EMLSAG00000006453, EMLSAG00000006453-689219 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006453 vs. C. finmarchicus
Match: gi|592955346|gb|GAXK01003210.1| (TSA: Calanus finmarchicus comp187791_c0_seq1 transcribed RNA sequence) HSP 1 Score: 136.346 bits (342), Expect = 6.161e-35 Identity = 65/130 (50.00%), Postives = 86/130 (66.15%), Query Frame = 0 Query: 4 AFKLVPLLSSILVFVASSPKQKGFCWEPGSNPFVGQPKTERLDSDRVRINWSEIFNKNGNCKNVDFLIKSNPRHSPSDYKLSDFTQKGQTSATLMVTDGEDFVFQIIAREDKRPKYGIEYKYSQMVTSYF 133 A+ ++PLL + + FCW+P NPF G P TER+DS VR+ W +F K C++V+FLIKS+P +PS+YKLSD T KG+ SAT+ V GEDF+FQ+IARE+K GIEY YS+ TS F Sbjct: 882 AWVVIPLLCT---------QVSTFCWKPNHNPFTGAPDTERVDSTTVRVTWENVFPKGRGCEDVEFLIKSHPLDTPSNYKLSDLTLKGKRSATMAVPQGEDFIFQVIARENKGTGIGIEYAYSRPATSVF 1244 HSP 2 Score: 114.005 bits (284), Expect = 2.889e-27 Identity = 64/155 (41.29%), Postives = 92/155 (59.35%), Query Frame = 0 Query: 199 EFIGYMNKNSVRYVHEFMRDKKAC----SEQSVGFIVSSPKTSTVKCCSSPWGGN-----CYIEFAECDGSCIPQDWISDNWPDCLDGSDEPXXXXXXXXXXXXXXQCVSCGXNXXXAVSLCSDKNYI--HLT-NCVKELLGDGNCSLCISDYFE 341 +FI +MNKN++ V F+ +KK+C S Q G +V KCCS+PWG N CY +FA CDG CIP DW+SD WPDC+DG+DE ++ G+ + +L CV C A LC + + + LT NCV+ +LG G C++CI ++ + Sbjct: 84 QFIKHMNKNALATVKTFVGEKKSCAGGYSGQEAGHLVEG--EGETKCCSTPWGDNSPQAVCYEQFARCDGRCIPHDWVSDGWPDCMDGADE-ATLTIDGKVMPYQLGCVHCAGVVLSAAFLCIESSSLTSGLTRNCVENILGPGQCNVCIQEFMD 539
BLAST of EMLSAG00000006453 vs. C. finmarchicus
Match: gi|592791449|gb|GAXK01163119.1| (TSA: Calanus finmarchicus comp3623268_c0_seq1 transcribed RNA sequence) HSP 1 Score: 56.9954 bits (136), Expect = 1.575e-8 Identity = 36/116 (31.03%), Postives = 64/116 (55.17%), Query Frame = 0 Query: 2 YSAFKLVPLLSSILVFVASSPKQKGFCWEPGSNP-FVGQPKTERLDSDRVRINWSEIFNKNGNCKNVDFLIKSNPRHSPSDYKLSDFTQKGQTSATLM-VTDGEDFVFQIIAREDK 115 +S + L+S IL+ +ASS +C G+NP + G PK E++ V+++W + + +C + ++K H+ +DY L+D + T+ +T E++ FQ+IAREDK Sbjct: 32 WSLIHQLALISHILLPLASS-----YCSGVGNNPHWSGAPKIEQVTLTSVKVSWHGLLQRE-DCAD-QLIVKHWKTHNANDYSLTDLLSVETNNYTVENLTTMEEYTFQVIAREDK 358
BLAST of EMLSAG00000006453 vs. C. finmarchicus
Match: gi|592759133|gb|GAXK01195280.1| (TSA: Calanus finmarchicus comp89200_c2_seq1 transcribed RNA sequence) HSP 1 Score: 56.9954 bits (136), Expect = 2.490e-8 Identity = 44/134 (32.84%), Postives = 75/134 (55.97%), Query Frame = 0 Query: 10 LLSSILVFVASS--PKQKGFCWEPGSNP-FVGQPKTERLDSDRVRINWSEIFNKNGNCKNVDFLIKSNPRHSPSDYKLSDFTQKGQTSATLMVTD---GEDFVFQIIAREDKRPKYGIEYK-YSQMVTSYFRED 136 +L+ I+ +A++ P Q +C G+NP F P +++ V+++W + + C + F++KS R +P+DYK+SD Q S +VTD +D+VFQ +AREDK GI K +++ +YFR + Sbjct: 497 MLNIIVTLLAATLQPAQ-AYCAGIGANPGFKDAPLVQQVTLTSVKVSWHGLVTR-AECAD-QFIVKSWNRRNPNDYKMSDLLPLNQFS--YIVTDLVPNQDYVFQAVAREDK----GILGKDWNKSPKAYFRTN 871
