EMLSAG00000009194, EMLSAG00000009194-691960 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000009194 vs. L. salmonis peptides
Match: EMLSAP00000009194 (pep:novel supercontig:LSalAtl2s:LSalAtl2s583:258140:262233:-1 gene:EMLSAG00000009194 transcript:EMLSAT00000009194 description:"maker-LSalAtl2s583-snap-gene-1.41") HSP 1 Score: 318.546 bits (815), Expect = 7.784e-112 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
Query: 1 NKGSSRSSPSFGSNVQSATNALYRSISNNNAGASISSSGVNINNQNEFVNKQNSPYYRSTRPVSNSEINQNQNSANNAGDYFSPKHNNKVISVSSGISKKNYSPMSSNGVNLNNQNHLVSQSNSPSYRSIGPFSNNEISQKQNSQNSVNNADAYSTPSFGSNVQSATNGL 170
NKGSSRSSPSFGSNVQSATNALYRSISNNNAGASISSSGVNINNQNEFVNKQNSPYYRSTRPVSNSEINQNQNSANNAGDYFSPKHNNKVISVSSGISKKNYSPMSSNGVNLNNQNHLVSQSNSPSYRSIGPFSNNEISQKQNSQNSVNNADAYSTPSFGSNVQSATNGL
Sbjct: 1 NKGSSRSSPSFGSNVQSATNALYRSISNNNAGASISSSGVNINNQNEFVNKQNSPYYRSTRPVSNSEINQNQNSANNAGDYFSPKHNNKVISVSSGISKKNYSPMSSNGVNLNNQNHLVSQSNSPSYRSIGPFSNNEISQKQNSQNSVNNADAYSTPSFGSNVQSATNGL 170
BLAST of EMLSAG00000009194 vs. L. salmonis peptides
Match: EMLSAP00000010314 (pep:novel supercontig:LSalAtl2s:LSalAtl2s6833:1:1974:1 gene:EMLSAG00000010314 transcript:EMLSAT00000010314 description:"augustus_masked-LSalAtl2s6833-processed-gene-0.1") HSP 1 Score: 162.925 bits (411), Expect = 1.525e-48 Identity = 108/189 (57.14%), Postives = 127/189 (67.20%), Query Frame = 0
Query: 7 SSPSFGSNVQSATNALYRSISN-------------NNAGASISSS--------GVNINNQNEFVNKQNSPYYRSTRPVSNSEINQNQNSANNAGDYFSPKHNNKVISVSSGISKK---NY--SPMSSNGVNLNNQNHLVSQSNSPSYRSIGPFSNNEISQKQNSQNSVNNADAYSTPSFGSNVQSATNG 169
SSPSFGSNVQSATN LYRS +N NN IS S G+N+NNQN+ +++ NSP YRS P+ NSEI+Q QNS NNAG Y SP + V S ++G+ + NY SPMSS GVNLNN+N LVSQSNSPSYRS GP +N E+SQ QNS+NNA YS+PSFGSNVQSATNG
Sbjct: 192 SSPSFGSNVQSATNGLYRSHTNYPGTPLSSTGINVNNQNDLISQSNSPSYRSIGINVNNQNDLISQSNSPSYRSIGPIDNSEISQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNYPESPMSSTGVNLNNKNSLVSQSNSPSYRSHGPVANLEVSQN---QNSLNNAGGYSSPSFGSNVQSATNG 377 HSP 2 Score: 155.992 bits (393), Expect = 6.811e-46 Identity = 101/190 (53.16%), Postives = 125/190 (65.79%), Query Frame = 0
Query: 7 SSPSFGSNVQSATNALYRSISNNNAGASISSSGVNINNQNEFVNKQNSPYYRSTRPVSNSEINQNQNSANNAGDYFSPKHNNKVISVSSGI--SKKNY--SPMSSN----------------------GVNLNNQNHLVSQSNSPSYRSIGPFSNNEISQKQNSQNSVNNADAYSTPSFGSNVQSATNGL 170
SSPSFG NVQS TN+L+R +NN +SS+GVN+N QN +++ NS YRS P++NSEI+Q QNS NNA + SP + V S ++G+ S NY +P+SS G+N+NNQN L+SQSNSPSYRSIGP N+EISQK QNSVNNA YS+PSFGSNVQSATNGL
Sbjct: 117 SSPSFGDNVQSGTNSLFRRQTNNFPENPLSSTGVNLNIQNSLLSQSNSGLYRSMSPLTNSEISQKQNSVNNAAGFSSPSFGSNVQSATNGLYRSHTNYPGTPLSSTGINVNNQNDLISQSNSPSYRSIGINVNNQNDLISQSNSPSYRSIGPIDNSEISQK---QNSVNNAGGYSSPSFGSNVQSATNGL 303 HSP 3 Score: 103.219 bits (256), Expect = 1.642e-26 Identity = 84/179 (46.93%), Postives = 107/179 (59.78%), Query Frame = 0
Query: 16 QSATNALYRSISNNNAGASISSSGVNINNQNEFV---------------NKQNSPYYR----STRPVSNSEINQNQNSANNAGDYFSPKHNNKVISVSSGISKKNY-----SPMSSNGVNLNNQNHLVSQSNSPSYRSIGPFSNNEISQKQNSQNSVNNADAYSTPSFGSNVQSATNGL 170
Q +TN +ISN N S +G N+NNQNE + NK NS + S P++NSEI+Q QNS NNA SP + V S ++ + ++ +P+SS GVNLN QN L+SQSNS YRS+ P +N+EISQK QNSVNNA +S+PSFGSNVQSATNGL
Sbjct: 32 QQSTNGQNENISNGNDINSNMPNGDNLNNQNESMDQLNSNGQSENTSNGNKGNSNFPNGGNPSIGPINNSEISQKQNSLNNAKGNSSPSFGDNVQSGTNSLFRRQTNNFPENPLSSTGVNLNIQNSLLSQSNSGLYRSMSPLTNSEISQK---QNSVNNAAGFSSPSFGSNVQSATNGL 207
