EMLSAT00000000110, EMLSAT00000000110-695957 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000110
Unique NameEMLSAT00000000110-695957
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s101supercontigLSalAtl2s101:232692..234160 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000110 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000110EMLSAG00000000110-682876Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000462EMLSAE00000000462-709390Lepeophtheirus salmonisexon
EMLSAE00000000463EMLSAE00000000463-709391Lepeophtheirus salmonisexon
EMLSAE00000000464EMLSAE00000000464-709392Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774987auto774987Lepeophtheirus salmonispolypeptide
EMLSAP00000000110EMLSAP00000000110Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000110

>EMLSAP00000000110 ID=EMLSAP00000000110|Name=EMLSAP00000000110|organism=Lepeophtheirus salmonis|type=polypeptide|length=386bp
KWKFSSVLLFVSSQKGSNSITQIVQSSTWILKAFRNSLLFNMPKPDEETE
ALKKELGDLVTKCREEQKKFADTLDFGAASNIPKVKPGCKKSLKGHINKV
TCIHFSGDSRHLVSGSLDGKLIVWDCWTSNKTMVIPLRSAWVMTSSFAAS
GNLVGCGGMDNMLTIYDINNRDANGLAKILYEFMGYEGFLSSCKFIDDNR
VVTGSGDMKIMEWDLTTGKKTQDIDGHNGDIAGLSLKPGESDVFVTSSVD
RTCRIWDIRTSSCQQIFWGHDADVNSVYFHPCGNHFVTCSEDKTARLWDI
RSDQEIAVYXPPTPNSNFTCVATTVSGRILLCSSDDASIHMWDLVSKAHL
GNLCGHDNRITXLSXAPSGLGIASSSWDTSVKCWAL
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mRNA from alignment at LSalAtl2s101:232692..234160+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000110-695957 ID=EMLSAT00000000110-695957|Name=EMLSAT00000000110|organism=Lepeophtheirus salmonis|type=mRNA|length=1469bp|location=Sequence derived from alignment at LSalAtl2s101:232692..234160+ (Lepeophtheirus salmonis)
AAATGGAAATTTAGTTCTGTACTCCTCTTTGTTAGTTCACAAAAGGGATC
TAACTCTATTACACAGATAGTCCAGTCCAGTACATGGATTCTAAAAGCCT
TTCGGAATAGCTTACTCTTCAACATGCCAAAACCAGACGAGGAAACTGAA
GCCCTGAAAAAGGAGTTGGGTGATTTAGTAACAAAATGTCGAGAGGAACA
GAAGAAATTTGCAGATACTTTAGATTTTGGGGCTGCATCTAATATTCCGA
AGGTCAAACCGGGATGTAAGAAATCCCTCAAGGGTCATATCAACAAAGTG
ACTTGTATTCATTTCTCCGGAGATTCTCGGCATTTAGTAAGTGGATCTCT
GGATGGAAAACTCATTGTTTGGGATTGTTGGACGAGTAATAAGACCATGG
TGAGTTATGCTTTTATGCATATGTAGATACAACGCCTTTGACCTCTCTTC
TTCTTCTAGGTCATTCCATTGAGATCCGCTTGGGTAATGACATCTAGTTT
TGCAGCCTCTGGTAATTTGGTCGGTTGCGGAGGAATGGACAATATGTTGA
CAATCTATGATATTAACAATAGAGATGCTAATGGATTAGCAAAAATTTTG
TACGAATTTATGGGATACGAAGGTTTTTTGTCCTCTTGCAAGTTTATTGA
TGACAATCGTGTCGTTACAGGTAATCCTCCTGCGTCATAATCGCAACTTA
TTTACATTTTTTGTAATATCCAACATAGGCTCTGGAGACATGAAAATAAT
GGAATGGGACTTGACCACTGGAAAAAAGACACAAGACATTGATGGCCATA
ATGGAGACATTGCAGGGCTTTCTCTTAAGCCCGGGGAAAGCGACGTCTTT
GTCACGAGCTCTGTGGATAGAACTTGTCGTATCTGGGATATTCGAACATC
TTCTTGCCAGCAAATTTTCTGGGGCCATGATGCGGATGTCAACTCTGTCT
ACTTTCATCCTTGTGGTAATCATTTTGTAACTTGCTCTGAGGATAAAACT
GCCAGACTTTGGGACATTCGTTCAGATCAGGAAATTGCTGTCTATAAKCC
TCCCACTCCCAACTCCAATTTCACTTGTGTTGCCACAACAGTCTCTGGAA
GAATCTTACTTTGTTCTTCAGACGACGCATCCATCCACATGTGGGATCTT
GTTTCAAAAGCTCATCTAGGGAATTTGTGTGGTCATGACAATCGTATTAC
TCAWTTATCAGMGGCSCCATCCGGTCTTGGCATCGCCTCTTCTTCTTGGG
ATACGAGTGTTAAATGTTGGGCTCTCTAATAAGTATATCATAAATAAATA
TAATTTATATTCTTTGTAAGGAAATTTGTATTTTTTTTCTCTTTCAACAC
CTAATTTGCCAATGTCTGTCTTTGAACCTAAATAAAATTTCACATCAAAA
ATATTCATCTAATTAATATTAATCCATCGACAATACTAATCTATCTTGAT
GAAAGAAAATCCTGACTCA
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