCACCATATCCTCCCCCATGAGCAACTCAACAAGT
ATGAACTACCCCTCACCCTTTGAGCCCCCTCCCGACTACGACTCCTGGTC
TGCAACTCCCTCCACATCCTGCAGCTACTGTTCCTCTTCCAATACTGCGS
CTTCCACTACTCAATTCTCACGCAATAGAAGAAGCRGTTGCTACTACTAC
CCTGGGCCGCCTCCKCCGCCACGATGGGATATTATACCTGAAAACGTTGA
GCAGAATACTCATCAGTCCCAATTAGGGAATGGTACTAGGGACATTCGGT
GGGTGAGAGTGAGTAAAAACAGCTTTGTCATCAAGCGGTGGGCTCTCATC
CTTCTCATACTCGTGATGCTGATCATGGTTTCTCTTCTCTTTGGTAAGTT
AATTTAGTATGTACAAACAAGTAACAACCTAATTGCTCAGGTTTTTCTCT
TTCATACGCACAAACATCACAGGCATTACTCTTCAACACGTTCAACTCCT
TCGAAGTGTGGCTCATCTTCATAAAGATGAGAGGTCACAGTCCATTCAGG
GTAAGAGTTCTTTGTGATTCATAATACTAACGAGGACTCCTGAGTTTTTC
ACACTTTTAAAAAAAAAACCAAGGATTTCCCTTGGAATCAAAAACAAAGC
TCTATTAGTAATCTACATTAATAAAGCAAAGTAAATCCGTACAGTCATTT
TTGAGTTTATCAGAGACTGCGAAGAAAAAGAATACAATCAAGCGTGTGCG
TCAAATTAAAAAGAAAAGAGAGTATTTATATGTATAGATATATAAAACAC
TAGAAACCTGTAATCGACGACTCAAGCGCGCCCGCTACAAATGGGGAAGA
AGAACTGACAATTACTATAATGATATAACAAGTTCCAAAGGGCATTTGTG
GACCATATGTCAAATTTTAATACAAAACAAAAGTATTTATTAGATTTTAG
ATTTAAATAGTCAAGCATATAGCTATATAAAAAATCAGACCTTTGAAATT
CATGTGTCACAGTTTTTATGAAATTATTGTATTCCAAAGTCAAACCTATC
ACAGGCACCTGTTATAAGTATCTAATCTAATCTAAGGAATGGTTGTTTTT
TAAATAAAAATATGACAATGCTCAGTTTTTCTATCCTATTTGTAATTTAT
TTGGGCCTTTGCATTGTATTATATGTAGATGTTTAGGTAAACTCATAATT
TATACATCTCTATACTGTATCAAATATGTGTTAAGATACATTCTTAACAA
CGACCTCAGGTAGCAGCAGCCAGGTAGCGTCCTGGAGACTATTGAATCCC
TGGCTTGTCACGTTATATTAAAAAAATTATCCAGTTCTTATTATTATTCT
TTTGAGAAGAGAACATTTAATTATTGAGTAACTAAGTGTCAGATTGTTCA
TGAAAAACAAAGAGTTATTTTCTATATTATTAAAGCAATCCGGGCTACCA
GAGCATCCGCGAGATTATATGGTTTTAAAAAATGCATAAAATGTTTTTTT
CATGAATTTTTTCCCTGCGAGAGGAATAATTTTTCAATTGATCTAAGAGG
ACTACAGCTCCTCCAGTCCCTATTAAAAAAAAACAACAACTTCTCTAAAT
TTAAATAATAATGTTAAATTTTCTTTATCCTCTCTAGCAATTACTGAATC
CTCCGTCCTCAAACATCGTCCTATACATCATTCCTTTGGAAGGAATACTT
ATTCAGAAAAAGATTGGAAGTAA
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