EMLSAT00000000138, EMLSAT00000000138-695985 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000138
Unique NameEMLSAT00000000138-695985
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1021supercontigLSalAtl2s1021:425..1572 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000138 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000138EMLSAG00000000138-682904Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000594EMLSAE00000000594-709522Lepeophtheirus salmonisexon
EMLSAE00000000595EMLSAE00000000595-709523Lepeophtheirus salmonisexon
EMLSAE00000000596EMLSAE00000000596-709524Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767971auto767971Lepeophtheirus salmonispolypeptide
EMLSAP00000000138EMLSAP00000000138Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000138

>EMLSAP00000000138 ID=EMLSAP00000000138|Name=EMLSAP00000000138|organism=Lepeophtheirus salmonis|type=polypeptide|length=165bp
MINLEKDVDNFDMTYILDCVKENNLRNDLCNYRLGVSLFEEYDPYDILIG
EKTWIDLKKRKNIEEEYMEIDNFDKALLTPSANSKNRKNCNTLWLSQTDV
LKSKEHEAFSKTCMLQSLNYSSQTKFLATWNLRQKDSSKEPEKKERSSDS
YSLSKCNNSWYTNDP
back to top

mRNA from alignment at LSalAtl2s1021:425..1572-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000138-695985 ID=EMLSAT00000000138-695985|Name=EMLSAT00000000138|organism=Lepeophtheirus salmonis|type=mRNA|length=1148bp|location=Sequence derived from alignment at LSalAtl2s1021:425..1572- (Lepeophtheirus salmonis)
ATGATTAACCTTGAAAAAGACGTGGATAATTTTGACATGACTTACATCCT GGACTGTGTCAAGGGTAAGTTCCGAACTCCACTTGCATTTTTGTCCTCAA TCCTGGAGTTATTATACTTAATTATTAATGAATACATATCTGATATCTAT CATTTTTTACAGAGAACAATCTACGCAATGATCTCTGCAATTATCGACTT GGAGTCTCTCTTTTCGAGGAATACGACCCTTACGACATTCTAATTGGCGA AAAGACTTGGATTGATCTTAAGAAACGAAAAAATATCGAAGAGGAATACA TGGAAATAGATAACTTTGACAAAGCTCTCCTCACTCCCTCTGCTAATTCC AAAAATCGTAAAAGTAATTCTTATGATGGACAAGTTCRTATACTCAAATA CATCATTACTCATGGAAAATACAATTCACTTAAAGATATCAACACTTTGA GAAGAATGAAAGTTGGTGGAGTATGTTCAGGATTGAGAACAGCCATTTCT TTAAAAGAGCATTTTAGAAAACAAATCCTCCCTCACATCAATATTAAAAC ATACACCCAATTTAGTGAAGAGGATTTGAATAAAATTCTTAGAGGTTGGA AAGGCTCTAAGACTTCGTTTAATGTTGAGGTTTTAGAAAGAAGTTCTAGG CTTAAACAAAACGTTCCTTGTTCTGATGATGCTRCAATGCATAAACAGGC CAATGTGAAAATCGAAAACTCTGTTGGATCTCTTCAAAAAAGTTCTCGAA AGCTGATTAACAAAGATAAAACTCACTTTGATGAATCATTTGGAATACTC AACAAAAAAGAAGAAGTAACTGCTATCCCATCATATAAGCGGATAAAGAT ATGTAATTTGAATAAACTTGAAGCTTCATCCACTCCTATACAGAAATATT TTGTCAAAGAATCTCAAGATTGCAATACTCTATGGTTATCCCAAACGGAT GTTTTGAAATCAAAGGAGCACGAGGCCTTTAGTAAAACTTGTATGTTGCA GAGTCTTAATTATTCGTCTCAAACAAAGTTTTTAGCTACATGGAACCTCA GACAAAAAGATAGTAGTAAAGAACCCGAAAAAAAAGAGCGTTCTTCAGAC AGTTATTCTTTATCTAAATGTAATAATTCCTGGTATACGAATGATCCA
back to top
Add to Basket