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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s100 | supercontig | LSalAtl2s100:121897..127561 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000052 >EMLSAP00000000052 ID=EMLSAP00000000052|Name=EMLSAP00000000052|organism=Lepeophtheirus salmonis|type=polypeptide|length=1153bp
METEEEDRDDILRNGASEDSDDYQLRGIDVTAESPNAFSEETSVRFAGEE
ELSDESCGYTEPTRIRNGNDAGPHEHPWNVALLYKNDTMSKVLCGGVLIS
ETEALTAAHCVRDFKGLLLTSILIGHSDINKATEVNLTGVTLHPNYSRTP
IIVNDIAILHFDSIESIAEEVKIICMPLSDKFTRKDKYGVVSGWGVTELS
LFSDNLKRLDVEIVEFEECQSLYKKKNKAFTLKDSQICASGQKEDSDSCS
GDSGSPLLYYEPIEGRAVLLGLTSFGTRRCDSSVPGVYSKISSHLPWLRX
AIAHARSILSPKKMSVVGIDFGNENCYISVARAGGIESIANDYSMRDTPS
YVAFGDKQRLMGVAAKSQHLTNLKKTFFGFKPLIGRKFKDPIVQNELKRI
PYPVSEDPETGNVLLHVDYLGKSHSFTPKQVTSMLFTKLKHTAEAALNTK
VKDVVISVPTYYTDCERRCILDAANMADLNVLKLMNDTTATALAYGIYKQ
DLPPPEEKARNVIFVDVGHRGAQAAACSFNKGKLSMVCNTFDANLGGRNL
NENIARYFADGFKKSYKIDVYSSPKAMIKLITEVEKLKKQMSANTNKLPL
NIECFMDDKDVKGYIDRTTFEEISQVEISRMEKILTDCLAQSKWKKEDIY
SVEIVGGSTRVPFVKTAMERVFGKVPNTTLNADEAVSRGCALQCAILSPT
FKVREFSVLDSQPYPILLKWQTGADIGEMEVFSKFQSIPFSKMLTFWQPD
NFKLVVEYAGKDVTMNPHIGEFEISVTPKPDGSNTKVKVKARINLNGIFA
IVSATKSEKHEIEEEVQMEVEEEKKPASANSGDKATNNTTSEDVNMDEPN
EKATTEDKKDEKTPTSPPKMEKQKKIITKIIDXPVCSRVVGSLTDEGLTN
LSGIERNFVKQDQMESDRLTYKNAVEEYVYDIRSKIHGDLSEFITDEDRG
KYSNELEDSENWLYEDGEDVEKKVYVEKLNHLQVVGEALKRRKYEFDQRP
HAFNTLGHCLNMATKVIDAFRSGDEKYNHLDTEAVNKVNNMIIEKNKWLS
SSIHTLKDLDKTSDPSILVSYFYEEKKNFEAFAHPILHKAKPKVEPPPPP
PTTQPNPEDDKTKNNAADNNTEGGDNSTSGMGEGAPPKPNKRTWEKRLPR
LWL back to topmRNA from alignment at LSalAtl2s100:121897..127561+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000052-695899 ID=EMLSAT00000000052-695899|Name=EMLSAT00000000052|organism=Lepeophtheirus salmonis|type=mRNA|length=5665bp|location=Sequence derived from alignment at LSalAtl2s100:121897..127561+ (Lepeophtheirus salmonis)
GACCGGGTCAAATTATATGTTTGAAGGGATCTTCTAGGTGCTTCTTTGTC
