EMLSAT00000000117, EMLSAT00000000117-695964 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000117
Unique NameEMLSAT00000000117-695964
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s101supercontigLSalAtl2s101:475925..477181 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000117 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000117EMLSAG00000000117-682883Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000494EMLSAE00000000494-709422Lepeophtheirus salmonisexon
EMLSAE00000000495EMLSAE00000000495-709423Lepeophtheirus salmonisexon
EMLSAE00000000496EMLSAE00000000496-709424Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778002auto778002Lepeophtheirus salmonispolypeptide
EMLSAP00000000117EMLSAP00000000117Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000117

>EMLSAP00000000117 ID=EMLSAP00000000117|Name=EMLSAP00000000117|organism=Lepeophtheirus salmonis|type=polypeptide|length=264bp
MNKQVDSNTYICNCHPMSILFYVPRWLWKNWEAGKITALMMDLDIGVVSE
VEKKQKKKLLLDYLYDNLKNHNWWAYRYFFCELLACLNIIGQMFLMDRFF
EGAFLTFGLEVMAFAERDQEDRLDPMIYVFPRMTKCTFHKFGASGDVEKH
DALCILPLNIVNEKIYIFLWFWFLILGALSALVVLYRLVIIFSPRIRAYL
LYIRFRLIKREVINVIVKKSKMGDWFLFYMLGQNVDNIIFKEVMHELARR
LGHQGKDFSANSEP
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mRNA from alignment at LSalAtl2s101:475925..477181+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000117-695964 ID=EMLSAT00000000117-695964|Name=EMLSAT00000000117|organism=Lepeophtheirus salmonis|type=mRNA|length=1257bp|location=Sequence derived from alignment at LSalAtl2s101:475925..477181+ (Lepeophtheirus salmonis)
ATGAATAAGCAGGTGGATAGTAATACATACATTTGTAATTGTCATCCAAT
GGTAGATTATTTATGTTTAAGAAGTATATAATCTGTGTGGGGGGGGGGGG
GGTTTGGGTTTTATTTAGTCTGTCTAAACCTCTTTGTTTGAGAAGCAAAT
TATAATATTCTACTTTTTTATTTATTTCAGTCCATTCTATTCTATGTTCC
TCGATGGTTGTGGAAAAATTGGGAGGCGGGTAAGATAACCGCCCTCATGA
TGGATCTAGACATCGGAGTTGTATCGGAGGTTGAAAAAAAACAAAAGAAG
AAACTCCTCCTAGATTATCTCTACGATAATCTCAAGAACCACAATTGGTG
GGCTTATCGATACTTTTTCTGCGAGCTTTTAGCATGTCTTAATATTATAG
GTAAGGGCTCTCACCCTCTAACTTACCCGGGTGTGCACGCTCTCCGATTG
CTTTTTAATTTACATCCATTCTTTTCAGGTCAAATGTTTTTGATGGATAG
ATTCTTTGAAGGTGCCTTTTTAACGTTCGGCTTGGAAGTGATGGCTTTCG
CCGAAAGGGATCAAGAGGATCGCTTAGATCCCATGATATATGTCTTTCCG
CGAATGACCAAATGTACATTTCACAAATTTGGAGCATCCGGAGACGTGGA
AAAGCACGATGCTCTCTGTATACTCCCGCTCAATATAGTGAATGAAAAGA
TTTACATTTTCCTTTGGTTCTGGTTTCTGATATTAGGAGCCCTATCCGCT
CTTGTTGTCCTGTATCGTCTTGTCATCATTTTCTCTCCMCGGATCCGAGC
CTATCTTCTTTACATCCGATTCCGACTCATTAAACGAGAGGTCATTAATG
TGATTGTGAAAAAGAGCAAAATGGGAGATTGGTTTCTGTTTTACATGCTA
GGACAAAATGTGGACAATATTATCTTCAAAGAAGTGATGCATGAGCTGGC
CAGGCGGTTGGGGCATCAAGGGAAAGACTTTAGTGCCAATAGTGAACCAT
AAATCCAATTTACTACGTCTTCATACTCTTTGTTTTTTATTATTATTTCT
ATATTATCATCCAGATACTTACATACATCTATCAAGGAACATTCTCCAAC
AAACTCACTCCTATTTTCTTCTCCTATTTTATTATTATTAATTAATTATT
ATTTAGGATTTTTCAATACTACATACATACATATTTACATATTTTCTAGG
TAGAGAAACATATTTTATTATTAAATAATTAATCTTATAATGTAATTATG
TACTAAC
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