EMLSAG00000009344, EMLSAG00000009344-692110 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000009344 vs. C. finmarchicus
Match: gi|592812936|gb|GAXK01141632.1| (TSA: Calanus finmarchicus comp190308_c4_seq1 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 1.484e+0 Identity = 26/68 (38.24%), Postives = 36/68 (52.94%), Query Frame = 0 Query: 67 DLELDALHLSRRDNPYLQILNSRECL--------LSESP----PQSFTSPTRSCDPLIISPEIHSHLV 122 + E++ LHLSRRDNPY L+S E L LS +P SP + P I+ E+H+HL+ Sbjct: 4124 EAEMEDLHLSRRDNPY---LSSCEALDDYGDDTSLSPTPGSPRQNESISPAETFSPESIT-ELHAHLI 4315
BLAST of EMLSAG00000009344 vs. L. salmonis peptides
Match: EMLSAP00000009344 (pep:novel supercontig:LSalAtl2s:LSalAtl2s598:260563:262346:-1 gene:EMLSAG00000009344 transcript:EMLSAT00000009344 description:"maker-LSalAtl2s598-augustus-gene-2.23") HSP 1 Score: 726.087 bits (1873), Expect = 0.000e+0 Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0 Query: 1 MDHRRKCTNRPLKIITNLFSRGKHKNRSNNGSNNNKNLLDHENNPTTPGDNGLDCISAGSTCRSTGDLELDALHLSRRDNPYLQILNSRECLLSESPPQSFTSPTRSCDPLIISPEIHSHLVRSPPPISWPISPRSGTFSPIEFSSVDGLDEYRRSHSEEHILGSRSVTXSMMLSPVRGXXPDIVCSSPNYYGGERSGGRHSRFANWRNMDKSTENDLLSPKNTPNDDVGATMNFSVDEQDGIHAYRHKFLSGSRSLISNGGNQFYRSNRASSAVRRDSYWQNQWRNKSDIKSMENLINDGGYYNDHDRKSSFSQSTRGDPPASSSSPRCNRSFYLRKSITLRPKSGDGPIYMDIESQS 359 MDHRRKCTNRPLKIITNLFSRGKHKNRSNNGSNNNKNLLDHENNPTTPGDNGLDCISAGSTCRSTGDLELDALHLSRRDNPYLQILNSRECLLSESPPQSFTSPTRSCDPLIISPEIHSHLVRSPPPISWPISPRSGTFSPIEFSSVDGLDEYRRSHSEEHILGSRSVTXSMMLSPVRGXXPDIVCSSPNYYGGERSGGRHSRFANWRNMDKSTENDLLSPKNTPNDDVGATMNFSVDEQDGIHAYRHKFLSGSRSLISNGGNQFYRSNRASSAVRRDSYWQNQWRNKSDIKSMENLINDGGYYNDHDRKSSFSQSTRGDPPASSSSPRCNRSFYLRKSITLRPKSGDGPIYMDIESQS Sbjct: 1 MDHRRKCTNRPLKIITNLFSRGKHKNRSNNGSNNNKNLLDHENNPTTPGDNGLDCISAGSTCRSTGDLELDALHLSRRDNPYLQILNSRECLLSESPPQSFTSPTRSCDPLIISPEIHSHLVRSPPPISWPISPRSGTFSPIEFSSVDGLDEYRRSHSEEHILGSRSVTXSMMLSPVRGXXPDIVCSSPNYYGGERSGGRHSRFANWRNMDKSTENDLLSPKNTPNDDVGATMNFSVDEQDGIHAYRHKFLSGSRSLISNGGNQFYRSNRASSAVRRDSYWQNQWRNKSDIKSMENLINDGGYYNDHDRKSSFSQSTRGDPPASSSSPRCNRSFYLRKSITLRPKSGDGPIYMDIESQS 359
BLAST of EMLSAG00000009344 vs. Select Arthropod Genomes
Match: EEB17029.1 (conserved hypothetical protein [Pediculus humanus corporis]) HSP 1 Score: 67.781 bits (164), Expect = 2.828e-12 Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 0 Query: 67 DLELDALHLSRRDNPYLQILNSRECLL-----SESPPQSFTSPTRS----CDPLIISPEIHSHLVRSPPPISWPISPRSGTF 139 D +++AL LSRRDNP+LQ+L S+E L+ SES + S S DP + PEIH H++RSPPP +WP SP F Sbjct: 29 DQDMEALRLSRRDNPFLQVLTSKESLVESLFESESDDTNLMSQEISNDLEVDPFSL-PEIHEHMIRSPPPTTWPRSPNYKMF 109
BLAST of EMLSAG00000009344 vs. Select Arthropod Genomes