ATTTTGATGAAGGAGGATTGTGATGTGAGTGTTCCAGTGTTCTAACATGA
AGTCTATAGCTAAAGAAATGAATTGCCATTTCGCGATGACAAATAAGAAA
TTAATAGGGAATTTGAAAGGTTGTTCTTGTAGTTGTCGTCGTCGTGAATG
GGGAATTTATTATTGAGTATTTCAAGTTTTCCTCCTTTTATTTATATTTG
ACGAAATACCTAAGTACCAAGTAGTGATACATGATAATTATTCCCCTCTT
GCCATATTGGCATCGCACGCTTTTACTAAGTATTAACTAGAACGGTGGGT
CGTTCTTTGGGTTTCCCATTCCATTCTCACTATACATGCAATGTAATAGA
ATACTATGAGTATGTAATAATAGAAAAACATGATKCCCAAGAAGCGAGCC
TCTCAAACTATCAAAGCGATCAATTTATTCAGGAAATAGATCTCTCACAA
GGATCATCACCATCATCATGTCTCACATCCTTGCAGTTCATTTTCATACT
ATTTTTTCTCCTTTTTTGGACTGGAGCCGGCCTTTTTCACCTATCTCATG
TCCCTCTCATTGAGGGCAGTATCATTTTCTTTCAAAGCTCCGTCACGGAT
GCACTAAGATCGTCTATTAATACAACTCCTCACACCACTCCTTCATCTTC
CTCTCAAAATATTTGCAAACTCGTTGAAGATTGTCCACATTTAGAGACAT
TATCCAATGAGGAACTATCCAAAATTCGTCCTTGTCGCTTTGAGGAAAAT
AGASCCTACTACCCATGTCTACCTCCGTCACCCTCAACATCATCKCTCGA
ACCGCAAAACACAGGTTGGAATCCATTAATTCGTATCAATTGTAGTCTGA
GTGAAATAGTTCTCATTTTTTTTTTTTTTAATGATTTCTTTAAAGAAATT
TCTTCTTTCGGATCTTTTTACACTTTAGAATTAAAGTTCCAACCTGTATT
TCTTTAGTAAAACCTAGCAAGAAGACAGCATCTGTGGCATCATGCAGTAG
CTGTCTACTTGGAACGATATGTCCTGAAACAAATGCTCTTCTTGTTGAAA
AAAAATTTGAGACATTAAAATCCGGTTTTAGTCTTTGCGGATTTGAAAAT
AGACACCCCAAGTTTTGCTGTCCTTCTATGGAAACAGAGGAGGAGGATAG
GGACGACATACTCAGAAATGGTGCCTCGGAAGACTCAGATGATTATCAAT
TGAGGGGTATAGATGTGACAGCTGAGAGTCCTAATGCCTTTTCTGAAGAA
ACATCAGTTAGATTTGCTGGTGAGGAAGAGCTGTCTGATGAGTCTTGTGG
ATATACAGAGCCTACAAGGATTAGAAATGGTAATGATGCAGGTCCACATG
AGCATCCATGGAATGTGGCTCTTCTGTATAAAAATGACACTATGAGTAAA
GTTCTCTGCGGTGGAGTTCTTATCTCCGAAACAGAAGCCTTGACAGCGGC
TCATTGTGTCCGAGACTTTAAAGGACTTTTGTTAACGAGTATTCTTATTG
GCCATTCCGACATTAATAAGGCAACTGAGGTCAATTTGACGGGCGTTACT
CTTCATCCCAATTACTCAAGAACACCTATTATTGTGAATGATATTGCCAT
TCTTCACTTTGATTCCATTGAGTCCATTGCTGAGGAAGTAAAAATCATTT
GCATGCCTCTGTCTGACAAGTTTACTAGAAAAGACAAATATGGTGTCGTT
TCGGGTTGGGGAGTCACGGAGTTGTCTCTTTTTTCTGATAATCTCAAACG
GCTTGATGTCGAAATAGTTGAGTTTGAGGAGTGTCAGAGTCTTTATAAAA
AGAAAAATAAGGCATTCACTCTGAAAGATTCGCAAATCTGCGCTTCTGGG
CAAAAGGAGGATAGTGACTCCTGTAGTGGTGACTCGGGYTCGCCTTTACT
