EMLSAT00000000072, EMLSAT00000000072-695919 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000072
Unique NameEMLSAT00000000072-695919
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s100supercontigLSalAtl2s100:608142..609002 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000072 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000072EMLSAG00000000072-682838Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000315EMLSAE00000000315-709243Lepeophtheirus salmonisexon
EMLSAE00000000316EMLSAE00000000316-709244Lepeophtheirus salmonisexon
EMLSAE00000000317EMLSAE00000000317-709245Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778876auto778876Lepeophtheirus salmonispolypeptide
EMLSAP00000000072EMLSAP00000000072Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000072

>EMLSAP00000000072 ID=EMLSAP00000000072|Name=EMLSAP00000000072|organism=Lepeophtheirus salmonis|type=polypeptide|length=131bp
MVNMVSCKDFYIPERFLEIKEEIESLEIRSDDLFLISYPKAGSTWSQEMG
WQLNGGTNFVKCKRNLAERIPFLELESLVLRGPESPIKSVEAVKNQSSPR
IIKSHLLTPFLPKHFFNKAKKKFEIDLESDN
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mRNA from alignment at LSalAtl2s100:608142..609002+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000072-695919 ID=EMLSAT00000000072-695919|Name=EMLSAT00000000072|organism=Lepeophtheirus salmonis|type=mRNA|length=861bp|location=Sequence derived from alignment at LSalAtl2s100:608142..609002+ (Lepeophtheirus salmonis)
ATGGTGAATATGGTGTCTTGCAAAGACTTTTACATACCTGAGAGATTTCT
AGAAATTAAGGAGGAGATTGAAAGCTTAGAAATAAGGTCGGATGATTTGT
TTCTCATCAGTTATCCAAAGGCTGGATCTACTTGGAGTCAAGTAAGTTGT
CTGAATTACTTCTAATGAATGAGTATAAATCAAATACTTTCATTATTAGG
AAATGGGTTGGCAATTAAACGGAGGGACTAATTTTGTGAAATGTAAACGA
AACCTCGCTGAAAGAATTCCATTTCTTGAATTAGAGTCTCTTGTTTTACG
TGGTCCTGAGTCCCCAATTAAAAGTGTAGAAGCTGTTAAAAATCAATCCA
GTCCACGTATCATTAAATCCCATCTACTCACACCATTCTTACCCAAACAT
TTTTTTAATAAGGCAAAAGTGATTTATGTTATGCAAACACTAAGGATGTT
TGTGTTTCATTTTATCATTATGAAAAGCTTTTAAAAAATCATCAGTATAC
TGGTTCCTTTGATGAATATGCAGAATTATTTATTCAAGGCAAGGTCGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAATGA
ACATCCTTCATTCAATCAATTTCAGAAGAAATTTGAGATCGATTTAGAAT
CAGATAATTGA
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