EMLSAG00000007670, EMLSAG00000007670-690436 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000007670 vs. C. finmarchicus
Match: gi|592942815|gb|GAXK01015738.1| (TSA: Calanus finmarchicus comp504774_c1_seq33 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 2.353e+0 Identity = 47/184 (25.54%), Postives = 85/184 (46.20%), Query Frame = 0 Query: 142 ELTRLKAMIADLAKYIEALHG---KGKILFDAYLGLKKHLDELKQTIQSLQT-------EDQQKKTTIANVREEIETWKGKARELQAELD----ELRTKYHDLQAEHKEGGEKLKECFSDKSRCLSENDRLKKKIHDEEAENSEIKRRLLEAAKYKEQLKEVKFAIAKFEYKVEKLQENLEKET 311 E++RLK +D K IE L K + + + L K L++LK+T + ++T E Q+ + NV+ ++ + +EL ++D EL H++Q H E K + L+KK+ DEE N ++K ++ Y +++ ++K A E K++ + LE E Sbjct: 474 EISRLKIENSDKQKEIEELQSCRIKDENIHEEIGTLTKELEDLKETHEEVKTWGEFKEREVDQRTRHLVNVKNKMRDGERTIQELNKKMDGYVKELSN--HEIQKRHLENEMKANKLA------------LEKKVRDEELTNEDLKNKV---NGYTKEISDLKSEKANLENKMKASKIALENEV 974
BLAST of EMLSAG00000007670 vs. C. finmarchicus
Match: gi|592942846|gb|GAXK01015707.1| (TSA: Calanus finmarchicus comp504774_c1_seq2 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 2.354e+0 Identity = 47/184 (25.54%), Postives = 85/184 (46.20%), Query Frame = 0 Query: 142 ELTRLKAMIADLAKYIEALHG---KGKILFDAYLGLKKHLDELKQTIQSLQT-------EDQQKKTTIANVREEIETWKGKARELQAELD----ELRTKYHDLQAEHKEGGEKLKECFSDKSRCLSENDRLKKKIHDEEAENSEIKRRLLEAAKYKEQLKEVKFAIAKFEYKVEKLQENLEKET 311 E++RLK +D K IE L K + + + L K L++LK+T + ++T E Q+ + NV+ ++ + +EL ++D EL H++Q H E K + L+KK+ DEE N ++K ++ Y +++ ++K A E K++ + LE E Sbjct: 527 EISRLKIENSDKQKEIEELQSCRIKDENIHEEIGTLTKELEDLKETHEEVKTWGEFKEREVDQRTRHLVNVKNKMRDGERTIQELNKKMDGYVKELSN--HEIQKRHLENEMKANKLA------------LEKKVRDEELTNEDLKNKV---NGYTKEISDLKSEKANLENKMKASKIALENEV 1027
BLAST of EMLSAG00000007670 vs. C. finmarchicus
Match: gi|592942827|gb|GAXK01015726.1| (TSA: Calanus finmarchicus comp504774_c1_seq21 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 2.484e+0 Identity = 47/184 (25.54%), Postives = 85/184 (46.20%), Query Frame = 0 Query: 142 ELTRLKAMIADLAKYIEALHG---KGKILFDAYLGLKKHLDELKQTIQSLQT-------EDQQKKTTIANVREEIETWKGKARELQAELD----ELRTKYHDLQAEHKEGGEKLKECFSDKSRCLSENDRLKKKIHDEEAENSEIKRRLLEAAKYKEQLKEVKFAIAKFEYKVEKLQENLEKET 311 E++RLK +D K IE L K + + + L K L++LK+T + ++T E Q+ + NV+ ++ + +EL ++D EL H++Q H E K + L+KK+ DEE N ++K ++ Y +++ ++K A E K++ + LE E Sbjct: 474 EISRLKIENSDKQKEIEELQSCRIKDENIHEEIGTLTKELEDLKETHEEVKTWGEFKEREVDQRTRHLVNVKNKMRDGERTIQELNKKMDGYVKELSN--HEIQKRHLENEMKANKLA------------LEKKVRDEELTNEDLKNKV---NGYTKEISDLKSEKANLENKMKASKIALENEV 974