BLAST of EMLSAG00000006453 vs. C. finmarchicus
Match: gi|592759135|gb|GAXK01195278.1| (TSA: Calanus finmarchicus comp89200_c0_seq2 transcribed RNA sequence) HSP 1 Score: 56.6102 bits (135), Expect = 4.230e-8 Identity = 42/133 (31.58%), Postives = 75/133 (56.39%), Query Frame = 0 Query: 10 LLSSILVFVASSPK-QKGFCWEPGSNP-FVGQPKTERLDSDRVRINWSEIFNKNGNCKNVDFLIKSNPRHSPSDYKLSDFTQKGQTSATLMVTD---GEDFVFQIIAREDKRPKYGIEYK-YSQMVTSYFRED 136 +L+ I+ +A++ + + +C G+NP F P +++ V+++W + + C + F++KS R +P+DYK+SD Q S +VTD +D+VFQ +AREDK GI K +++ +YFR + Sbjct: 483 MLNIIVTLLAATLRPAQAYCAGIGANPGFKDAPLVQQVTLTSVKVSWHGLVTR-AECAD-QFIVKSWNRRNPNDYKMSDLLPLNQFS--YIVTDLVPNQDYVFQAVAREDK----GILGKDWNKSPKAYFRTN 857
BLAST of EMLSAG00000006453 vs. C. finmarchicus
Match: gi|592759136|gb|GAXK01195277.1| (TSA: Calanus finmarchicus comp89200_c0_seq1 transcribed RNA sequence) HSP 1 Score: 56.6102 bits (135), Expect = 4.865e-8 Identity = 42/133 (31.58%), Postives = 75/133 (56.39%), Query Frame = 0 Query: 10 LLSSILVFVASSPK-QKGFCWEPGSNP-FVGQPKTERLDSDRVRINWSEIFNKNGNCKNVDFLIKSNPRHSPSDYKLSDFTQKGQTSATLMVTD---GEDFVFQIIAREDKRPKYGIEYK-YSQMVTSYFRED 136 +L+ I+ +A++ + + +C G+NP F P +++ V+++W + + C + F++KS R +P+DYK+SD Q S +VTD +D+VFQ +AREDK GI K +++ +YFR + Sbjct: 612 MLNIIVTLLAATLRPAQAYCAGIGANPGFKDAPLVQQVTLTSVKVSWHGLVTR-AECAD-QFIVKSWNRRNPNDYKMSDLLPLNQFS--YIVTDLVPNQDYVFQAVAREDK----GILGKDWNKSPKAYFRTN 986
BLAST of EMLSAG00000006453 vs. C. finmarchicus
Match: gi|592847122|gb|GAXK01110422.1| (TSA: Calanus finmarchicus comp220589_c7_seq42 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 3.461e-2 Identity = 20/30 (66.67%), Postives = 20/30 (66.67%), Query Frame = 0 Query: 253 EFAECDGS-CIPQDWISDNWPDCLDGSDEP 281 EFA DGS CIP W D DCLDGSDEP Sbjct: 244 EFACADGSKCIPGRWFCDTSVDCLDGSDEP 333
BLAST of EMLSAG00000006453 vs. C. finmarchicus
Match: gi|592847124|gb|GAXK01110420.1| (TSA: Calanus finmarchicus comp220589_c7_seq40 transcribed RNA sequence) HSP 1 Score: 36.5798 bits (83), Expect = 3.618e-2 Identity = 20/30 (66.67%), Postives = 20/30 (66.67%), Query Frame = 0 Query: 253 EFAECDGS-CIPQDWISDNWPDCLDGSDEP 281 EFA DGS CIP W D DCLDGSDEP Sbjct: 244 EFACADGSKCIPGRWFCDTSVDCLDGSDEP 333
BLAST of EMLSAG00000006453 vs. C. finmarchicus
