EMLSAT00000000066, EMLSAT00000000066-695913 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000066
Unique NameEMLSAT00000000066-695913
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s100supercontigLSalAtl2s100:472529..474152 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000066 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000066EMLSAG00000000066-682832Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000277EMLSAE00000000277-709205Lepeophtheirus salmonisexon
EMLSAE00000000278EMLSAE00000000278-709206Lepeophtheirus salmonisexon
EMLSAE00000000279EMLSAE00000000279-709207Lepeophtheirus salmonisexon
EMLSAE00000000280EMLSAE00000000280-709208Lepeophtheirus salmonisexon
EMLSAE00000000281EMLSAE00000000281-709209Lepeophtheirus salmonisexon
EMLSAE00000000282EMLSAE00000000282-709210Lepeophtheirus salmonisexon
EMLSAE00000000283EMLSAE00000000283-709211Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777979auto777979Lepeophtheirus salmonispolypeptide
EMLSAP00000000066EMLSAP00000000066Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000066

>EMLSAP00000000066 ID=EMLSAP00000000066|Name=EMLSAP00000000066|organism=Lepeophtheirus salmonis|type=polypeptide|length=413bp
MKEVIVIVCVFCLLALQVAGGEXLEKDIEGKSLSLFNVVRFENIVCTGDS
KNGTCYTSEECEAKGGLAQGTCASGYGVCCIITLGCGGTSSENCTYIEQS
SFTSSSSLSSNPCSYKICKLSDHVCRIRLDFTKHVLADPVSGTAVVGAVN
VIDSRYAHGQCTEDRFTFSSIGKNGAPVICGYNTGQHMILDASEQCNVLS
FTVGSSTAVSREWSIKVTQYNCGDLNAGPSGCLQYFTDDSGSFSTFNFRT
DSATVSATATHLANQEYSICIRRTANKCRVCYSPHINDPAADADTXPQAS
YGISLSSNXASKSGADTDCTTDFIEIPGAVANTVTVPTTXGTNRICGRFF
AAARDAVDSATVCSLQVPFQINVNFDENEELTAVTATMAQLSELSEAPSG
TTGFWLDYFQVAC
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mRNA from alignment at LSalAtl2s100:472529..474152-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000066-695913 ID=EMLSAT00000000066-695913|Name=EMLSAT00000000066|organism=Lepeophtheirus salmonis|type=mRNA|length=1624bp|location=Sequence derived from alignment at LSalAtl2s100:472529..474152- (Lepeophtheirus salmonis)
ATGAGTAAGAAATCCAGGGTTATGATTTTTTAACAATCACACTTCAATTA GTGGTATTAACCAATCCTTATTATTTTTCTATAGAGGAAGTTATTGTCAT TGTCTGTGTTTTCTGCCTTCTGGCTCTTCAAGTGGCTGGRGGKGAGSTAT TGGAAAAGGATATCGAAGGAAAGTCCTTATCCCTCTTCAACGTAGTCCGA TTTGAGGTATCTACTTCAATACACAGCCAAGGGTTATTAATGTACATCAA ATATTAAATTTTAGAATATTGTTTGTACGGGAGATAGCAAAAATGGTACT TGTTACACCTCTGAGGAATGTGAAGCCAAAGGAGGGTTGGCTCAAGGAAC ATGCGCCTCTGGATACGGTGTTTGCTGTATAAGTAGGTTGAGACATATTT TGTAATATAAAAAAAAAATCATATACTCGCTGATTATTTCAGTCACATTG GGATGTGGAGGAACTTCCTCTGAGAACTGCACTTATATTGAGCAGTCTTC CTTTACCTCGTCCTCTTCATTAAGTAGTAATCCTTGCTCATATAAAATTT GTAAATTATCAGATCACGTTTGCCGAATTCGCTTGGACTTTACCGTAAGA TTCTTTATGGGATGTAACTTTTAAAATAATGTTGATGGGTTTGAGTTTAT TTGCAGAAACATGTACTAGCTGATCCAGTTTCGGGAACTGCTGTTGTTGG TGCCGTAAATGTGATAGATTCTAGATATGCTCACGGACAATGTACAGAAG ATAGATTTACTTTCTCTAGTATAGGGAAAAATGGTGCACCAGTTATTTGT GGTTACAATACAGGACAGCACAGTTAGTATACATTAGTAGGAAACACTTA TAGATATGTTAACAATATTAACGTTTTATAGTGATTTTGGACGCATCTGA ACAATGCAATGTTCTATCTTTTACCGTTGGTTCATCTACAGCTGTCTCCA GAGAATGGTCAATCAAAGTAACACAATATAATTGCGGAGACTTGAATGCA GGTCCATCTGGTTGTCTTCAATACTTTACAGATGACAGTGGAAGCTTTTC TACATTTAATTTTAGAACGGACTCTGCAACGGTTTCTGCAACTGCAACTC ATTTAGCTAATCAAGAGTACAGTATTTGCATTCGACGCACTGCCAACAAG TGCCGTGTTTGTTATTCTCCTCATATCAATGAYCCAGCCGCAGATGCTGA TACATTMCCTCAAGCCTCCTATGGTATTAGTTTATCTTCAAATSCTGCCT CTAAATCCGGAGCTGATACAGACTGTACAACAGATTTTATTGAAATCCCT GGAGCTGTGGCCAATACAGTAACTGTTCCCACAACTGAKGGAACCAATAG AATATGTGGACGATTCTTTGCAGCAGCTAGAGATGCTGTAGACTCTGCAA CAGTCTGCTGTAAGTTTAAAAACCCCAAATAATTGTTTTTTTATATCAAC ATTTTAATTTTCCAAATAATAGCTCTTCAAGTCCCCTTCCAAATTAATGT CAACTTCGATGAAAATGAAGAATTGACTGCTGTGACAGCAACAATGGCAC AATTAAGTGAACTGAGTGAAGCCCCTTCTGGTACCACTGGTTTTTGGTTA GATTATTTTCAAGTTGCTTGTTAG
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