EMLSAG00000009395, EMLSAG00000009395-692161 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000009395 vs. C. finmarchicus
Match: gi|592799608|gb|GAXK01154960.1| (TSA: Calanus finmarchicus comp703594_c1_seq18 transcribed RNA sequence) HSP 1 Score: 39.2762 bits (90), Expect = 3.371e-2 Identity = 36/132 (27.27%), Postives = 57/132 (43.18%), Query Frame = 0 Query: 403 HCVAEVNSTHSFVAGGFSSG------EPN--RKAWIYAWWEDTWTELTPMPSAVPFPRCSKYTKKG---DILIA------------TLERAMTFNVSTYKWLEVGR-PGRLHTDGELIFGGEDVGTYLIGGR 510 HC ++NS+H+ VAGG +G PN +AWI + E WT + A CS +G ++L+ L+ +N +T +W + + P + G L G+ + LIGGR Sbjct: 1658 HCAVQLNSSHTLVAGGAVTGLAGFGESPNFSNQAWILS--EAGWTAAGDLVQARSVHSCSTVVTRGGEVEVLVVGGIGLSRVGTRMVLDSVEIYNAATGRWRKGDKLPYPVFGAGLLELAGQPL---LIGGR 2038
BLAST of EMLSAG00000009395 vs. C. finmarchicus
Match: gi|592799613|gb|GAXK01154955.1| (TSA: Calanus finmarchicus comp703594_c1_seq13 transcribed RNA sequence) HSP 1 Score: 39.6614 bits (91), Expect = 3.375e-2 Identity = 36/132 (27.27%), Postives = 57/132 (43.18%), Query Frame = 0 Query: 403 HCVAEVNSTHSFVAGGFSSG------EPN--RKAWIYAWWEDTWTELTPMPSAVPFPRCSKYTKKG---DILIA------------TLERAMTFNVSTYKWLEVGR-PGRLHTDGELIFGGEDVGTYLIGGR 510 HC ++NS+H+ VAGG +G PN +AWI + E WT + A CS +G ++L+ L+ +N +T +W + + P + G L G+ + LIGGR Sbjct: 2084 HCAVQLNSSHTLVAGGAVTGLAGFGESPNFSNQAWILS--EAGWTAAGDLVQARSVHSCSTVVTRGGEVEVLVVGGIGLSRVGTRMVLDSVEIYNAATGRWRKGDKLPYPVFGAGLLELAGQPM---LIGGR 2464
BLAST of EMLSAG00000009395 vs. C. finmarchicus
Match: gi|592799614|gb|GAXK01154954.1| (TSA: Calanus finmarchicus comp703594_c1_seq12 transcribed RNA sequence) HSP 1 Score: 39.6614 bits (91), Expect = 3.404e-2 Identity = 36/132 (27.27%), Postives = 57/132 (43.18%), Query Frame = 0 Query: 403 HCVAEVNSTHSFVAGGFSSG------EPN--RKAWIYAWWEDTWTELTPMPSAVPFPRCSKYTKKG---DILIA------------TLERAMTFNVSTYKWLEVGR-PGRLHTDGELIFGGEDVGTYLIGGR 510 HC ++NS+H+ VAGG +G PN +AWI + E WT + A CS +G ++L+ L+ +N +T +W + + P + G L G+ + LIGGR Sbjct: 2198 HCAVQLNSSHTLVAGGAVTGLAGFGESPNFSNQAWILS--EAGWTAAGDLVQARSVHSCSTVVTRGGEVEVLVVGGIGLSRVGTRMVLDSVEIYNAATGRWRKGDKLPYPVFGAGLLELAGQPM---LIGGR 2578
BLAST of EMLSAG00000009395 vs. C. finmarchicus
