EMLSAT00000000023, EMLSAT00000000023-695870 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000023
Unique NameEMLSAT00000000023-695870
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1005supercontigLSalAtl2s1005:1582..2451 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000023 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000023EMLSAG00000000023-682789Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000092EMLSAE00000000092-709020Lepeophtheirus salmonisexon
EMLSAE00000000093EMLSAE00000000093-709021Lepeophtheirus salmonisexon
EMLSAE00000000094EMLSAE00000000094-709022Lepeophtheirus salmonisexon
EMLSAE00000000095EMLSAE00000000095-709023Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768172auto768172Lepeophtheirus salmonispolypeptide
EMLSAP00000000023EMLSAP00000000023Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000023

>EMLSAP00000000023 ID=EMLSAP00000000023|Name=EMLSAP00000000023|organism=Lepeophtheirus salmonis|type=polypeptide|length=176bp
AEDVQXIAAEHDLFSISGDEQKVGVSKITYHEKFGSHGTNYDVCLLKLKS
SLDLNEKVKPVALPEKDQEFTGDVVVSGWGTIXSNGPSXPVLRSVTVHVV
SDEDCSDAYFGSTDETMICAAAPGKDSCQGDSGGPLAQDGTLVGIVSWGX
XGCAAPGYPGVYGKVSKFIDWIAETK
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mRNA from alignment at LSalAtl2s1005:1582..2451+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000023-695870 ID=EMLSAT00000000023-695870|Name=EMLSAT00000000023|organism=Lepeophtheirus salmonis|type=mRNA|length=870bp|location=Sequence derived from alignment at LSalAtl2s1005:1582..2451+ (Lepeophtheirus salmonis)
GCCGAAGACGTTCAAAYCATTGCTGCTGAACACGATCTCTTCTCTATAAG
TGGAGATGAACAAAAGGTTGGTGTATCAAAAATCACCTACCACGAGAAGT
TTGGATCCCATGGCACCAACTATGACGTTTGTCTTTTGAAATTGAAGTCC
TCCTTGGACCTCAACGAGTAAGAACTTTCTCATACAATTTTTGTTTTTGT
CAATAATTGATAACTCTTCATATTTTCTAGGAAAGTCAAGCCWGTTGCTC
TCCCAGAAAAGGACCAAGAATTCACTGGTGATGTTGTTGTGTCTGGRTGG
GGAACTATCKCCTCCAATGGCCCATCTTSTCCAGTCCTTAGATCAGTTAC
CGTCCACGTTGTTTCTGATGAGGGTGAGACTATAATTATATTTTTACCTT
GAAAACGAATTTACCTCTGTAATGTTTAATATAATAGACTGTAGCGATGC
CTACTTTGGATCTACTGATGAGACCATGATCTGTGCTGCTGCTCCAGGAA
AGGACTCCTGCCAAGGTGACTCTGGTGGTCCATTGGCTCAAGATGGAACC
TTAGTTGGTATTGTTTCTTGGGGATANNNTGGTTGTGCTGCTCCTGGATA
CCCAGGTGTCTACGGCAAGGTCTCCAAGTTTATTGACTGGATCGCTGAAA
CAAAATAATTTATTAGGTTATTGATTTTGAACTTTTGAAATATAATATTT
TCAAAAAATTGATTGTTTGTTGTATATCTCCAGATGAAATTGACAATAGG
TGGAGCAAGGTGGATTCAGTGTAAAACACAGGATAAAATCAAATCAGGAA
AACAAATTAAAAAATAAAATGTATAGAAAATGAGTAACAGGACGGGATTA
CTTTAAAAAACTTGGGGGGG
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