Match: gi|592759134|gb|GAXK01195279.1| (TSA: Calanus finmarchicus comp89200_c0_seq3 transcribed RNA sequence) HSP 1 Score: 37.7354 bits (86), Expect = 3.658e-2 Identity = 21/78 (26.92%), Postives = 45/78 (57.69%), Query Frame = 0 Query: 10 LLSSILVFVASSPK-QKGFCWEPGSNP-FVGQPKTERLDSDRVRINWSEIFNKNGNCKNVDFLIKSNPRHSPSDYKLS 85 +L+ I+ +A++ + + +C G+NP F P +++ V+++W + + C + F++KS R +P+DYK+S Sbjct: 1 MLNIIVTLLAATLRPAQAYCAGIGANPGFKDAPLVQQVTLTSVKVSWHGLVTR-AECAD-QFIVKSWNRRNPNDYKMS 228
BLAST of EMLSAG00000006453 vs. C. finmarchicus
Match: gi|592847170|gb|GAXK01110374.1| (TSA: Calanus finmarchicus comp220589_c5_seq33 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 3.694e-2 Identity = 20/30 (66.67%), Postives = 20/30 (66.67%), Query Frame = 0 Query: 253 EFAECDGS-CIPQDWISDNWPDCLDGSDEP 281 EFA DGS CIP W D DCLDGSDEP Sbjct: 27 EFACADGSKCIPGRWFCDTSVDCLDGSDEP 116
BLAST of EMLSAG00000006453 vs. C. finmarchicus
Match: gi|592847121|gb|GAXK01110423.1| (TSA: Calanus finmarchicus comp220589_c7_seq43 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 4.075e-2 Identity = 20/30 (66.67%), Postives = 20/30 (66.67%), Query Frame = 0 Query: 253 EFAECDGS-CIPQDWISDNWPDCLDGSDEP 281 EFA DGS CIP W D DCLDGSDEP Sbjct: 250 EFACADGSKCIPGRWFCDTSVDCLDGSDEP 339
BLAST of EMLSAG00000006453 vs. L. salmonis peptides
Match: EMLSAP00000006453 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3535:2974:4429:-1 gene:EMLSAG00000006453 transcript:EMLSAT00000006453 description:"augustus_masked-LSalAtl2s3535-processed-gene-0.0") HSP 1 Score: 694.115 bits (1790), Expect = 0.000e+0 Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0 Query: 1 MYSAFKLVPLLSSILVFVASSPKQKGFCWEPGSNPFVGQPKTERLDSDRVRINWSEIFNKNGNCKNVDFLIKSNPRHSPSDYKLSDFTQKGQTSATLMVTDGEDFVFQIIAREDKRPKYGIEYKYSQMVTSYFREDTAPDIGFKEVLTTEKLRVTKIKKSSLMTTTTPKYSRNAAKDKCVLPLKKFNSNNILSNKLLKEFIGYMNKNSVRYVHEFMRDKKACSEQSVGFIVSSPKTSTVKCCSSPWGGNCYIEFAECDGSCIPQDWISDNWPDCLDGSDEPELESLSGRSLSEELQCVSCGXNXXXAVSLCSDKNYIHLTNCVKELLGDGNCSLCISDYFE 341 MYSAFKLVPLLSSILVFVASSPKQKGFCWEPGSNPFVGQPKTERLDSDRVRINWSEIFNKNGNCKNVDFLIKSNPRHSPSDYKLSDFTQKGQTSATLMVTDGEDFVFQIIAREDKRPKYGIEYKYSQMVTSYFREDTAPDIGFKEVLTTEKLRVTKIKKSSLMTTTTPKYSRNAAKDKCVLPLKKFNSNNILSNKLLKEFIGYMNKNSVRYVHEFMRDKKACSEQSVGFIVSSPKTSTVKCCSSPWGGNCYIEFAECDGSCIPQDWISDNWPDCLDGSDEPELESLSGRSLSEELQCVSCGXNXXXAVSLCSDKNYIHLTNCVKELLGDGNCSLCISDYFE Sbjct: 1 MYSAFKLVPLLSSILVFVASSPKQKGFCWEPGSNPFVGQPKTERLDSDRVRINWSEIFNKNGNCKNVDFLIKSNPRHSPSDYKLSDFTQKGQTSATLMVTDGEDFVFQIIAREDKRPKYGIEYKYSQMVTSYFREDTAPDIGFKEVLTTEKLRVTKIKKSSLMTTTTPKYSRNAAKDKCVLPLKKFNSNNILSNKLLKEFIGYMNKNSVRYVHEFMRDKKACSEQSVGFIVSSPKTSTVKCCSSPWGGNCYIEFAECDGSCIPQDWISDNWPDCLDGSDEPELESLSGRSLSEELQCVSCGXNXXXAVSLCSDKNYIHLTNCVKELLGDGNCSLCISDYFE 341
