EMLSAT00000000006, EMLSAT00000000006-695853 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000006
Unique Name	EMLSAT00000000006-695853
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1003	supercontig	LSalAtl2s1003:20696..26805 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000006 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000006	EMLSAG00000000006-682772	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000000023	EMLSAE00000000023-708951	Lepeophtheirus salmonis	exon
EMLSAE00000000024	EMLSAE00000000024-708952	Lepeophtheirus salmonis	exon
EMLSAE00000000025	EMLSAE00000000025-708953	Lepeophtheirus salmonis	exon
EMLSAE00000000026	EMLSAE00000000026-708954	Lepeophtheirus salmonis	exon
EMLSAE00000000027	EMLSAE00000000027-708955	Lepeophtheirus salmonis	exon
EMLSAE00000000028	EMLSAE00000000028-708956	Lepeophtheirus salmonis	exon
EMLSAE00000000029	EMLSAE00000000029-708957	Lepeophtheirus salmonis	exon
EMLSAE00000000030	EMLSAE00000000030-708958	Lepeophtheirus salmonis	exon
EMLSAE00000000031	EMLSAE00000000031-708959	Lepeophtheirus salmonis	exon
EMLSAE00000000032	EMLSAE00000000032-708960	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto769477	auto769477	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000006	EMLSAP00000000006	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1003:20696..26805+

protein sequence of EMLSAP00000000006

>EMLSAP00000000006 ID=EMLSAP00000000006|Name=EMLSAP00000000006|organism=Lepeophtheirus salmonis|type=polypeptide|length=730bp
MEHNYSSNTGVRLDGSWELTLLVTDLQVEKILRVKGDHHVGGVMIKLVNE
LDIAMDWSDHALWWPDRNKWLEKTRWTLDQYNITADTCVYFTPMHKNIRI
QLPDLRYVDCVMDYSLSLCKPLATDHLKFNYGDYRQEEGKKRRITLKNSL
NTSNSSSPSGTFRRKGNHHIHSVSTSDLSPSXAIVDRPDTNTFIANSTAT
LGRKTSTTSWNGSSSRNYRSLGRNGTLDYHRRKSDFHSQSNHGTLKKNGS
FSPLVNGNDSNLKSGSEWSLAMSPPPSVEAKYSLIRPKNLVERARMNVAW
LDSSLSLMEQGVKDFDTLLLRYKFYSFFDLNPKMDGVRINLIYEQLKWTI
LNENMDCTEEEMMLFAALQLQVSLXANVPQPSEEDEDDDDDVDAALSDLQ
ISLEGEAHRSFINETVNNDIVAIPVLSDHLRYMRPKRFTLKGFKGHYFVL
KELALVAYKNEEDSYNYHTSFSVNLKGCEVSPEVNISRKRYGIKLAIPSA
DGMSDLYLRCISEDQYSKWMAACRLAAKGKTMAXASYDSEVKSILAFLSM
QHPASTPVINPSTLNVDVEEYVASRFLRKMPKSKLRHRILEAHSNVKDLN
LIEAKMNYLKAFQSLPDYGVSLFVVRFHGEKKDELLGVASNRLMRMNLQT
GDPIKTWRYNTIKAWNINWETKHMMIQLGDGKNVIFKCLSADCKVVHEFI