BLAST of EMLSAG00000007670 vs. C. finmarchicus
Match: gi|592942834|gb|GAXK01015719.1| (TSA: Calanus finmarchicus comp504774_c1_seq14 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 2.500e+0 Identity = 47/184 (25.54%), Postives = 85/184 (46.20%), Query Frame = 0 Query: 142 ELTRLKAMIADLAKYIEALHG---KGKILFDAYLGLKKHLDELKQTIQSLQT-------EDQQKKTTIANVREEIETWKGKARELQAELD----ELRTKYHDLQAEHKEGGEKLKECFSDKSRCLSENDRLKKKIHDEEAENSEIKRRLLEAAKYKEQLKEVKFAIAKFEYKVEKLQENLEKET 311 E++RLK +D K IE L K + + + L K L++LK+T + ++T E Q+ + NV+ ++ + +EL ++D EL H++Q H E K + L+KK+ DEE N ++K ++ Y +++ ++K A E K++ + LE E Sbjct: 474 EISRLKIENSDKQKEIEELQSCRIKDENIHEEIGTLTKELEDLKETHEEVKTWGEFKEREVDQRTRHLVNVKNKMRDGERTIQELNKKMDGYVKELSN--HEIQKRHLENEMKANKLA------------LEKKVRDEELTNEDLKNKV---NGYTKEISDLKSEKANLENKMKASKIALENEV 974
BLAST of EMLSAG00000007670 vs. C. finmarchicus
Match: gi|592942843|gb|GAXK01015710.1| (TSA: Calanus finmarchicus comp504774_c1_seq5 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 2.553e+0 Identity = 47/184 (25.54%), Postives = 85/184 (46.20%), Query Frame = 0 Query: 142 ELTRLKAMIADLAKYIEALHG---KGKILFDAYLGLKKHLDELKQTIQSLQT-------EDQQKKTTIANVREEIETWKGKARELQAELD----ELRTKYHDLQAEHKEGGEKLKECFSDKSRCLSENDRLKKKIHDEEAENSEIKRRLLEAAKYKEQLKEVKFAIAKFEYKVEKLQENLEKET 311 E++RLK +D K IE L K + + + L K L++LK+T + ++T E Q+ + NV+ ++ + +EL ++D EL H++Q H E K + L+KK+ DEE N ++K ++ Y +++ ++K A E K++ + LE E Sbjct: 474 EISRLKIENSDKQKEIEELQSCRIKDENIHEEIGTLTKELEDLKETHEEVKTWGEFKEREVDQRTRHLVNVKNKMRDGERTIQELNKKMDGYVKELSN--HEIQKRHLENEMKANKLA------------LEKKVRDEELTNEDLKNKV---NGYTKEISDLKSEKANLENKMKASKIALENEV 974
BLAST of EMLSAG00000007670 vs. C. finmarchicus
Match: gi|592942812|gb|GAXK01015741.1| (TSA: Calanus finmarchicus comp504774_c1_seq36 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 4.810e+0 Identity = 47/184 (25.54%), Postives = 85/184 (46.20%), Query Frame = 0 Query: 142 ELTRLKAMIADLAKYIEALHG---KGKILFDAYLGLKKHLDELKQTIQSLQT-------EDQQKKTTIANVREEIETWKGKARELQAELD----ELRTKYHDLQAEHKEGGEKLKECFSDKSRCLSENDRLKKKIHDEEAENSEIKRRLLEAAKYKEQLKEVKFAIAKFEYKVEKLQENLEKET 311 E++RLK +D K IE L K + + + L K L++LK+T + ++T E Q+ + NV+ ++ + +EL ++D EL H++Q H E K + L+KK+ DEE N ++K ++ Y +++ ++K A E K++ + LE E Sbjct: 527 EISRLKIENSDKQKEIEELQSCRIKDENIHEEIGTLTKELEDLKETHEEVKTWGEFKEREVDQRTRHLVNVKNKMRDGERTIQELNKKMDGYVKELSN--HEIQKRHLENEMKANKLA------------LEKKVRDEELTNEDLKNKV---NGYTKEISDLKSEKANLENKMKASKIALENEV 1027
