EMLSAT00000000140, EMLSAT00000000140-695987 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000140
Unique Name	EMLSAT00000000140-695987
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1021	supercontig	LSalAtl2s1021:57445..61816 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000140 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000140	EMLSAG00000000140-682906	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000000602	EMLSAE00000000602-709530	Lepeophtheirus salmonis	exon
EMLSAE00000000603	EMLSAE00000000603-709531	Lepeophtheirus salmonis	exon
EMLSAE00000000604	EMLSAE00000000604-709532	Lepeophtheirus salmonis	exon
EMLSAE00000000605	EMLSAE00000000605-709533	Lepeophtheirus salmonis	exon
EMLSAE00000000606	EMLSAE00000000606-709534	Lepeophtheirus salmonis	exon
EMLSAE00000000607	EMLSAE00000000607-709535	Lepeophtheirus salmonis	exon
EMLSAE00000000608	EMLSAE00000000608-709536	Lepeophtheirus salmonis	exon
EMLSAE00000000609	EMLSAE00000000609-709537	Lepeophtheirus salmonis	exon
EMLSAE00000000610	EMLSAE00000000610-709538	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto770910	auto770910	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000140	EMLSAP00000000140	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1021:57445..61816+

protein sequence of EMLSAP00000000140

>EMLSAP00000000140 ID=EMLSAP00000000140|Name=EMLSAP00000000140|organism=Lepeophtheirus salmonis|type=polypeptide|length=701bp
MSLSTSGMETFHRTLLLLRKDPLSESNKLNLEKGLKTINPSSFVSTQGKT
ILCNLEWILQTHSSSTSLVKAILSFLENICILHEELRIFLRDSSNLFGLC
LKFLSEIHSLRALRLIEHLVLGWRLGDSDVARLERLVQYLMKFIVDCDNK
EMRASSVFIIVCLCHWNTCAADFILSQKEIEYLFNSKQTDLKLQALIKML
NYFMSQSRITDESLSEDPNEMNKIESYIVILIDAFCSAYVCDDLLMMRLL
TEILESITKERKTKRTTESLDTLSLAKGIILITDFGDESNQMSNEYILGF
LRHLLKISSDNKGAFDIISLLASQRLKSNLRSPILETMLCIQDGISLLGD
DAEIIAKSNEGYMMDYIISQSLQTLLSNKINHMDRLSVLETLRSISKVDF
NLSEMIVSRLQCPIQFINSQIELIFEKKNSLTCVAPVLVELILFCKEFND
IKWKKAIEDVFLKNERVVCSLITCLGSLCHPNILKCINETLIPLLKETSC
VSREEKYEDCIPELTQLEMYRPLTSFENVSSADLFEFGNFQKYSADRKAE
KIQQYLNAAEETIAKKKKYVVQLESKVKWLYHVMSLMVLRDDQIKFVLPR
KRNELQSVQSNNLSLKNEMKSALHEKMRENGELEENYEKLSLKALKYKED
IDALQKTIQEHFQRQLDKKDKQLAEYSEELNSMKEIQNQIFNLSKKQAEK
S

mRNA from alignment at LSalAtl2s1021:57445..61816+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000140-695987 ID=EMLSAT00000000140-695987|Name=EMLSAT00000000140|organism=Lepeophtheirus salmonis|type=mRNA|length=4372bp|location=Sequence derived from alignment at LSalAtl2s1021:57445..61816+ (Lepeophtheirus salmonis)
