EMLSAT00000000129, EMLSAT00000000129-695976 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000129
Unique NameEMLSAT00000000129-695976
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1020supercontigLSalAtl2s1020:59122..59626 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000129 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000129EMLSAG00000000129-682895Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000561EMLSAE00000000561-709489Lepeophtheirus salmonisexon
EMLSAE00000000562EMLSAE00000000562-709490Lepeophtheirus salmonisexon
EMLSAE00000000563EMLSAE00000000563-709491Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770946auto770946Lepeophtheirus salmonispolypeptide
EMLSAP00000000129EMLSAP00000000129Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000129

>EMLSAP00000000129 ID=EMLSAP00000000129|Name=EMLSAP00000000129|organism=Lepeophtheirus salmonis|type=polypeptide|length=63bp
MGKRDPMFNETLNFEVPPSHLDSSTFVILINQKVNSIEMRELDSIAEDTF
ENIHEEERGSKDT
back to top

mRNA from alignment at LSalAtl2s1020:59122..59626-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000129-695976 ID=EMLSAT00000000129-695976|Name=EMLSAT00000000129|organism=Lepeophtheirus salmonis|type=mRNA|length=505bp|location=Sequence derived from alignment at LSalAtl2s1020:59122..59626- (Lepeophtheirus salmonis)
ATGGGAAAACGAGATCCGATGTTTAATGAGACACTTAACTTTGAGGTTCC
ACCTTCACATCTAGATTCCTCGACTTTTGTTATCCTTATAAACCAAAAGG
TCAACTCCATCGAAATGCGAGTAAGCATTGTGTCCTGGAAATTTGCATTG
ACATCAAATATATTTTTGTAATCATATAGGAATTGGACTCTATTGCAGAG
GATACATTTGAAAACATTCACGAAGAGGAGCGGGGATCAAAGGATGTTTG
TCTTGGCCGGATTTGTATTGGGCGTCGTGTAAATGGATTAAAGGAGCGAG
CTCACTGGGTAAATGTAGTACAAAATCCAAGAAAGGTTTTTTCTACATGG
CAAACATTGTATTAAACCAACATGCCCTTTAAAATTAGTCTAGGTTTTTT
TTTTTTTTTGTGTCATTTCCTATCAGAAAAGATGCAAATTCAGATATTAC
TCTGTATCAAATTTGTAATACAGTTAACATATATACAATATATGTTTAGA
CCTAA
back to top
Add to Basket