Match: gi|592799616|gb|GAXK01154952.1| (TSA: Calanus finmarchicus comp703594_c1_seq10 transcribed RNA sequence) HSP 1 Score: 39.6614 bits (91), Expect = 3.406e-2 Identity = 36/132 (27.27%), Postives = 57/132 (43.18%), Query Frame = 0 Query: 403 HCVAEVNSTHSFVAGGFSSG------EPN--RKAWIYAWWEDTWTELTPMPSAVPFPRCSKYTKKG---DILIA------------TLERAMTFNVSTYKWLEVGR-PGRLHTDGELIFGGEDVGTYLIGGR 510 HC ++NS+H+ VAGG +G PN +AWI + E WT + A CS +G ++L+ L+ +N +T +W + + P + G L G+ + LIGGR Sbjct: 2210 HCAVQLNSSHTLVAGGAVTGLAGFGESPNFSNQAWILS--EAGWTAAGDLVQARSVHSCSTVVTRGGEVEVLVVGGIGLSRVGTRMVLDSVEIYNAATGRWRKGDKLPYPVFGAGLLELAGQPM---LIGGR 2590
BLAST of EMLSAG00000009395 vs. C. finmarchicus
Match: gi|592799620|gb|GAXK01154948.1| (TSA: Calanus finmarchicus comp703594_c1_seq6 transcribed RNA sequence) HSP 1 Score: 39.6614 bits (91), Expect = 3.434e-2 Identity = 36/132 (27.27%), Postives = 57/132 (43.18%), Query Frame = 0 Query: 403 HCVAEVNSTHSFVAGGFSSG------EPN--RKAWIYAWWEDTWTELTPMPSAVPFPRCSKYTKKG---DILIA------------TLERAMTFNVSTYKWLEVGR-PGRLHTDGELIFGGEDVGTYLIGGR 510 HC ++NS+H+ VAGG +G PN +AWI + E WT + A CS +G ++L+ L+ +N +T +W + + P + G L G+ + LIGGR Sbjct: 2332 HCAVQLNSSHTLVAGGAVTGLAGFGESPNFSNQAWILS--EAGWTAAGDLVQARSVHSCSTVVTRGGEVEVLVVGGIGLSRVGTRMVLDSVEIYNAATGRWRKGDKLPYPVFGAGLLELAGQPM---LIGGR 2712
BLAST of EMLSAG00000009395 vs. C. finmarchicus
Match: gi|592799621|gb|GAXK01154947.1| (TSA: Calanus finmarchicus comp703594_c1_seq5 transcribed RNA sequence) HSP 1 Score: 39.2762 bits (90), Expect = 3.529e-2 Identity = 36/132 (27.27%), Postives = 57/132 (43.18%), Query Frame = 0 Query: 403 HCVAEVNSTHSFVAGGFSSG------EPN--RKAWIYAWWEDTWTELTPMPSAVPFPRCSKYTKKG---DILIA------------TLERAMTFNVSTYKWLEVGR-PGRLHTDGELIFGGEDVGTYLIGGR 510 HC ++NS+H+ VAGG +G PN +AWI + E WT + A CS +G ++L+ L+ +N +T +W + + P + G L G+ + LIGGR Sbjct: 2240 HCAVQLNSSHTLVAGGAVTGLAGFGESPNFSNQAWILS--EAGWTAAGDLVQARSVHSCSTVVTRGGEVEVLVVGGIGLSRVGTRMVLDSVEIYNAATGRWRKGDKLPYPVFGAGLLELAGQPL---LIGGR 2620
BLAST of EMLSAG00000009395 vs. C. finmarchicus
Match: gi|592799625|gb|GAXK01154943.1| (TSA: Calanus finmarchicus comp703594_c1_seq1 transcribed RNA sequence) HSP 1 Score: 39.2762 bits (90), Expect = 3.556e-2 Identity = 36/132 (27.27%), Postives = 57/132 (43.18%), Query Frame = 0 Query: 403 HCVAEVNSTHSFVAGGFSSG------EPN--RKAWIYAWWEDTWTELTPMPSAVPFPRCSKYTKKG---DILIA------------TLERAMTFNVSTYKWLEVGR-PGRLHTDGELIFGGEDVGTYLIGGR 510 HC ++NS+H+ VAGG +G PN +AWI + E WT + A CS +G ++L+ L+ +N +T +W + + P + G L G+ + LIGGR Sbjct: 2374 HCAVQLNSSHTLVAGGAVTGLAGFGESPNFSNQAWILS--EAGWTAAGDLVQARSVHSCSTVVTRGGEVEVLVVGGIGLSRVGTRMVLDSVEIYNAATGRWRKGDKLPYPVFGAGLLELAGQPL---LIGGR 2754
BLAST of EMLSAG00000009395 vs. C. finmarchicus