TTACTATGAACCAATTGAAGGACGGGCTGTTCTCCTTGGATTAACATCAT
TTGGAACACGAAGGTGTGATAGTTCAGTTCCTGGTGTCTATAGTAAAATT
TCTTCTCATTTGCCATGGCTCCGASCTGCCATAGCCCATGCAAGATCCAT
ACTCTCGCCAAAAAAGTCATAACTTCTTCCTTCCCTCTTTCTTTCTACTC
TCACTTCGTTAATATTGAAGTTGTACAATTTCGTGTCTGCTTACTATTCA
TAAGTCATAAGATATTTAATAATATGTTTGTGTCTCTCATTTTATTATAA
ATTTTACATGCGTGTCATGTGATTCTTAAGAGGTTATGAATTTATTAGAT
GTTGTTATTTTGTGTATTACTACAACTTATACTCTACTTTTAATTTTGAA
ATACATCACTCTGTCTGTTCCAAATATTTTTGTAGAGCTTCCAATTTTAG
GTATGACATTATATATTTGTAGTGTGGGATGTTATGTTTTATTTATATTT
AGGGAAATTGATAATGTGTATGGTCTTCTGAAGATAAAGGTTTGTGAAGG
GCGTTTCAAATATAGGATGTGTAGGATGAATTAGCATTTCACATAAACTG
CAATTTGCAACTGGATTTCTTCGAAAAATATTTGAGTCATTACTTCCCCT
CCCCCCCCTTTATTTACCACCCAAAGCGACAACAGAATAAGTGGGGATAA
TGCGTTAGAATTGATGTATTGCCAAAACTTAATAAATAATAATTAAAATA
TTTACTTACTGTGTTATTTCTTGATATTATTAATGACTAAATAAAGGACT
CACTTCATTACAATTCTTTAAAAAATTCAGGAATCGATTTTTTAAATATA
TATATTATGTATTAGCATTTATTAACTAATATTTATGTAGTATGAATTTC
AATCATTTGTAAGACCTGCAATAACCAATTAATTATTTGACGCGCTCAAT
TTAGTAATATTATTTTTTTATATTTATTCCAGAATGTCAGTCGTTGGAAT
CGACTTCGGCAATGAAAATTGCTATATTTCAGTTGCCCGCGCTGGAGGCA
TTGAGTCTATAGCTAATGACTACAGCATGAGGGATACTCCTTCCTACGTT
GCATTTGGTGATAAACAACGTTTAATGGGAGTTGCTGCCAAGAGCCAACA
TTTAACCAACTTAAAAAAAACATTTTTCGGTTTTAAACCCTTGATTGGTC
GTAAATTTAAGGATCCTATAGTTCAAAATGAATTGAAGAGGATACCCTAT
CCTGTAAGCGAGGATCCTGAGACAGGGAATGTTTTATTGCATGTGGATTA
CTTGGGTAAATCTCACTCTTTTACTCCTAAGCAAGTGACATCCATGCTTT
TCACAAAGCTTAAGCATACTGCGGAAGCTGCTCTTAATACCAAAGTCAAG
GATGTTGTTATTTCTGTTCCAACTTACTACACAGATTGTGAAAGAAGATG
CATTTTAGATGCTGCAAATATGGCGGATTTAAACGTTCTTAAACTCATGA
ATGATACAACTGCTACTGCTCTTGCTTATGGTATTTACAAACAGGATTTA
CCTCCACCAGAGGAAAAGGCGCGTAATGTGATATTCGTTGATGTTGGACA
CAGGGGGGCTCAGGCTGCTGCCTGTTCATTCAACAAAGGAAAACTCTCCA
TGGTTTGTAACACTTTTGATGCAAACCTGGGTGGAAGGAACCTCAATGAA
AATATTGCACGATATTTTGCCGATGGCTTCAAAAAGAGCTACAAGATCGA
CGTGTACTCGTCCCCTAAAGCCATGATTAAGTTGATCACTGAAGTTGAAA
AATTGAAAAAGCAAATGTCTGCGAATACAAATAAGCTTCCTCTGAATATT
GAGTGTTTTATGGATGATAAAGATGTTAAGGGCTATATAGATAGAACAAC