GTTCTAACTTCTCAGTAAATATTATATTCCCGCTTTTATAATTGTGTATC
ATCACTAAGTAGGTAAGACTGGGTCAGTTTTATCAAATACTATTTTTTTA
AATTGCTATTTGTGTTTCGATGATTCACACTGTCTGAGTCTGAAATTATC
TAGCTCTTAGTTGCTCTCTTATTAGCCAACCAATACATCATAAAAAAAAA
CCACTGTGTAGCTTAATACTTTATTTGAATTACATTTTTATATTCTTCTT
GCTTTCTCCAGGATAGAGTTGATTGTTGCAGGTAAATTTCTGTAGAGTTG
TAGATTTATAAAATATTTTAACTAAAACTATTTGTAAATTAGACATAGTG
AAATGATATCATTTTGTTCATTTTGTCGTAAATCATAATCATAACGAGTA
GAAGTTATTTAGTTAATACTGATTCTTCTCCATTGTAGATTACTCATGCA
GAATTAGTACATGAAATGGATCTGTTATAAAGAAATAGACTATTAATCTC
TACTATATTCCCAATATTAAGTTTGTGACCGATGATGGCCATAAATTCTT
GTGCACGTCTCCCCTATATGTACAACTGGAACTGTAGATTCCTTTTCATT
TGAATTTTAATTAACCAAATAACAAAAATTAAAATCATACAAAAGTCGAT
ATTAAGCGATGTCACTTAGTACTTCAGGTATGGAAACGTTTCATCGAACC
CTTCTTCTTCTCAGAAAAGATCCACTATCCGAAAGTAACAAATTGAACTT
GGAAAAAGGATTAAAAGTTTGTATTTATAGAATCAAATAATTAATACTCA
ATCAATTATTAATATAAATATCCAATGAATACCTTATTTTGAAGTATCAT
TTTAAAATTAATATTATTAATTTGTCAAAATGTGGAAAAAATTTATTTTT
TAATTTTTTTTCAACTCCGATCGGATGACTTGATTATGAAATGAACATCT
ATAATTTAATTATCAAGATTCTAATGTATATGATATGTTAATTATTATTA
AATTGAATTTCAGACAATAAATCCTTCTTCCTTCGTATCGACTCAAGGAA
AAACCATTTTATGCAATTTGGAATGGATTCTACAGACCCATTCCTCTTCT
ACGTCTCTTGTAAAGGCCATTCTAAGCTTTTTAGAAAATATTTGTATTCT
CCACGAGGAATTACGGATATTCCTTAGAGATTCGTCAAATCTTTTTGGAC
TTTGTTTAAAATTCCTCTCGGAAATACATTCTTTACGAGCTTTACGTTTG
ATTGAGCATCTTGTATTGGGTTGGAGATTAGGTGACTCGGATGTGGCCCG
ACTGGAAAGACTAGTCCAATATCTTATGAAGTATGACCATTTAAGAAAGG
GTTGTGAATATATTTTCATTACGACCTTACTTTCAGGTTTATAGTTGACT
GTGATAATAAAGAGATGAGAGCTTCAAGTGTTTTTATCATAGTATGCCTT
TGTCATTGGAATACGTGTGCTGCAGATTTTATTCTATCACAAAAGGAAAT
AGAATATCTTTTCAACTCTAAACAAACGGATCTTAAACTACAAGTATTAC
TATAAAACACTATGATCTACTTAATCTTTCAATACAAATTTTCATAGGCT
TTAATAAAAATGCTGAATTATTTCATGAGTCAATCTAGAATCACGGATGA
ATCCCTTTCAGAGGATCCAAATGAGATGAATAAAATTGAGAGTTATATTG
TTATATTAATTGATGCATTTTGTTCAGCATACGTCTGCGATGATTTGCTA
ATGATGAGACTACTTACTGAGATTTTAGAAAGTATAACGAAGGAAAGAAA
GACGAAAAGGACTACTGAAAGTTTGGATACACTTAGTCTTGCTAAAGGAA
TTATTCTTATTACAGATTTTGGAGATGGTTAGTTCTAAATACATATCTAC
ACATACGTATTTATTTTTACTTATTGTAACTTTATTCATTTTAGAATCCA
ATCAAATGTCCAATGAATATATATTAGGGTTTCTTCGTCATCTATTAAAG
ATCTCATCGGATAATAAAGGAGCTTTTGATATTATATCACTATTAGCTTC
CCAACGCTTAAAATCAAACTTGAGAAGTCCCATATTAGAAACAATGCTAT
GTATTCAAGATGGCATATCTCTTTTAGGAGATGATGCTGAAATTATTGCT