Match: gi|592799598|gb|GAXK01154970.1| (TSA: Calanus finmarchicus comp703594_c1_seq28 transcribed RNA sequence) HSP 1 Score: 39.2762 bits (90), Expect = 3.658e-2 Identity = 36/132 (27.27%), Postives = 57/132 (43.18%), Query Frame = 0 Query: 403 HCVAEVNSTHSFVAGGFSSG------EPN--RKAWIYAWWEDTWTELTPMPSAVPFPRCSKYTKKG---DILIA------------TLERAMTFNVSTYKWLEVGR-PGRLHTDGELIFGGEDVGTYLIGGR 510 HC ++NS+H+ VAGG +G PN +AWI + E WT + A CS +G ++L+ L+ +N +T +W + + P + G L G+ + LIGGR Sbjct: 1658 HCAVQLNSSHTLVAGGAVTGLAGFGESPNFSNQAWILS--EAGWTAAGDLVQARSVHSCSTVVTRGGEVEVLVVGGIGLSRVGTRMVLDSVEIYNAATGRWRKGDKLPYPVFGAGLLELAGQPM---LIGGR 2038
BLAST of EMLSAG00000009395 vs. C. finmarchicus
Match: gi|592799617|gb|GAXK01154951.1| (TSA: Calanus finmarchicus comp703594_c1_seq9 transcribed RNA sequence) HSP 1 Score: 39.2762 bits (90), Expect = 3.848e-2 Identity = 36/132 (27.27%), Postives = 57/132 (43.18%), Query Frame = 0 Query: 403 HCVAEVNSTHSFVAGGFSSG------EPN--RKAWIYAWWEDTWTELTPMPSAVPFPRCSKYTKKG---DILIA------------TLERAMTFNVSTYKWLEVGR-PGRLHTDGELIFGGEDVGTYLIGGR 510 HC ++NS+H+ VAGG +G PN +AWI + E WT + A CS +G ++L+ L+ +N +T +W + + P + G L G+ + LIGGR Sbjct: 2240 HCAVQLNSSHTLVAGGAVTGLAGFGESPNFSNQAWILS--EAGWTAAGDLVQARSVHSCSTVVTRGGEVEVLVVGGIGLSRVGTRMVLDSVEIYNAATGRWRKGDKLPYPVFGAGLLELAGQPM---LIGGR 2620
BLAST of EMLSAG00000009395 vs. C. finmarchicus
Match: gi|592799622|gb|GAXK01154946.1| (TSA: Calanus finmarchicus comp703594_c1_seq4 transcribed RNA sequence) HSP 1 Score: 39.2762 bits (90), Expect = 3.881e-2 Identity = 36/132 (27.27%), Postives = 57/132 (43.18%), Query Frame = 0 Query: 403 HCVAEVNSTHSFVAGGFSSG------EPN--RKAWIYAWWEDTWTELTPMPSAVPFPRCSKYTKKG---DILIA------------TLERAMTFNVSTYKWLEVGR-PGRLHTDGELIFGGEDVGTYLIGGR 510 HC ++NS+H+ VAGG +G PN +AWI + E WT + A CS +G ++L+ L+ +N +T +W + + P + G L G+ + LIGGR Sbjct: 2374 HCAVQLNSSHTLVAGGAVTGLAGFGESPNFSNQAWILS--EAGWTAAGDLVQARSVHSCSTVVTRGGEVEVLVVGGIGLSRVGTRMVLDSVEIYNAATGRWRKGDKLPYPVFGAGLLELAGQPM---LIGGR 2754
BLAST of EMLSAG00000009395 vs. L. salmonis peptides
Match: EMLSAP00000009395 (pep:novel supercontig:LSalAtl2s:LSalAtl2s5:30197:50078:-1 gene:EMLSAG00000009395 transcript:EMLSAT00000009395 description:"maker-LSalAtl2s5-snap-gene-0.5") HSP 1 Score: 1159.05 bits (2997), Expect = 0.000e+0 Identity = 555/555 (100.00%), Postives = 555/555 (100.00%), Query Frame = 0 Query: 1 