Match: XP_392709.3 (PREDICTED: uncharacterized protein LOC409185 [Apis mellifera]) HSP 1 Score: 62.3882 bits (150), Expect = 3.066e-10 Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 67 DLELDALHLSRRDNPYLQILNSRECLL-----SESPPQSFTSPTR-SCDPLIISPEIHSHLVRSPPPISWP 131 D +++AL LSR+DNP+LQ+L SRE L+ SES S DPL ++ ++H HLVRSPPP SWP Sbjct: 109 DQDMEALRLSRQDNPFLQVLASRESLVESLEESESDDAILMSQELGDTDPLTLA-QVHEHLVRSPPPASWP 178
BLAST of EMLSAG00000009344 vs. Select Arthropod Genomes
Match: XP_016772326.1 (PREDICTED: uncharacterized protein LOC409185 [Apis mellifera]) HSP 1 Score: 62.3882 bits (150), Expect = 3.066e-10 Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 67 DLELDALHLSRRDNPYLQILNSRECLL-----SESPPQSFTSPTR-SCDPLIISPEIHSHLVRSPPPISWP 131 D +++AL LSR+DNP+LQ+L SRE L+ SES S DPL ++ ++H HLVRSPPP SWP Sbjct: 109 DQDMEALRLSRQDNPFLQVLASRESLVESLEESESDDAILMSQELGDTDPLTLA-QVHEHLVRSPPPASWP 178
BLAST of EMLSAG00000009344 vs. Select Arthropod Genomes
Match: XP_006557656.1 (PREDICTED: uncharacterized protein LOC409185 [Apis mellifera]) HSP 1 Score: 62.3882 bits (150), Expect = 3.066e-10 Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 67 DLELDALHLSRRDNPYLQILNSRECLL-----SESPPQSFTSPTR-SCDPLIISPEIHSHLVRSPPPISWP 131 D +++AL LSR+DNP+LQ+L SRE L+ SES S DPL ++ ++H HLVRSPPP SWP Sbjct: 109 DQDMEALRLSRQDNPFLQVLASRESLVESLEESESDDAILMSQELGDTDPLTLA-QVHEHLVRSPPPASWP 178
BLAST of EMLSAG00000009344 vs. Select Arthropod Genomes
Match: XP_006557654.1 (PREDICTED: uncharacterized protein LOC409185 [Apis mellifera]) HSP 1 Score: 62.3882 bits (150), Expect = 3.066e-10 Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 67 DLELDALHLSRRDNPYLQILNSRECLL-----SESPPQSFTSPTR-SCDPLIISPEIHSHLVRSPPPISWP 131 D +++AL LSR+DNP+LQ+L SRE L+ SES S DPL ++ ++H HLVRSPPP SWP Sbjct: 109 DQDMEALRLSRQDNPFLQVLASRESLVESLEESESDDAILMSQELGDTDPLTLA-QVHEHLVRSPPPASWP 178
BLAST of EMLSAG00000009344 vs. Select Arthropod Genomes
Match: gb|EEZ98319.2| (hypothetical protein TcasGA2_TC000773 [Tribolium castaneum]) HSP 1 Score: 56.9954 bits (136), Expect = 1.348e-8 Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 0 Query: 67 DLELDALHLSRRDNPYLQ-ILNSRECLL----SESPPQSFTSPTRS----CDPLIISPEIHSHLVRSPPPISWPISPRSGTF 139 D +++AL SR+DNP++Q ++ SRE L+ ES + S S DPL + PE+H H++RSPPP +WP SP F Sbjct: 59 DQDMEALRASRQDNPFIQQVIASRESLIDSLEEESDHANLMSRELSIDLDVDPLTL-PEMHEHMIRSPPPTTWPRSPNFKMF 139
BLAST of EMLSAG00000009344 vs. nr
