EMLSAT00000000058, EMLSAT00000000058-695905 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000058
Unique NameEMLSAT00000000058-695905
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s100supercontigLSalAtl2s100:145020..145569 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000058 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000058EMLSAG00000000058-682824Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000235EMLSAE00000000235-709163Lepeophtheirus salmonisexon
EMLSAE00000000236EMLSAE00000000236-709164Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773216auto773216Lepeophtheirus salmonispolypeptide
EMLSAP00000000058EMLSAP00000000058Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000058

>EMLSAP00000000058 ID=EMLSAP00000000058|Name=EMLSAP00000000058|organism=Lepeophtheirus salmonis|type=polypeptide|length=157bp
MSLLMRLGRQTCLLRSKSLLSSSRSLGTGEDMKKLFSSPKPPLVLGIGGI
IPFYAPPLYMMHSGIFDPSLAGIQLAYGASILSFLGGVRWGHASSRGFIG
LDWLHHFRLGSTAYLDITQSSYPSWFRGLRILLXTLAIVSVFLTSICSIR
FTTGDSF
back to top

mRNA from alignment at LSalAtl2s100:145020..145569+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000058-695905 ID=EMLSAT00000000058-695905|Name=EMLSAT00000000058|organism=Lepeophtheirus salmonis|type=mRNA|length=550bp|location=Sequence derived from alignment at LSalAtl2s100:145020..145569+ (Lepeophtheirus salmonis)
ATGTCATTGTTGATGAGATTGGGGAGACAAACATGTCTCTTGCGTTCAAA
GTCTCTTCTTTCATCTTCTCGTTCTTTGGGCACTGGAGAGGACATGAAGA
AACTGTTTTCTAGTCCTAAACCTCCTCTTGTTCTTGGAATTGGCGGAATC
ATTCCTTTTTACGCTCCTCCACTCTATATGATGCATTCAGGGATATTTGA
TCCTTCTTTAGCAGGGATTCAGTTGGCTTATGGAGCATCTATACTCAGCT
TCTTGGGTGGGGTTAGATGGGGGCACGCTAGTTCAAGAGGGTTCATCGGA
TTGGATTGGCTACACCATTTCCGTGGGKCCTAGTCTTGTGGCCTGGATCT
GTCTWCTAATTCCTAGTACGTCATTTGCCAATTTGATTTTTGTTGGAGGA
TTGGGCTCCACAGCTTATCTAGATATTACACAATCCAGCTACCCATCTTG
GTTTAGAGGACTTCGAATACTCCTTNCGACACTCGCCATTGTTTCCGTTT
TTTTAACCTCAATTTGTTCCATACGATTCACAACAGGAGACTCTTTTTAG
back to top
Add to Basket