AAAAGTAATGAAGGCTATATGATGGATTATATTATATCACAGTCATTACA
AACACTTTTATCTAATAAGATTAATCATATGGATCGTTTATCAGTCTTAG
AAACGCTTCGAAGCATATCAAAGGTTGATTTCAATTTGAGTGAAATGATA
GTGTCAAGGCTTCAATGCCCTATTCAGTTCATTAATTCGCAAATAGAATT
AATATTTGAGAAAAAAAACAGTCTAACATGTGTAGCACCTGTACTAGTGG
AATTAATTTTATTTTGTAAAGAATTTAATGATATCAAATGGAAGAAAGCG
ATTGAAGATGTCTTTTTGAAAAATGAAAGGGTCGTTTGCAGTTTAATTAC
TTGTTTGGGAAGCTTGTGCCATCCAAATATTTTAAAATGCATCAATGAAA
CACTTATTCCACTTTTAAAAGAGACGTCATGCGTTTCTAGAGAAGAAAAA
TATGAAGACTGTATCCCTGAACTCACCCAATTAGAAATGTATCGACCTCT
CACTAGTGTCGTTGAAGATAAAATTGATTCTTCGATTCACTTTATACGAA
GAACTATTGAAAATAAAATGTAATTTTTGTACCTTGTATTTATATTAAAT
ATTTAATGTTATGTACTTATTCTCTTTCAGTTTGAAAATGTATCATCCGC
TGACTTATTCGAATTTGGAAACTTTCAAAAATATAGCGCAGATCGAAAGG
CAGAAAAAATCCAGCAATATCTTAACGCAGCTGAAGAAACTATTGCAAAG
AAGAAGAAATATGTTGTTCAATTAGAATCTAAAGTCAAGTGGCTTTATCA
TGTAATGAGTCTAATGGTTCTGCGTGACGATCAGATAAAATTCGTATTGC
CCAGAAAGCGGAATGAGCTACAATCTGTTCAATCTAATAATCTCAGTCTT
AAAAATGAAATGAAAAGTGTATGTAATGTTATATAAGTAGCTAAATATCT
ATGAAATACGATTTTTTCCATATCAACCAGGCATTACATGAAAAAATGAG
AGAGAATGGGGAACTTGAAGAAAACTATGAAAAATTGAGTTTAAAGGCCC
TCAAGTATAAAGAAGACATAGATGCACTTCAAAAGACAATACAAGAACAT
TTTCAAGTACAGGAGGAGCTTCAACATAGTTTAAAGACTGAGAAAAAACT
AAATTCAGGTACTCCAATCAAATCCTTACATATTAATATATGTTATGTAC
AAGTTGCGATTTTGTATAAGGTATAACTTTTATTTGTTCATTCTACAAGT
TGCAGCCAAAAAATGAAATGAATTATTTCAAATGAAAGATTTATAGGACT
TGGAATGAAGATTATGCCATTATTGAATATTCCATGGATGATCGATATAT
TAGTGTTGTAATTTTTGACTATTGACTATTTAAATACAAATTACTAAAGT
ATATATTCTGTGTAGTGTTGGATCGGTTTAAAAAATACTAAAAATCAGTC
CGAGTCAAATAAAATCTTGTCAGTCTTAGGACTGGTCCTTATAAGTCTTT
TTATGGTAAGTACGACAGCTGAAATGACGTTATTAGTTATGTCATTTCAG
TTAAAGCAAACATCCATAACATCCTTCAAAGAAACAAGATAACAAGTTTA
AAGTAAGAGTTGTGTGGGTAGAACTTATTATTATAGTTCTAGCTATCATT
ACTTACGTCAACGAAGTTATATTTTTCCAGGATTTTGGCAAAAGTTACTG
ATCGATTTTGATTAAACTTATTCTGTGGCACATTATCTAGTTCAAACGCC
CACCATTATATTACTCATAAAAATAACTTATAATTTGAAAATATCAAAAT
GAAATGATCGTTTAGATTAATAGTTTTTAATTATAATGACGAATGTTGTA
ATTAAATATACCTTTTTAATCCAAATAAATTGCAACTTGTTCAAAAATAG
TAATTTATGCACAAAAATACATATATTGAATCTTATCTAAAGTATGTTTC
TTATTTTAGATATTGTAGCTTCCTTGGAGAAAAGGGAAGACAAAATGAAG
AAAAAAGATCGCCTAATAGAGGAAGAAGTTCATTTGAGACAACGATGTGA
AAAGGAATTGGATACTCTAAAAAAAGACTATAATTCTCATCTGTCTCTCT
CAAAGAGACAATTAGATAAGAAGGATAAGCAACTTGCTGAATACAGCGAA
GAACTCAATTCCATGAAGGAAATCCAAAACCAGATATTCAATTTATCTAA
AAAACAAGCTGAAAAAAGCTAA

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