Match: gi|1101368216|ref|XP_018915414.1| (PREDICTED: uncharacterized protein LOC109042899 [Bemisia tabaci] >gi|1101368218|ref|XP_018915415.1| PREDICTED: uncharacterized protein LOC109042899 [Bemisia tabaci]) HSP 1 Score: 68.9366 bits (167), Expect = 4.006e-10 Identity = 49/147 (33.33%), Postives = 72/147 (48.98%), Query Frame = 0 Query: 11 PLKIITNLFSRGKHKNRSNNGSNNNKNLLDHENNPTTPGDNGLDCISA------------GSTCRSTG-----DLELDALHLSRRDNPYLQILNSRECL------LSESPPQSFTSPTRSCDPLIISPEIHSHLVRSPPPISWPISP 134 PL++ TN F R K + + ++ D N+ T ++G +S+ S C ST + +++AL +SR+DNP+LQ+L SRE L L DPL + P+IH H+VRSPPP+SWP SP Sbjct: 7 PLRLFTNFFKRKKSDLKCHIKVSSE----DCVNSDDTTANHGACLVSSLSVRDIALNRCPASPCTSTMRCRDINQDMEALRISRQDNPFLQVLASRESLADSLEELESDDVNLMAQQEADVDPLTL-PDIHQHMVRSPPPVSWPRSP 148
BLAST of EMLSAG00000009344 vs. nr
Match: gi|242018610|ref|XP_002429767.1| (conserved hypothetical protein [Pediculus humanus corporis] >gi|212514779|gb|EEB17029.1| conserved hypothetical protein [Pediculus humanus corporis]) HSP 1 Score: 67.781 bits (164), Expect = 1.384e-9 Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 0 Query: 67 DLELDALHLSRRDNPYLQILNSRECLL-----SESPPQSFTSPTRS----CDPLIISPEIHSHLVRSPPPISWPISPRSGTF 139 D +++AL LSRRDNP+LQ+L S+E L+ SES + S S DP + PEIH H++RSPPP +WP SP F Sbjct: 29 DQDMEALRLSRRDNPFLQVLTSKESLVESLFESESDDTNLMSQEISNDLEVDPFSL-PEIHEHMIRSPPPTTWPRSPNYKMF 109
BLAST of EMLSAG00000009344 vs. nr
Match: gi|939661451|ref|XP_014278527.1| (PREDICTED: uncharacterized protein LOC106682282 [Halyomorpha halys]) HSP 1 Score: 65.855 bits (159), Expect = 1.174e-8 Identity = 53/160 (33.12%), Postives = 80/160 (50.00%), Query Frame = 0 Query: 7 CTNRPLKIITNLFSRGKHKNRSNNGSNNNKNLLDHENNPTTPGDNGLDCISAGSTCRSTG------DLELDALHLSRRDNPYL-QILNSRECL---LSESPP-------QSFTSPTRSCDPLIISPEIHSHLVRSPPPISWPISPRSGTFSPIEFSSVDG 149 +P+K + NLF R K ++N + + + P+T + + ++ ST + +++AL +SR DNP+L Q+L SRE L L ES Q F S + DPL + PE+H H++RSPPP+SW PRS F F + DG Sbjct: 15 VATKPIKFLVNLFKRKKANAVNSNNMEASNHSVGVTRIPSTLSVRDILVSTYPTSPLSTPARNRDINTDMEALRISRHDNPFLKQVLASRESLADSLEESESDDTNLMSQEFLSELDT-DPLSL-PEVHEHMIRSPPPVSW---PRSPNFKMFRFPNEDG 169
BLAST of EMLSAG00000009344 vs. nr
Match: gi|939641545|ref|XP_014295329.1| (PREDICTED: uncharacterized protein LOC103578303 [Microplitis demolitor]) HSP 1 Score: 65.4698 bits (158), Expect = 1.211e-8 Identity = 39/82 (47.56%), Postives = 54/82 (65.85%), Query Frame = 0 Query: 67 DLELDALHLSRRDNPYLQILNSRECLL-----SESPPQSFTSPTR-SCDPLIISPEIHSHLVRSPPPISWPISPRSGTFSPI 142 D +++AL LSR+DNP+LQIL SRE L+ SES S DPL ++ ++H HLVRSPPP SWP++P + F+P+ Sbjct: 98 DQDMEALRLSRQDNPFLQILASRESLIESMEESESDDAILMSQELGDGDPLTLA-QVHEHLVRSPPPASWPLTP-AFPFNPV 177
BLAST of EMLSAG00000009344 vs. nr
Match: gi|972186149|ref|XP_015174599.1| (PREDICTED: uncharacterized protein LOC107065425 isoform X2 [Polistes dominula]) HSP 1 Score: 64.3142 bits (155), Expect = 2.292e-8 Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 0 Query: 67 DLELDALHLSRRDNPYLQILNSRECLL-----SESPPQSFTSPTRSC--DPLIISPEIHSHLVRSPPPISWP 131 D +++A+ LSR+DNPYLQ+L SRE L+ SES + S C DPL ++ ++H HLVRSPPP SWP Sbjct: 109 DQDMEAIRLSRQDNPYLQVLASRESLVESIGESESDDANLMS-QEFCDTDPLTLA-QVHEHLVRSPPPASWP 178