BLAST of EMLSAG00000007670 vs. C. finmarchicus
Match: gi|592942809|gb|GAXK01015744.1| (TSA: Calanus finmarchicus comp504774_c1_seq39 transcribed RNA sequence) HSP 1 Score: 31.9574 bits (71), Expect = 5.844e+0 Identity = 47/184 (25.54%), Postives = 85/184 (46.20%), Query Frame = 0 Query: 142 ELTRLKAMIADLAKYIEALHG---KGKILFDAYLGLKKHLDELKQTIQSLQT-------EDQQKKTTIANVREEIETWKGKARELQAELD----ELRTKYHDLQAEHKEGGEKLKECFSDKSRCLSENDRLKKKIHDEEAENSEIKRRLLEAAKYKEQLKEVKFAIAKFEYKVEKLQENLEKET 311 E++RLK +D K IE L K + + + L K L++LK+T + ++T E Q+ + NV+ ++ + +EL ++D EL H++Q H E K + L+KK+ DEE N ++K ++ Y +++ ++K A E K++ + LE E Sbjct: 474 EISRLKIENSDKQKEIEELQSCRIKDENIHEEIGTLTKELEDLKETHEEVKTWGEFKEREVDQRTRHLVNVKNKMRDGERTIQELNKKMDGYVKELSN--HEIQKRHLENEMKANKLA------------LEKKVRDEELTNEDLKNKV---NGYTKEISDLKSEKANLENKMKASKIALENEV 974
BLAST of EMLSAG00000007670 vs. L. salmonis peptides
Match: EMLSAP00000007670 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4476:1751:4717:-1 gene:EMLSAG00000007670 transcript:EMLSAT00000007670 description:"snap_masked-LSalAtl2s4476-processed-gene-0.1") HSP 1 Score: 1138.64 bits (2944), Expect = 0.000e+0 Identity = 549/549 (100.00%), Postives = 549/549 (100.00%), Query Frame = 0 Query: 1 MRNTGVWTLSIYFLFNILNGIDAGDYGKSSAAPPNPKPAPPNPKPAPPNTKPAPSKEVEIPPYGDFKDDIDRAGDTSKACRYDEPFWSDCDAFELKRYRVLHLIHGGRQCEEVKNITKHCTPGEFPPGTTWLISEHRKCIAELTRLKAMIADLAKYIEALHGKGKILFDAYLGLKKHLDELKQTIQSLQTEDQQKKTTIANVREEIETWKGKARELQAELDELRTKYHDLQAEHKEGGEKLKECFSDKSRCLSENDRLKKKIHDEEAENSEIKRRLLEAAKYKEQLKEVKFAIAKFEYKVEKLQENLEKETNIKKEAKCLITYYGXTNESCWYQTKGQSSEYEYADSMGHHLVEAHWKYFTIDVANQYDCDRAAQLHYEFLLNRCSPKHYLPVMSVYRPNGQLKELPTHIYPKPNIPQPGHPYRCWITFLGPHGHCERHMDRYDLYNVDDGQDERIATNKLNRHGGEPPPLNTGGNKSSSSSSTSKSSASSGSSSSSAMSSSNKDSHTSESEKSSSSSLKSGSSSSLDKGSSSLSGSISSSSSGASSNE 549 MRNTGVWTLSIYFLFNILNGIDAGDYGKSSAAPPNPKPAPPNPKPAPPNTKPAPSKEVEIPPYGDFKDDIDRAGDTSKACRYDEPFWSDCDAFELKRYRVLHLIHGGRQCEEVKNITKHCTPGEFPPGTTWLISEHRKCIAELTRLKAMIADLAKYIEALHGKGKILFDAYLGLKKHLDELKQTIQSLQTEDQQKKTTIANVREEIETWKGKARELQAELDELRTKYHDLQAEHKEGGEKLKECFSDKSRCLSENDRLKKKIHDEEAENSEIKRRLLEAAKYKEQLKEVKFAIAKFEYKVEKLQENLEKETNIKKEAKCLITYYGXTNESCWYQTKGQSSEYEYADSMGHHLVEAHWKYFTIDVANQYDCDRAAQLHYEFLLNRCSPKHYLPVMSVYRPNGQLKELPTHIYPKPNIPQPGHPYRCWITFLGPHGHCERHMDRYDLYNVDDGQDERIATNKLNRHGGEPPPLNTGGNKSSSSSSTSKSSASSGSSSSSAMSSSNKDSHTSESEKSSSSSLKSGSSSSLDKGSSSLSGSISSSSSGASSNE Sbjct: 1 