EMLSAT00000000075, EMLSAT00000000075-695922 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000075
Unique NameEMLSAT00000000075-695922
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s100supercontigLSalAtl2s100:69178..72859 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000075 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000075EMLSAG00000000075-682841Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000329EMLSAE00000000329-709257Lepeophtheirus salmonisexon
EMLSAE00000000330EMLSAE00000000330-709258Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771294auto771294Lepeophtheirus salmonispolypeptide
EMLSAP00000000075EMLSAP00000000075Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000075

>EMLSAP00000000075 ID=EMLSAP00000000075|Name=EMLSAP00000000075|organism=Lepeophtheirus salmonis|type=polypeptide|length=165bp
MSIPDKSWQPPGATIKTTMGEFEVELYWKHAPNTCRNFAELVRRGYYNGN
KFHRIIRDFMIQGGDPTGTGRGGASIYGKTFEDEIHDDLKHTGAGVLSMA
NSGPDTNGSQFFITLAPTQWLDGKHTIFGRVSRGMLTIKRLGCVETXSGX
KPVDDLRIVSVQINN
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mRNA from alignment at LSalAtl2s100:69178..72859+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000075-695922 ID=EMLSAT00000000075-695922|Name=EMLSAT00000000075|organism=Lepeophtheirus salmonis|type=mRNA|length=3682bp|location=Sequence derived from alignment at LSalAtl2s100:69178..72859+ (Lepeophtheirus salmonis)
TCTCAACCTTTTCACCTTCAAAACGAGAAAAAGAAGGCTCAAAATATAGA
AAAAGAAATATATGTGTTTCTTTCTGTATGGCTCAAAATCATTTAACTAT
ATAACCTATAAATTAATTATCTAGCTTCCGATGCTATGGCTATGAGCTAT
AGCCAGGCTATGACTTCATAGAATAAAGGGGTAAGCCTATTCATTGATTT
GTTAAAAAAAACGCAGCAAAACCTCGAAGACTGTCGGTTATGACGTCATA
TCATCGTTTGAAAAATATAAATATTATTATTTTGTATTTACTAATAATAA
TTGTCTGATATTGAATTTGAGACACCCTTCTTCATATCGAGGCTCTCGAC
CGGCAACGTAGACTTAGAGAAAATGTCAATCCCCGATAAATCATGGCAAC
CCCCCGGAGCAACAATAAAGACGACAATGGGAGAATTCGAAGTGGAGCTT
TACTGGAAGCACGCTCCAAACACTTGTCGGAATTTTGCCGAACTTGTTCG
CCGCGGATACTATAATGGGTCCAGTAGATGAGCTTATAACCTGATTCAAA
GGCCACATTTTCATGGATTTGTTCTTTTCAATCAATATTTTGTTCCATTT
TTGAATTTCCATGCAATGTTTAGCTTTTGAACGAATTTTCATTTTTTTTC
CATTGATTTCATGATTTGATTTGAGAATTGAATTTGTGTTTATTTTTTTT
AGAAACAAATTTCATCGAATAATTCGAGACTTCATGATTCAAGGTGGTGA
TCCCACAGGTACGGGACGAGGTGGAGCATCTATTTACGGTAAAACATTTG
AAGATGAAATTCATGATGATCTTAAACACACTGGAGCTGGAGTTCTTAGT
ATGGCTAATTCGGGTCCAGATACGAATGGATCTCAATTTTTTATAACTCT
TGCGCCAACTCAGTGGCTTGATGGAAAGCATACTATTTTTGGACGTGTCT
CTCGTGGAATGCTCACGATTAAAAGACTAGGTTGTGTGGAAACAGMCTCT
GGGGAMAAGCCTGTTGATGATTTACGCATTGTATCCGTTCAAATAAATAA
TTAATAAGTATGCTATAATTGTCTTTTTATTTTTTTATATAATATAAGTT
CATCACGAATTATGTTTAAGAGTTTTTTTACTTCAGTATATTCATATAAT
ATGTACCTATTTTATGTACTACGGAAATGTTAGATCATATAATTATAGCC