BLAST of EMLSAG00000009344 vs. nr
Match: gi|1121181499|ref|XP_019534173.1| (PREDICTED: uncharacterized protein LOC109405537 [Aedes albopictus] >gi|1121181915|ref|XP_019534285.1| PREDICTED: uncharacterized protein LOC109405674 [Aedes albopictus]) HSP 1 Score: 61.6178 bits (148), Expect = 2.667e-8 Identity = 38/88 (43.18%), Postives = 49/88 (55.68%), Query Frame = 0 Query: 68 LELDALHLSRRDNPYLQ-ILNSRECLL-----SESP-------PQSFTSPTRSCDPLIISPEIHSHLVRSPPPISWPISPRSGTFSPI 142 +E L LSR DNP++Q +L SRE +L +ES Q P DPL + P++H H+VRSPPP WP SPRS F+ I Sbjct: 1 MEAVRLRLSRNDNPFIQKVLASRESVLDYADDTESDDAILILMTQDLQDPNSEADPLSL-PQVHEHMVRSPPPAFWPRSPRSSVFNFI 87
BLAST of EMLSAG00000009344 vs. nr
Match: gi|646720815|gb|KDR22412.1| (hypothetical protein L798_02504 [Zootermopsis nevadensis]) HSP 1 Score: 64.6994 bits (156), Expect = 3.885e-8 Identity = 39/83 (46.99%), Postives = 50/83 (60.24%), Query Frame = 0 Query: 67 DLELDALHLSRRDNPYLQILNSRECL---LSESPP-------QSFTSPTRSCDPLIISPEIHSHLVRSPPPISWPISPRSGTF 139 D +++AL LSR+DNP+LQ+L SRE L L ES Q F + DPL + PEIH H++RSPPP +WP SP F Sbjct: 110 DQDMEALRLSRQDNPFLQVLASRESLVDSLEESESDDANLMCQEFPA-DLDVDPLTL-PEIHKHMIRSPPPTTWPKSPNFKVF 190
BLAST of EMLSAG00000009344 vs. nr
Match: gi|972186141|ref|XP_015174595.1| (PREDICTED: uncharacterized protein LOC107065425 isoform X1 [Polistes dominula] >gi|972186143|ref|XP_015174596.1| PREDICTED: uncharacterized protein LOC107065425 isoform X1 [Polistes dominula] >gi|972186145|ref|XP_015174597.1| PREDICTED: uncharacterized protein LOC107065425 isoform X1 [Polistes dominula] >gi|972186147|ref|XP_015174598.1| PREDICTED: uncharacterized protein LOC107065425 isoform X1 [Polistes dominula]) HSP 1 Score: 63.929 bits (154), Expect = 4.650e-8 Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 0 Query: 67 DLELDALHLSRRDNPYLQILNSRECLL-----SESPPQSFTSPTRSC--DPLIISPEIHSHLVRSPPPISWP 131 D +++A+ LSR+DNPYLQ+L SRE L+ SES + S C DPL ++ ++H HLVRSPPP SWP Sbjct: 109 DQDMEAIRLSRQDNPYLQVLASRESLVESIGESESDDANLMS-QEFCDTDPLTLA-QVHEHLVRSPPPASWP 178
BLAST of EMLSAG00000009344 vs. nr
Match: gi|954575920|ref|XP_014612360.1| (PREDICTED: uncharacterized protein LOC106791317 [Polistes canadensis]) HSP 1 Score: 63.929 bits (154), Expect = 4.650e-8 Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 0 Query: 67 DLELDALHLSRRDNPYLQILNSRECLL-----SESPPQSFTSPTR-SCDPLIISPEIHSHLVRSPPPISWP 131 D +++A+ LSR+DNPYLQ+L SRE L+ SES + S DPL ++ ++H HLVRSPPP SWP Sbjct: 109 DQDMEAIRLSRQDNPYLQVLASRESLVESIGESESDDANLMSQELCDTDPLTLA-QVHEHLVRSPPPASWP 178
BLAST of EMLSAG00000009344 vs. nr