TTTTGAGGAGATTTCACAGGTTGAAATATCACGAATGGAAAAAATATTGA
CTGATTGCTTAGCCCAATCCAAATGGAAAAAAGAGGATATCTATAGTGTC
GAGATTGTTGGTGGATCAACTCGTGTTCCATTCGTTAAGACGGCCATGGA
ACGCGTATTTGGAAAAGTACCTAACACAACATTAAATGCTGATGAAGCTG
TGTCAAGAGGATGTGCCCTCCAATGTGCTATTCTTTCTCCTACATTTAAG
GTTAGAGAATTTTCTGTTTTGGACTCTCAGCCTTATCCTATTCTGCTCAA
GTGGCAGACTGGAGCTGATATTGGTGAAATGGAAGTTTTTTCTAAATTTC
AATCCATACCTTTTAGCAAGATGCTAACCTTTTGGCAGCCAGATAATTTT
AAACTAGTGGTAGAGTATGCAGGTAAGGATGTTACTATGAATCCCCATAT
TGGTGAATTTGAGATTTCTGTAACGCCTAAGCCTGATGGGTCTAACACTA
AGGTTAAAGTAAAGGCTCGAATCAATTTGAATGGTATATTCGCTATTGTA
AGTGCGACCAAATCTGAAAAACATGAAATTGAAGAGGAAGTACAAATGGA
AGTTGAGGAAGAGAAGAAACCTGCTTCAGCTAACTCTGGAGACAAAGCCA
CAAATAACACAACTTCTGAAGATGTAAACATGGATGAACCCAATGAAAAA
GCTACTACTGAAGATAAAAAAGATGAAAAGACTCCAACTTCTCCACCCAA
GATGGAAAAGCAAAAGAAAATTATCACTAAAATAATTGATTTKCCCGTCT
GTAGCCGCGTTGTTGGATCCTTAACGGATGAGGGATTAACTAATTTATCG
GGCATTGAAAGGAATTTTGTCAAGCAAGATCAAATGGAATCCGATCGTTT
AACCTATAAAAATGCTGTTGAGGAATATGTTTACGACATCCGTTCAAAAA
TCCATGGCGACCTAAGTGAATTCATTACTGATGAGGATAGAGGAAAATAT
TCTAATGAATTAGAGGACTCGGAGAATTGGTTGTATGAGGATGGTGAGGA
TGTAGAAAAGAAAGTATATGTGGAAAAATTAAATCACCTGCAAGTGGTTG
GCGAGGCATTGAAAAGAAGGAAGTATGAATTTGATCAACGACCGCATGCC
TTCAATACTTTAGGACACTGCTTGAATATGGCAACTAAAGTAATTGATGC
ATTCCGATCCGGAGATGAAAAGTATAATCATTTGGACACTGAGGCAGTGA
ACAAAGTGAATAACATGATCATTGAAAAGAATAAATGGCTGAGCTCAAGT
ATTCATACCCTAAAGGACCTTGACAAAACTAGCGATCCTTCCATTCTGGT
CTCTTATTTCTACGAAGAGAAAAAGAACTTTGAGGCATTTGCACATCCTA
TCCTTCATAAGGCTAAACCCAAGGTTGAACCTCCACCACCACCACCAACA
ACTCAACCCAATCCCGAAGATGACAAGACCAAAAATAATGCCGCTGATAA
TAACACAGAGGGAGGGGATAACAGCACCTCAGGCATGGGAGAAGGAGCTC
CACCTAAGCCTAATAAAAGAACGTGGGAGAAGAGGCTGCCCAGACTATGG
CTGTAGATTAAGTCAKCTCKCTCTCCATRCCGCCGCCGCTGGGGATACCA
AGCATTTCCTTATTAAAACATCATTTATCAATATTCTGTTTAATAATATT
ATTACACTATCATCGTCATCATCGTCGTTTATCGTAGAGTTATTATATTT
ATTGTCCCTTGCATATATATATATATATAAGCATATATATTATTCTGATA
TCGCAATTACATTTA back to top
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