GGYIFLSMRNKDANQIIDEEQFHKLTGGWH

mRNA from alignment at LSalAtl2s1003:20696..26805+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000006-695853 ID=EMLSAT00000000006-695853|Name=EMLSAT00000000006|organism=Lepeophtheirus salmonis|type=mRNA|length=6110bp|location=Sequence derived from alignment at LSalAtl2s1003:20696..26805+ (Lepeophtheirus salmonis)
TTAAAATTGAAAATAGAAGATCCAGTATCTCTATGTAGTCTTTATTGTTT
TTTATTGGAGATGAATTCAGAACGAGCTTTTGATTCTTAGGCTTAGAGGG
TCGAGTTCCACTCCCTCCCTCACACATACTCTCCTTACACTCTTTTTTTT
ATTCTGTCTCTTTGTTTCTTTTTGTCTCTTTTAGTTTATTTGTGTGTTTC
TTTCTTTCCTTCCATTGAGTTTCTTTCTTTCTTTGGTCCCGTCTAGGGAT
TTGTTTTGTTTTTGTTCCCCTTCGTTTTGTTTGTACTTCAATAATATCAT
CATCGTTAATGAGACATTCCTTACTCATAACTTGAGACCATCGTCATGAT
AAGTCCGTTCTACGAATAATCATAGATATCATCATGGAACACAATTACTC
TTCGAATACTGGGGTTCGCCTGGATGGGAGTTGGGAGCTCACTCTTCTTG
TCACGGATCTTCAAGTGGAGAAGATTCTCAGGGTCAAGGGAGATCATCAT
GTTGGAGGTGTCATGATCAAGCTTGTCAATGAACTGGGTAAAGCAAACCT
TGTTGTTCCTGTTCTTGAGATTTAATACATGATAATACGGACTTAATCAT
TAATAATTGATTTGAAGCACTCGATATTATTATTTTATATTGCATAAGTC
CTTGCTCTGATTATTGATGATTRCTGTTGTTGCTTTATTTTTATTCTCTT
TGCCCATAACAGCGACAACAAAGACATAAGAGGAGTGTTCAAAGTTGTAG
TAGGTCTGTTACTTGTCCTTCCTTTCAAATAGGAAATTGTTATTTATTTT
TTAGATATTCATTTTCAATTACTTAAAATATGTTTAAGGTGGAGACGACA
AATTCAATTAGATGCGTGACTCATTTCTACTTTAGGGAAGGACCTTCCCA
TAAAATACTAATAATATAGCATTCATATCATCCCTATTAGACTTTTGTTG
TTGTTTTATGATTCATTTTCATCCCAAATACAGAAATATGCAACAATTCT
CATGTTGATTCTTGGAATGACTAAGAACATAACTAATTAGCAGTAACTTA
GTATGTGGTATGAAATGAAAGATATACTTGCTGTGGGTCCTATCAAATTA
CAAACTACTATCACTTATAATAATTATATTAAATAACTAATAAGTTGCTT
CTATTCAATGTATTCATTTATGTCTCCCTCTTCAAATAATGTTTTCATGC
CCTGAGTTCCTCATATGAATGTATTTCCTTCTCGTCATCAAATATGAATA
AATAGTACTTACAATTCATTTAGACTTTTGTTAGTGTATATTAATAATTA
TGAATGAAATGCAATGAAGGTACCTTGTTCATGTATACAACTTAAAATTA
CAATAAATTGGCGCATCAATATAAAAGCAATTATGAACAAAAATCAATAT
GTTTTTTTTTACTTCATATATACATTATTTCATAGACATAGTTGGGTGAT
TTATAGGCTTACTATTCAAATTACTGGGATGGTTTATTATACTTCAAGAC
TTTTAGCTATAGTTTAGAACATTTATTTAATTTAAGCGACTTATATTGAC
CCCGATATGGTCCCTTTCAAATAAAATTTGTCAAATTCCCCTTATTTTAT
TATGACGATGAATTTTACTATCTAAAGTGCAATTTGCGACGCACCCAAAG
CGTTTATAATAATAATTTTTGAAAATAAATTGACGAATATTCGTATAAGT
GAACAAATGTAATCCTCACTCAATTTTTAGAAAAATCATTCTAGCTCGCT
TTTGTGTTGGCAGACTACATATGTAGTCTCATAACGATCCCCCAATAATA