BLAST of EMLSAG00000009194 vs. L. salmonis peptides
Match: EMLSAP00000010553 (pep:novel supercontig:LSalAtl2s:LSalAtl2s7003:1391:3379:1 gene:EMLSAG00000010553 transcript:EMLSAT00000010553 description:"maker-LSalAtl2s7003-snap-gene-0.2") HSP 1 Score: 128.257 bits (321), Expect = 5.244e-37 Identity = 79/131 (60.31%), Postives = 97/131 (74.05%), Query Frame = 0
Query: 45 QNEFVNKQNSPYYRSTRPVSNSEINQNQNSANNAGDYFSPKHNNKVISVSSGI--SKKNYSPM---SSNGVNLNNQNHLVSQSNSPSYRSIGPFSNNEISQKQNSQNSVNNADAYSTPSFGSNVQSATNGL 170
++ + NSPY RS RP+ NSEI+Q QNS N+AG Y SP + V S ++G+ S+ NYSP+ +S G+N+NN+N LVSQSNSPSYRSIGP N+EI QK QNSVNNA YS+PSFGSNVQSATNGL
Sbjct: 56 KHNLLYPLNSPY-RSIRPIDNSEISQKQNSVNSAGGYSSPSFGSNVQSAANGLYRSRTNYSPVNPSTSTGINVNNRNDLVSQSNSPSYRSIGPTDNSEILQK---QNSVNNAGGYSSPSFGSNVQSATNGL 182 HSP 2 Score: 86.6557 bits (213), Expect = 2.484e-21 Identity = 50/93 (53.76%), Postives = 65/93 (69.89%), Query Frame = 0
Query: 7 SSPSFGSNVQSATNALYRSISNNNAGASISSSGVNINNQNEFVNKQNSPYYRSTRPVSNSEINQNQNSANNAGDYFSPKHNNKVISVSSGISK 99
SSPSFGSNVQSA N LYRS +N + +S+G+N+NN+N+ V++ NSP YRS P NSEI Q QNS NNAG Y SP + V S ++G+ +
Sbjct: 92 SSPSFGSNVQSAANGLYRSRTNYSPVNPSTSTGINVNNRNDLVSQSNSPSYRSIGPTDNSEILQKQNSVNNAGGYSSPSFGSNVQSATNGLYR 184
BLAST of EMLSAG00000009194 vs. L. salmonis peptides
Match: EMLSAP00000004268 (pep:novel supercontig:LSalAtl2s:LSalAtl2s223:77:757:-1 gene:EMLSAG00000004268 transcript:EMLSAT00000004268 description:"maker-LSalAtl2s223-snap-gene-0.10") HSP 1 Score: 66.6254 bits (161), Expect = 1.391e-14 Identity = 51/117 (43.59%), Postives = 66/117 (56.41%), Query Frame = 0
Query: 7 SSPSFGSNVQSATNALYRSISNNNAGASISSSGVNINNQNEFVNKQNSPYYRSTRPVSNSEINQNQNSANNAGDYFSPKHNNKVISVSSGISKK---NY--SPMSSNGVNLNNQNHL 118
SSPSFGSN Q+ATN LYRSI+NNNAGASI+S+GVN NS NNA + SP + V S ++G+ + +Y +P+SS+GVNLN+QN L
Sbjct: 41 SSPSFGSNAQAATNGLYRSITNNNAGASIASTGVN-------------------------------NSVNNAEGHSSPSFGSNVQSATNGLYRSQNNDYLRNPISSSGVNLNSQNSL 126 HSP 2 Score: 51.6026 bits (122), Expect = 2.747e-9 Identity = 44/112 (39.29%), Postives = 54/112 (48.21%), Query Frame = 0
Query: 62 PVSNSEINQNQNSANNAGDYFSPKHNNKVISVSSGISKKNYSPMSSNGVNLNNQNHLVSQSNSPSYRSIGPFSNNEISQKQNSQ---NSVNNADAYSTPSFGSNVQSATNGL 170
P SEINQN NS NNAG + SP + + ++G+ YRSI +NN S NSVNNA+ +S+PSFGSNVQSATNGL
Sbjct: 21 PALTSEINQNINSENNAGRFSSPSFGSNAQAATNGL-----------------------------YRSI---TNNNAGASIASTGVNNSVNNAEGHSSPSFGSNVQSATNGL 100 The following BLAST results are available for this feature:
BLAST of EMLSAG00000009194 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000009194 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000009194 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 4
BLAST of EMLSAG00000009194 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000009194 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000009194 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000009194 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s583:258140..262233- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000009194-691960 ID=EMLSAG00000009194-691960|Name=EMLSAG00000009194|organism=Lepeophtheirus salmonis|type=gene|length=4094bp|location=Sequence derived from alignment at LSalAtl2s583:258140..262233- (Lepeophtheirus salmonis)back to top Add to Basket
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