EMLSAG00000009464, EMLSAG00000009464-692230 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000009464 vs. C. finmarchicus
Match: gi|592788741|gb|GAXK01165827.1| (TSA: Calanus finmarchicus comp89_c0_seq1 transcribed RNA sequence) HSP 1 Score: 68.5514 bits (166), Expect = 2.565e-14 Identity = 34/69 (49.28%), Postives = 44/69 (63.77%), Query Frame = 0 Query: 21 LLDQLNRDDFSSSLLELPELTKKVPKPRFSDDIVRSKDSHTIERSNLLLLSGQFTPDHAVFLQVSLGSH 89 L D L+ D S LLELPEL ++VP+ R +D+V KDSH ++RS+ L L G+ D VFLQ SL H Sbjct: 428 LPDLLHGHDLSGGLLELPELPQEVPETRLGNDLVGGKDSHPVQRSDWLALCGELAADDTVFLQGSLALH 634
BLAST of EMLSAG00000009464 vs. C. finmarchicus
Match: gi|592898331|gb|GAXK01060044.1| (TSA: Calanus finmarchicus comp4749676_c0_seq1 transcribed RNA sequence) HSP 1 Score: 36.965 bits (84), Expect = 4.626e-3 Identity = 23/68 (33.82%), Postives = 36/68 (52.94%), Query Frame = 0 Query: 17 ERSLLLDQL-NRDDFSSSLLELPELTKKVPKPRFSDDIVRSKDSHTIERSNLLLLSGQFTPDHAVFLQ 83 +R +LLD L + D + SLL L L+ +VP+ S+D+V K +H + + LSG H L+ Sbjct: 34 DRRVLLDNLVHIKDLAGSLLHLGHLSHEVPETALSNDLVGGKKAHAEDGRLGISLSGGSAAHHVELLE 237
BLAST of EMLSAG00000009464 vs. C. finmarchicus
Match: gi|592838786|gb|GAXK01118758.1| (TSA: Calanus finmarchicus comp5315516_c0_seq1 transcribed RNA sequence) HSP 1 Score: 35.8094 bits (81), Expect = 7.982e-3 Identity = 16/47 (34.04%), Postives = 29/47 (61.70%), Query Frame = 0 Query: 16 KERSLLLDQLNRDDFSSSLLELPELTKKVPKPRFSDDIVRSKDSHTI 62 K SLL D ++ ++ + LL L +L ++V + D++RSKD+H + Sbjct: 77 KVGSLLKDLVDGENVAGGLLRLHDLPEEVEEATLCSDVIRSKDTHAV 217
BLAST of EMLSAG00000009464 vs. C. finmarchicus
Match: gi|592915584|gb|GAXK01042791.1| (TSA: Calanus finmarchicus comp6574047_c0_seq1 transcribed RNA sequence) HSP 1 Score: 34.2686 bits (77), Expect = 1.891e-2 Identity = 16/45 (35.56%), Postives = 29/45 (64.44%), Query Frame = 0 Query: 20 LLLDQL-NRDDFSSSLLELPELTKKVPKPRFSDDIVRSKDSHTIE 63 +LL QL D +S L++ EL +++P+ R S D+V +D+H ++ Sbjct: 39 VLLTQLVGGKDLTSGRLQVGELMQEIPEARLSLDVVLGEDTHAVD 173
BLAST of EMLSAG00000009464 vs. C. finmarchicus
Match: gi|592855338|gb|GAXK01102206.1| (TSA: Calanus finmarchicus comp2436478_c1_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 1.869e+0 Identity = 32/87 (36.78%), Postives = 42/87 (48.28%), Query Frame = 0 Query: 11 PVRGSKERSLLLDQLNRDDFSSSLLELPELTKKVPKPRFSDDIVRSKDSHTIERS-NLLLLSGQFTPDHAVFLQVSLGSHSEKRSTR 96 PV G + R LL D + DF+ LL E VP+P D+V +D H ++ S LLS H + L V LG H + R TR Sbjct: 359 PVVGDRSRLLLEDLRDLQDFTVGLLHPVEHGHVVPEPALGVDLVGREDVHLVDVSLAGALLSRGLQASHDLELPV-LGDH-QSRLTR 613
BLAST of EMLSAG00000009464 vs. C. finmarchicus