MFDSLVGTSVFLNMSRSAKDSCKFLYKYLPTLLLLTIRPTACVHRDTVKLLKVVEWNDKEELDLEKEYLSLEKHNVFRAGTPVREWLNDVNKEMANFSQVVHVLEILETESYSIEDMVFLGTQVDLTPGIWEKNHSRDDGIKNLLYSACSVYDNNDDCFHLLYFMAKSNVKRLGLLNHIAKLSTKLSGLKLLLTIYNKESKRAYGMDRDLFKDISHKFEACNFCGFYYMDHDKQKFLKDYVRMMRIPSLFEETEECYKKCHIGEYPVIMVIHKDRAYLTSQDRIKCNHAFMKLKEPLPIRRHTDAVAGLINDTLIICDSGVVSFRFQGRGMSGECFRLQVNSSIDDYEINFHDMVARIIYDNINFKHVTVYQSGGFIIRNTSLRTEGYTTSGIFGKRYITTDHCVAEVNSTHSFVAGGFSSGEPNRKAWIYAWWEDTWTELTPMPSAVPFPRCSKYTKKGDILIATLERAMTFNVSTYKWLEVGRPGRLHTDGELIFGGEDVGTYLIGGRRTYKFTGEMWIELHGWXNNLNANPILASIPIHPNSRLIPRCFPTI 555 MFDSLVGTSVFLNMSRSAKDSCKFLYKYLPTLLLLTIRPTACVHRDTVKLLKVVEWNDKEELDLEKEYLSLEKHNVFRAGTPVREWLNDVNKEMANFSQVVHVLEILETESYSIEDMVFLGTQVDLTPGIWEKNHSRDDGIKNLLYSACSVYDNNDDCFHLLYFMAKSNVKRLGLLNHIAKLSTKLSGLKLLLTIYNKESKRAYGMDRDLFKDISHKFEACNFCGFYYMDHDKQKFLKDYVRMMRIPSLFEETEECYKKCHIGEYPVIMVIHKDRAYLTSQDRIKCNHAFMKLKEPLPIRRHTDAVAGLINDTLIICDSGVVSFRFQGRGMSGECFRLQVNSSIDDYEINFHDMVARIIYDNINFKHVTVYQSGGFIIRNTSLRTEGYTTSGIFGKRYITTDHCVAEVNSTHSFVAGGFSSGEPNRKAWIYAWWEDTWTELTPMPSAVPFPRCSKYTKKGDILIATLERAMTFNVSTYKWLEVGRPGRLHTDGELIFGGEDVGTYLIGGRRTYKFTGEMWIELHGWXNNLNANPILASIPIHPNSRLIPRCFPTI Sbjct: 1 MFDSLVGTSVFLNMSRSAKDSCKFLYKYLPTLLLLTIRPTACVHRDTVKLLKVVEWNDKEELDLEKEYLSLEKHNVFRAGTPVREWLNDVNKEMANFSQVVHVLEILETESYSIEDMVFLGTQVDLTPGIWEKNHSRDDGIKNLLYSACSVYDNNDDCFHLLYFMAKSNVKRLGLLNHIAKLSTKLSGLKLLLTIYNKESKRAYGMDRDLFKDISHKFEACNFCGFYYMDHDKQKFLKDYVRMMRIPSLFEETEECYKKCHIGEYPVIMVIHKDRAYLTSQDRIKCNHAFMKLKEPLPIRRHTDAVAGLINDTLIICDSGVVSFRFQGRGMSGECFRLQVNSSIDDYEINFHDMVARIIYDNINFKHVTVYQSGGFIIRNTSLRTEGYTTSGIFGKRYITTDHCVAEVNSTHSFVAGGFSSGEPNRKAWIYAWWEDTWTELTPMPSAVPFPRCSKYTKKGDILIATLERAMTFNVSTYKWLEVGRPGRLHTDGELIFGGEDVGTYLIGGRRTYKFTGEMWIELHGWXNNLNANPILASIPIHPNSRLIPRCFPTI 555
BLAST of EMLSAG00000009395 vs. L. salmonis peptides
Match: EMLSAP00000011698 (pep:novel supercontig:LSalAtl2s:LSalAtl2s812:214158:217695:1 gene:EMLSAG00000011698 transcript:EMLSAT00000011698 description:"maker-LSalAtl2s812-snap-gene-1.100") HSP 1 Score: 95.5153 bits (236), Expect = 5.310e-21 Identity = 98/469 (20.90%), Postives = 177/469 (37.74%), Query Frame = 0 Query: 116 DMVFLGTQVDLTPGIWEKNHSR--DDGIKNLLYSACSVYDNNDDCFHLLYFMAKSNVKRLGLLNHIAKLSTKLSG--LKLLLTIYNKESKRAYGMDRDLFKDISHKFEACNFC--------------------GFYYMDHDKQKFLKDYVRMMRIPSLFEETEECYKKCHIGEYPVIMVIHKDRAYLTSQDRIKCNHAFMKLKEPLPIRRHTDAVAGLINDTLIICDSGVVSFRFQGRGM---SGECFRLQVNSSIDDYEINFHDMVARIIYDNINFKHVTVYQSGGFIIRNTSLRTEGYTTSGIFGKRYITTDHCVAEVNSTHSFVAGGF-SSGEPNRKAWIYAWWEDTWTELTPMPSAVPFPRCSKYTKKGDILIATLERAMTFNVSTYKWLEVGRPGRLHTDGELIFGGE----DVGTYLIGG--------RRTYKFTGE--MWIELHGWXNNLNANPILASIPIH 