MRNTGVWTLSIYFLFNILNGIDAGDYGKSSAAPPNPKPAPPNPKPAPPNTKPAPSKEVEIPPYGDFKDDIDRAGDTSKACRYDEPFWSDCDAFELKRYRVLHLIHGGRQCEEVKNITKHCTPGEFPPGTTWLISEHRKCIAELTRLKAMIADLAKYIEALHGKGKILFDAYLGLKKHLDELKQTIQSLQTEDQQKKTTIANVREEIETWKGKARELQAELDELRTKYHDLQAEHKEGGEKLKECFSDKSRCLSENDRLKKKIHDEEAENSEIKRRLLEAAKYKEQLKEVKFAIAKFEYKVEKLQENLEKETNIKKEAKCLITYYGXTNESCWYQTKGQSSEYEYADSMGHHLVEAHWKYFTIDVANQYDCDRAAQLHYEFLLNRCSPKHYLPVMSVYRPNGQLKELPTHIYPKPNIPQPGHPYRCWITFLGPHGHCERHMDRYDLYNVDDGQDERIATNKLNRHGGEPPPLNTGGNKSSSSSSTSKSSASSGSSSSSAMSSSNKDSHTSESEKSSSSSLKSGSSSSLDKGSSSLSGSISSSSSGASSNE 549
BLAST of EMLSAG00000007670 vs. L. salmonis peptides
Match: EMLSAP00000000183 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1028:71411:72669:-1 gene:EMLSAG00000000183 transcript:EMLSAT00000000183 description:"maker-LSalAtl2s1028-snap-gene-0.17") HSP 1 Score: 189.504 bits (480), Expect = 2.177e-54 Identity = 89/231 (38.53%), Postives = 150/231 (64.94%), Query Frame = 0 Query: 79 ACRYDEPFWSDCDAFELKRYRVLHLIHGGRQCEEVKNITKHCTPGEFPPGTTWLISEHRKCIAELTRLKAMIADLAKYIEALHGKGKILFDAYLGLKKHLDELKQTIQSLQTEDQQKKTTIANVREEIETWKGKARELQAELDELRTKYHDLQAEHKEGGEKLKECFSDKSRCLSENDRLKKKIHDEEAENSEIKRRLLEAAKYKEQLKEVKFAIAKFEYKVEKLQENLEK 309 C+Y E WSDCD FE ++RV LI+GG +CE KN TK C + PGT WL++EH+KCI+EL LK +I DL ++++ +H +G +F+A+ LKKHL++++Q I L + + I +++E++ WKGKAR+ Q ELDEL+TKY +L+ +H + + C S++++C +E + KI + EN ++K +L+ A KYK+ ++ + + E +V++L ++++K Sbjct: 46 GCKYQETPWSDCDPFEFVQWRVRPLINGGAECEPKKNDTKQCGLDQLAPGTKWLLAEHKKCISELEHLKDIIGDLHRWVDLIHERGXAMFNAFNELKKHLEDIQQQIIGLHRVNHDNEVIINRLKKELDEWKGKARKFQVELDELKTKYMELERQHNKMKREFSSCSSERAQCNAEQTTYESKISNIVQENRQLKSQLINAEKYKDLVEAARKRVKSLEIQVDRLLKDIKK 276 The following BLAST results are available for this feature:
BLAST of EMLSAG00000007670 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000007670 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 17
Pagesback to top
BLAST of EMLSAG00000007670 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000007670 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000007670 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000007670 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000007670 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s4476:1751..4717- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000007670-690436 ID=EMLSAG00000007670-690436|Name=EMLSAG00000007670|organism=Lepeophtheirus salmonis|type=gene|length=2967bp|location=Sequence derived from alignment at LSalAtl2s4476:1751..4717- (Lepeophtheirus salmonis)back to top Add to Basket
|