TCGTACAGCTTAGACAACTGATTTTTACAGCCATGGTACTTGTGGCCGTC
CGTAAATTCATTTTTTGTATAACATAAAATCATACTCGTTTTTACAAAAA
TCTGTTATGAACAATAACCTTGGCAATATACATAAGGCAACAACCTATGC
TGTTCGAAACTATAGACTGAACAACCTTGATTTATAACAGAATCCTTTAT
TGTACTCTATTTATGTGTGAATACATAGATTATTTAAAAAATTACTTGGA
TACCTCAAAGTTATAACAAGACTATTAACAAAAATTTGTATAAAATAAGT
TATGAAAGAAACCCCAAGAGCATATCATAAAGTAAAAAAACAATTAATGA
ACGCCTTTAATAGAATTCTGATGCTCAAGACAGAAAAAAAAGTAGCTTTT
GTTCAGTGAAATGTCCCAAGGAGATCACATCAAAAATTGACTCCATTCAT
TCTGCAATTTTAGAGTCTACACGAACATTTGTAAATGACCTTTTAAGTAG
GTAGAAGTTAATTTATATAAAATTATTCAATAAAAATGTGCGGAAGGAGC
TCGATTAAATACAAAAAAAGAATAGACACGTTTTCTTTAGTTATTATTAC
AAAATGGATCACCACATAAATCTTTGTATGCTGTTCGGCTCGTGAGGCCA
TGCGAATGGTTTGTACATGTATGCATACATCGTTCCGAGATTAATTAGCA
AGTATAATAACATTTCGATCATGAGATTAGAATATTTCTCAGGTCGAATG
TGTAGACGGTATAAAAGATATGGAATAATGAAATATCGGAATTCAAGAAG
GAGCTGAGGGCAGAGATTGAATGATAAAAATATAGGGAAGGTGATGCGGA
AGATAATACCAGTGGCTCSCAGTGTTCTTGATAAGCAATATGCTCCATAA
ATATAAAATGGAATTCCTAAATACGGACTCCAATTCGAGCGATGAATGAT
TTTCCTCCAAATATAGAATGTGTAGTGTCGATTATCTGCAAGTAAATAGG
GAKGAGCCAAGCTTCCATATTCTCGAATGATTCCATAAAAGAATAGAGAC
AGGGTTGCAAGCCAAAAAGGTTTCTTTTTTACAGAGTGCTTAAAGAAGCT
CTCCATTTTGGAAATGCAATGTGGAAATGACATCACTAAAGAGAATCCGA
AGAAATAAAACATTTGGGTTGGATGAAATMCTGCCGTATGTGCCAGACGA
TCTCCAACCACTATCCCTTTATTAATGATTATAAATGCAATAAAAAAGAG
TCCAACAATCAAGTATCCCCCAGCTGTGAGAAGACACTTGATCACAACGT
CCTTTAAAAGTGTTGAAGGATAGAACAGGAGGAGAGCCAAAATACCTTCA
ATGAGCTCTTTGAGCTGTCCTGTAAACGTAAGACTAAACTTTACATTCTT
TTTATCCATGTGCATCAAAGAGTGAATAGCATGGATAAGATGTGGACCAC
ATGCCTGGACGGCAACGAATGCTACCCAAATGATGTTGGTTTGACGAAAT
AAAACGGCAAGAAAACCTGTAGTAGAGGAATTAAGAAAAACAATTCACAT
TGAAGTAAGATAATGATMCCCTTACCAATAAATGCAGCAAACCAGTCTCT
CTTCTCCAAATGAAGACAGTACATGAGGAGAACCATGAATGTGGATCCCA
CATCCGTGTAATAAAAGAAGCTGAAGAAGTATAACAGAGGAAAAAGAGCT
ATATTCAGAGAAGAGAGGAGACATTTCTTATCGTCTCCAAAAATCTGTTA
GGAAGAAGAGAGTGAATTAATCACATATCTATTTTTTATATTCGTGGGAG
ACTCACTCCATGCCTCGCTCCGTGGATTTGAATTGTGATCCTCTGAATAA
TAAGAAAGTTGACGACAGAAAGTGCCAAGGAAACACATCTCAGATGAAAT
GTATCACAAAGTGTCATAATTGGACCAATAAACTTTGAAATTGGATTGAG
GATCCCAATGGTGATTAAATAGAGTCCGGGTAAAGTTGTTATTTTCGGGT
CCCACTGCAATAATAATAATATTTCATGAGGATTAGTAATAATAATTAAT
ATAGTTAATAATAATGAAGGGAAATATTATTACAGAAATGAAATCCCCGG
CGCAGTATTTTTGAACTTGAGGGATGTGGAATATTTCGTCCATGTAGGGC
TCGGACTCTGCTGGAGACATCCATCCTTTGAGGATTCCAAAACTGATGGA
CGCGAATAAGCAAGTCACGACTATGCGTTTGTCATCTGAAGTGATCATCC
TTCTAATGCTTCGTTAGATCGATCATAATATTGCCTCAATTTGTGACATA
TTAATTATAAGTATTATTCGTCTCAGAATGAGAATGCGTTGAGMAAATAG
TGACGTACGCACTATTATAGACTATTCTAGCCAATAACAACGACACAAGA
ACGATTAGAAGTCGTACTTAAAGGACTTGATATAACAAAAAATTAGTGAT
GTGTTCATCATTATTGTCTATTAAGAAGAAAC
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