BLAST of EMLSAG00000006453 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold25_size650667-processed-gene-5.22 (protein:Tk06721 transcript:snap_masked-scaffold25_size650667-processed-gene-5.22-mRNA-1 annotation:"hypothetical protein AaeL_AAEL007475") HSP 1 Score: 247.284 bits (630), Expect = 1.291e-74 Identity = 141/378 (37.30%), Postives = 200/378 (52.91%), Query Frame = 0 Query: 14 ILVFVASSPKQ--KGFCWEPGSNPFVGQPKTERLDSDRVRINWSEIFNKNGNCKNVDFLIKSNPRHSPSDYKLSDFTQKGQTSATLMVTDGEDFVFQIIAREDKRPKYGIEYKYSQMVTSYFREDTAPDIGFKEVLT---------TEKLRVTKIKKSSLMTTTTPKY-----------SRNAAK-------------DKCVLPLKKFN----SNNILSNKLLKEFIGYMNKNSVRYVHEFMRDKKACSEQS-VGFIVSSPKTSTVKCCSSPWGG----------NCYIEFAECDGSCIPQDWISDNWPDCLDGSDEPELESLSGRSLSEELQCVSCGXNXXXAVSLCSDKNYIHLTNCVKELLGDGNCSLCISDYFE 341 + +F+A P CW+PGSNPF GQP+ R D V++ WS+IF+ +C+ VDF+IKS+PR P+ YKLSDFT K Q SAT+ V G D+VFQIIARE+K + GIEYKYS MVT+Y + + D L T ++R T + M TTPK SR DKC+ L N +N+ +++++ FI ++N+ S V +F+ +K C Q GF V+ P V CCSSPW C ++ CDG CIPQ W++D WPDCLDGSDE E R+L ++L C+ C +++LCS+ CV++++G+G+C+ CI D+ Sbjct: 620 VTIFIALIPASVLGNLCWKPGSNPFYGQPRATRTGLDYVKLEWSDIFDGGSDCQLVDFMIKSHPRFKPAQYKLSDFTLKSQRSATVKVERGVDYVFQIIARENKGAQLGIEYKYSPMVTNYAMKLGSSDRVVNAQLASSPRQSPPITHEIRTTPPTSPAPM--TTPKTFLVPITRALPSSRERTNDQGLTGPTLFSPLDKCIPALSASNGFGHGSNMKTDRIIVNFIRFLNRQSQVEVGQFLATRKGCDAQHKKGFEVTCPGRQAV-CCSSPWTSCSSDRLGESQACVSDYFTCDGHCIPQKWVNDGWPDCLDGSDETEGVDRMARTLPQDLGCLQCSSVVLASMALCSNSGSGVTRQCVEDMMGEGDCNSCIGDFLR 994 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006453 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000006453 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000006453 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000006453 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000006453 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000006453 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000006453 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s3535:2974..4429- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006453-689219 ID=EMLSAG00000006453-689219|Name=EMLSAG00000006453|organism=Lepeophtheirus salmonis|type=gene|length=1456bp|location=Sequence derived from alignment at LSalAtl2s3535:2974..4429- (Lepeophtheirus salmonis)back to top Add to Basket
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