542 D FLG+QVDLT + S+ D ++ + S+ + + D C L Y S + R+ +N + + G LK L + N + Y + DLF + +F C G + +++ F+K ++ P E+ +CY KC + P+++++ ++ S + + ++ AV G+ + + G G+ GE + N FK +YQ+G + +L Y+ HC+ +N + +F+AGG+ + + KAW Y W +W +L PMP CS +GD+L++ ++ +N +T W+ + G L + FGG + G L GG ++F+ WI+ G N + S+P+H Sbjct: 136 DYTFLGSQVDLTSALSRPRRSKRIDTTLRKICSSSSANQETIDACLSLSYIQGMSTLLRVHAINLLKSSTRSNDGKFLKALDNLLNSSLNKLYHENEDLFSSLFKEFNTFTSCTIICPLYERGTPKWNKASLDGSSLITKEQRLFMKMFLSSFLDPE--EQLSQCYNKC-VAASPLVLLLEEENGESVSSSDECVSSRITYPGNFILDTKYDQAVGGITIPVPFVTSKSAFTVIGDGTGLWVTGGERYGPGANP----------------------FKTTHIYQNGNWKA-GPNLPIALYS-------------HCLVHINESFTFLAGGYMNEKQEVDKAWAYDWTSHSWRDLPPMPHPTNKTLCSIMNDEGDVLLSGIDHGFIYNSTTNTWIHLPPGGALPMESR--FGGSMAYAEGGVRLFGGSFDPRGSSNYVFRFSESDLKWIQRDGSLMKDRKNVLAISVPLH 563
BLAST of EMLSAG00000009395 vs. L. salmonis peptides
Match: EMLSAP00000001599 (pep:novel supercontig:LSalAtl2s:LSalAtl2s127:34427:36005:1 gene:EMLSAG00000001599 transcript:EMLSAT00000001599 description:"maker-LSalAtl2s127-snap-gene-0.15") HSP 1 Score: 51.6026 bits (122), Expect = 5.207e-8 Identity = 34/97 (35.05%), Postives = 45/97 (46.39%), Query Frame = 0 Query: 436 DTWTELTPMPSAVPFPRCSKYTKKGDILIATLERAMTFNVSTYKWLEVGRPGRLHTDGELIFGGEDV--GTYLIGGR---------RTYKFTGEMWI 521 D W+E MP + FP+CS +K D+LIA R TF + +W E G G L +L + G YL GG+ + YKF G WI Sbjct: 14 DKWSEANNMPEPIRFPKCSMKNEKNDLLIAGKYRGDTFRMKDMRWTEYGI-GELPATSQLFATMVYLKGGPYLYGGQHQISQEKTNKIYKFIGTSWI 109 The following BLAST results are available for this feature:
BLAST of EMLSAG00000009395 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000009395 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000009395 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000009395 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000009395 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000009395 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000009395 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s5:30197..50078- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000009395-692161 ID=EMLSAG00000009395-692161|Name=EMLSAG00000009395|organism=Lepeophtheirus salmonis|type=gene|length=19882bp|location=Sequence derived from alignment at LSalAtl2s5:30197..50078- (Lepeophtheirus salmonis)back to top Add to Basket
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