Match: gi|755924749|ref|XP_011296978.1| (PREDICTED: uncharacterized protein LOC105262851 isoform X1 [Fopius arisanus]) HSP 1 Score: 63.929 bits (154), Expect = 5.038e-8 Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 0 Query: 67 DLELDALHLSRRDNPYLQILNSRECLL-----SESPPQSFTSPTR-SCDPLIISPEIHSHLVRSPPPISWPISP 134 D +++AL LSR+DNP+LQ+L SRE L+ SES S DPL ++ ++H HLVRSPPP SWP +P Sbjct: 115 DQDMEALRLSRQDNPFLQVLASRESLVESIEESESDDAILMSQELGDTDPLTLA-QVHEHLVRSPPPASWPHTP 187
BLAST of EMLSAG00000009344 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold146_size311726-snap-gene-2.22 (protein:Tk07056 transcript:maker-scaffold146_size311726-snap-gene-2.22-mRNA-1 annotation:"PREDICTED: uncharacterized protein LOC100167760") HSP 1 Score: 102.834 bits (255), Expect = 7.617e-25 Identity = 111/351 (31.62%), Postives = 162/351 (46.15%), Query Frame = 0 Query: 9 NRPLKIITNLFSRGKHKNRSNNGS---NNNKNLLD--HENNPTTPG--------DNGLDCISAGSTCRSTGDLELDALHLSRRDNPYLQILNSRECL-----------------------LSESPPQSFTSPTRSCDPLIISPEIHSHLVRSPPPISW-----PISPRS-GTFSPIEFS--------SVDGLDEYRRSHSEEHILGSRSVTXSMMLSPVRGXXPDIVCSS--PNYYGGERSGGRHSRFANWR---NMDKSTENDLLSPK-------NTPNDDVGATMNFSVDEQDGIHAYRHKFLSGSRSLISNGGNQFYRSNRASSAVRRDSYWQNQWRNKSDIKSMENL 297 RPL+ + NLF KHK++S + N + LD H N + G D D +S+GS E++AL +SR DNPY+Q ++S++ L S + P+ SPT+SC S E +SHLVRSPPP++W P+SPRS GTFSP + S +G++ Y RSHSEEH+L S M+ +PVRG P+++ S P+ G S ++ R R ++ STE D LSP TP+ + S + +H R F S + + G F+ S + + + R +Q D KSME+L Sbjct: 14 TRPLRFLANLFH--KHKSQSAKSAACVNQTSHKLDESHFGNRSLHGPSIGTSTEDAQFDTLSSGSGLPPWLYTEVEALQISRSDNPYIQKMSSQDNLDDCNGYEVGPFVRCASQSIVSGTHSFNSPEPPYSPTKSCG-AHTSSEFYSHLVRSPPPVNWPNRDLPLSPRSNGTFSPADSSDGGLEPTECSNGVNFYLRSHSEEHML---SPCREMLKTPVRGTTPELMTMSMGPDTLGCHMSSPKNPRDYRIRRNYTINLSTE-DTLSPTRRRYDGPTTPSYSTCTMLTTSFTPRY-VHHSRSGFSGRSLTGKKSAGESFFSSWKCTRSRRASEQYQQ------DAKSMESL 350 The following BLAST results are available for this feature:
BLAST of EMLSAG00000009344 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000009344 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 1
BLAST of EMLSAG00000009344 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000009344 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000009344 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 6
BLAST of EMLSAG00000009344 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
Pagesback to top
BLAST of EMLSAG00000009344 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s598:260563..262346- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000009344-692110 ID=EMLSAG00000009344-692110|Name=EMLSAG00000009344|organism=Lepeophtheirus salmonis|type=gene|length=1784bp|location=Sequence derived from alignment at LSalAtl2s598:260563..262346- (Lepeophtheirus salmonis)back to top Add to Basket
|