ACTCAATATATGTATGTATTACCTTATGTAAGCTTCAGAACTATATATTG
TATAAATGTACATTGAACATATTTTATTTGTGTATTAAATTACACATCTT
CAAAATGTCGAAGTCTCGGGTTTCAATAATTATATTCATCTTTTATTTTA
AAAAAAATGTTTTGATATTCATAAATAATAATCTTGATAATTATGACCTC
ACCTCTCCTTTCAGACATTGCTATGGACTGGTCAGATCATGCACTATGGT
GGCCAGATCGAAATAAATGGCTTGAAAAAACGCGTTGGACATTAGATCAG
TATAACATTACTGCTGATACCTGCGTTTATTTTACACCAATGCACAAAAA
CATTAGGATTCAACTACCTGATCTGAGATATGTTGATTGTGTTATGGATT
ATTCCGTACAAGCGTTCTCAGGGTTAAGGACTCTGTGCTCTGATTTAGGT
GAGATTCGTATATATACAGGGTAGGGCTCATGGACTCGAAAGATGGATTT
AGAAATACATCAATAATTTTATATTTTCATTAATATTCAAAAACCAAAAA
AAAAATTAAAACATATGACAAGGTTTTTGCAGAACTTTTTTCACTCAATA
TGGCCACCTTCATTATCAATCACAGCCTTTATATGAAGGCCTTGCAGGAG
TTGATGACAAACTCCTCTGACAAGTTGTCCCATGCGGCCACTATGGAGGA
CTTCAATGAGTCCACGTTTGGGTGTGAGGCCAGCGGTCATTCCGGTGACA
GTGGAATTGATCAACTGTGAAAATCTTCTTGTCCTTGAAAATTCTAACCA
TTGACCCATTTACCTTGATACATGTGAGTATTTCCTTGCACCTCTCAAGC
CTCCTGGCTTTCATGCCCTCTGTCAGAAGGTGGTGTGGGGTCCTTGTGAA
AGAAAGTTAYCCCAAGTTGTGCTTTATAGNNNNNNNNNNNNNNNNGTCTT
AGGAGCCACAGAAGTCGTTAGCGAGGCAATTTATTTACTTAGTGGGATTA
TCCTTTATAATTTTCTCCAAACTTAACAAGAACTTCGTATCCCTCTTTAA
ATTATGCCCTCCACATTAGGACATCCTGTAGAGGTCTTCTCCATTTCTTT
TTTMTTWTTTTCWTCTTGGCCAACTTAAAAACCAGCTCCTAGAACGCAAA
ACAATGTCCGTAATATTCGTCACATCAACTACAGTAAATCTGAGATGCGC
TGCCCTTTTGCTTGTTCCTCGCTCATGATGATGAAATAACTAAAACATTA
GTATGTCTGTTTATGTAAAAAAGACGGCGTAAACAAAATATCTAAAAATT
ATCACTAAAACTTTTCATAGTTATGAGAAAATAAACATTAATTAACAGTC
CACGTTTTGCTGCCCTACATGTATATATATTTATGTATTGTAAAATTGAC
TCATTTGTTTAATTTTTTAAAGGCTTATGTCACATCCTAATCGTAACATT
TTATAATCTATGACTCATCTAATACACATATTATTCATAATATGGTTGCA
TTTTATTTCGACGTTAACATTTTTTAAACAATAATTACATCTAATTTTCT
TATAGAAATACGTCATTTTGAAGAGTTATCTCTTTGCAAACCCCTAGCAA
CTGATCATTTAAAATTTAATTATGGAGATTATAGACAAGAAGAGGGGAAA
AAACGTCGAATAACCTTAAAAAATAGTCTAAATACTTCTAACTCATCGTC
ACCAAGTGGGACTTTTCGACGGAAAGGGAACCATCACATTCATTCTGTTT
CAACTTCGGACTTGAGTCCTTCTMCAGCCATTGTAGATAGGCCAGATACG
AATACATTCATAGCTAATAGTACTGCAACTCTTGGAAGAAAAACATCAAC
GACGAGTTGGAATGGATCTTCCTCACGCAATTATCGATCCTTGGGGAGGA
ATGGAACTTTGGATTATCATCGTAGAAAGAGTGACTTCCATTCACAATCT
AATCATGTAATTTAATTTTAAAAAATGAACAAATTCTTCTTATTGTAAAT
AAGTTTCTCTTTTCATTCATATTTTTAACATTTGATCCTTCAGGGTACTC
TAAAAAAGAATGGTAGTTTTTCCCCACTTGTGAATGGAAATGATTCTAAT
TTAAAATCCGGAAGTGAATGGTCCCTTGCCATGAGTCCTCCTCCTAGTGT
TGAAGCGAAATATTCATTAATAAGGCCAAAGAACTTGGTTGAAAGAGCTA