Match: gi|592855339|gb|GAXK01102205.1| (TSA: Calanus finmarchicus comp2436478_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 1.884e+0 Identity = 32/87 (36.78%), Postives = 42/87 (48.28%), Query Frame = 0 Query: 11 PVRGSKERSLLLDQLNRDDFSSSLLELPELTKKVPKPRFSDDIVRSKDSHTIERS-NLLLLSGQFTPDHAVFLQVSLGSHSEKRSTR 96 PV G + R LL D + DF+ LL E VP+P D+V +D H ++ S LLS H + L V LG H + R TR Sbjct: 44 PVVGDRSRLLLEDLRDLQDFTVGLLHPVEHGHVVPEPALGVDLVGREDVHLVDVSLAGALLSRGLQASHDLELPV-LGDH-QSRLTR 298
BLAST of EMLSAG00000009464 vs. C. finmarchicus
Match: gi|592949311|gb|GAXK01009242.1| (TSA: Calanus finmarchicus comp408767_c0_seq2 transcribed RNA sequence) HSP 1 Score: 28.4906 bits (62), Expect = 5.176e+0 Identity = 15/55 (27.27%), Postives = 31/55 (56.36%), Query Frame = 0 Query: 22 LDQLNRDDFSSSLLELPELTKKVPKPRFSDDIVRSKDSHTIERSNLLLLSGQFTP 76 L Q + + S+S+++ + K+ KPR DI +K++H + +++ + FTP Sbjct: 127 LGQTPKPEISNSVIKNTKTKLKLWKPRVKSDIEAAKENHNADFDSVMNYNSHFTP 291
BLAST of EMLSAG00000009464 vs. C. finmarchicus
Match: gi|592949312|gb|GAXK01009241.1| (TSA: Calanus finmarchicus comp408767_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 7.472e+0 Identity = 15/55 (27.27%), Postives = 31/55 (56.36%), Query Frame = 0 Query: 22 LDQLNRDDFSSSLLELPELTKKVPKPRFSDDIVRSKDSHTIERSNLLLLSGQFTP 76 L Q + + S+S+++ + K+ KPR DI +K++H + +++ + FTP Sbjct: 451 LGQTPKPEISNSVIKNTKTKLKLWKPRVKSDIEAAKENHNADFDSVMNYNSHFTP 615
BLAST of EMLSAG00000009464 vs. L. salmonis peptides
Match: EMLSAP00000009464 (pep:novel supercontig:LSalAtl2s:LSalAtl2s60:129857:130277:1 gene:EMLSAG00000009464 transcript:EMLSAT00000009464 description:"snap_masked-LSalAtl2s60-processed-gene-1.12") HSP 1 Score: 216.853 bits (551), Expect = 1.282e-73 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 Query: 1 MKLPDRRSSHPVRGSKERSLLLDQLNRDDFSSSLLELPELTKKVPKPRFSDDIVRSKDSHTIERSNLLLLSGQFTPDHAVFLQVSLGSHSEKRSTRVETLTGKERRKEEER 111 MKLPDRRSSHPVRGSKERSLLLDQLNRDDFSSSLLELPELTKKVPKPRFSDDIVRSKDSHTIERSNLLLLSGQFTPDHAVFLQVSLGSHSEKRSTRVETLTGKERRKEEER Sbjct: 1 MKLPDRRSSHPVRGSKERSLLLDQLNRDDFSSSLLELPELTKKVPKPRFSDDIVRSKDSHTIERSNLLLLSGQFTPDHAVFLQVSLGSHSEKRSTRVETLTGKERRKEEER 111 The following BLAST results are available for this feature:
BLAST of EMLSAG00000009464 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000009464 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 8
BLAST of EMLSAG00000009464 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000009464 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000009464 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000009464 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000009464 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s60:129857..130277+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000009464-692230 ID=EMLSAG00000009464-692230|Name=EMLSAG00000009464|organism=Lepeophtheirus salmonis|type=gene|length=421bp|location=Sequence derived from alignment at LSalAtl2s60:129857..130277+ (Lepeophtheirus salmonis)back to top Add to Basket
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