GGATGAATGTTGCGTCAGTATTTACTAAATTTATTCATTATTAGAATGAG
TCTTTTAAGGTTTTTGTTTTATTTAATAGGTGGCTTGATTCTTCTTTGTC
ATTAATGGAACAAGGAGTCAAAGATTTCGACACTCTATTACTCAGATATA
AGTTTTACTCATTTTTTGACTTAAATCCTAAAATGGATGGTGTTCGTATA
AATCTTATCTATGAACAGCTCAAATGGACAATTTTAAATGAGAATATGGA
TTGCACTGAAGAAGAAATGATGTTGTTTGCTGCGTTGCAGGTATGGAGTT
TTTTTGTTCTTTGATTTAATGCTTGAGATATTTAGATTTTTACTTTTTTT
AAAGCTTCAAGTAAGTCTTMAAGCCAATGTTCCACAGCCCTCTGAAGAAG
ATGAGGACGACGATGATGATGTAGACGCGGCTCTCAGTGATCTACAAATA
TCGTTAGAAGGAGAAGCTCATCGAAGTTTTATAAATGAAACAGTAAATAA
TGATATAGTGGCAATACCAGTTCTATCGGATCATCTAAGATATATGAGGT
TTGAAAGATTGCTTTTATTTTAATTACGTTTGTAGTAATAAGAAGGCTTT
GTTCCCTCCCATGTATTTTCAGGCCTAAAAGATTTACTTTAAAGGGCTTT
AAGGGTCATTATTTCGTCTTGAAAGAATTAGCTTTGGTTGCTTATAAGAA
CGAAGAAGACAGTTACAATTATCATACAAGCTTTTCCGTCAATCTAAAAG
GTTGTGAAGTTAGTCCAGAAGTGAATATATCTAGAAAACGCTACGGAATC
AAGCTAGCAATTCCTTCTGCAGACGGAATGTCTGATTTATATCTCCGTTG
CATTTCGGTAATTAATCACTTTGATTATTTTTTAGTTGATTTGTTCATAA
ATTATGTATACACCATATTTATAAATGTATAGGAGGATCAGTATTCTAAA
TGGATGGCGGCCTGTCGACTTGCTGCCAAAGGCAAAACAATGGCGGRTGC
TAGTTATGATTCAGAGGTTAAGTCAATTTTAGCCTTTCTTTCAATGCAAC
ATCCGGCTTCAACCCCAGTGATAAACCCATCTACACTAAATGTAGATGTG
GAAGAATATGTTGCATCCCGTTTTCTTCGTAAAATGCCAAAGTCTAAACT
TCGCCATAGAATTTTGGAGGCTCACTCAAATGTGAAGGATCTAAATTTAA
TCGAAGCAAAAATGAACTATTTAAAGGCTTTTCAATCTCTTCCGGACTAT
GGAGTATCTTTGTTTGTTGTTCGTTTTCACGGAGAAAAGAAAGATGAGCT
TCTAGGGGTTGCATCTAATCGTCTGATGCGAATGAATCTTCAAACAGGGG
ATCCAATTAAGACCTGGAGATATAATACTATCAAAGTAAATATATATTGA
ATATATTATGACGAGAAAAATATATGAGTTGGGTTGCATAATTTTTAATA
GGCTTGGAACATTAATTGGGAAACTAAACATATGATGATCCAATTAGGAG
ATGGAAAAAATGTTATTTTCAAGTGTCTTTCCGCTGACTGCAAAGTTGTT
CATGAATTTATTGGTGGTTATATATTCTTGTCTATGAGGAATAAAGATGC
AAATCAAATTATAGATGAAGAACAATTTCATAAGCTAACTGGAGGCTGGC
ATTAAATGCTCTTCTCAGAAAATAAGTCTGGTTTTTTATGTAATAATTAT
AATTATCGATGAAGGTGTTTTTGTTTAAATATTTTAATAGCCTTGTTTTT
CATTAATACTGAAAGAATCCCTTTTTAAGTTCATACAAACTTAGAAAGTC
TGAAAAGATTTTTTATTTTTTTCCTGTTCTTTGTGTCTCCATCCTTTAGA
CAATCTTAATCGTTCTGCCTACTTCACCGTTTTAAAGGTTAATAATATTT
AATCAGAAATTTGGAAAAAGTAGGCAATTATAACTAATTTTACCGGTTAC
ATTAGTGTATTTCTAATTGAGAAAGTTCCTTTTTATATAATGCTTCCGTA
CAAAATAACATGCATTTGAAATTTAACAACATGCTTTATTTCTGTGATTA
TTATTTAAGTAAATATGGGCCAAAATATTTTTAATAGAATTTATATGTAT
TTTATCAATC

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