EMLSAT00000000145, EMLSAT00000000145-695992 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000145
Unique NameEMLSAT00000000145-695992
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1022supercontigLSalAtl2s1022:13242..14414 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000145 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000145EMLSAG00000000145-682911Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000643EMLSAE00000000643-709571Lepeophtheirus salmonisexon
EMLSAE00000000644EMLSAE00000000644-709572Lepeophtheirus salmonisexon
EMLSAE00000000645EMLSAE00000000645-709573Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769057auto769057Lepeophtheirus salmonispolypeptide
EMLSAP00000000145EMLSAP00000000145Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000145

>EMLSAP00000000145 ID=EMLSAP00000000145|Name=EMLSAP00000000145|organism=Lepeophtheirus salmonis|type=polypeptide|length=336bp
MNFLRSRSTVQINDNEPQSKLEAKVGEEESEEMRRSKAFERKVISNLRQT
VMDNGKKILAGDFENKFQVEFKGWRGSLLNISRSPSELLCDMKKKVKFHI
FKKGDPFFRTKQLDQFFRSSPFLSNKTYNSCAVVTNSGSLINSGHGTFID
SHDLIIRFNDGPTSGFEKDVGSKTSLRVINSKVPSLPEYGFLAPESLYSS
SPVLVWDPNNYTASVSEWYSHPYKPFFENFFAKRRMKPEEPLYLLHPGSL
WSIWDWIQSHSKWPMVPNPTTSGFLGLAIAIQHCSIVRKTGEACTFGDWH
PVSAEKLMALALNIGKKKEIYSDGFVTIQGFAGLEC
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mRNA from alignment at LSalAtl2s1022:13242..14414+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000145-695992 ID=EMLSAT00000000145-695992|Name=EMLSAT00000000145|organism=Lepeophtheirus salmonis|type=mRNA|length=1173bp|location=Sequence derived from alignment at LSalAtl2s1022:13242..14414+ (Lepeophtheirus salmonis)
ATGAATTTCCTTCGGTATATTGTATTTCTCTTCCTCNAACCAATCTCTTC ATTACCTGGTGTACTCTCTGGCAAACAGTCTCCAAATTAGAGGACTCTAA AGACATTTACAGTTCACGATCCACTGTTCAAATAAATGACAATGAACCGC AAAGTAAACTTGAAGCAAAGGTTGGTGAAGAAGAGTCTGAGGAAATGAGG AGGAGTAAGGCCTTTGAAAGGAAAGTCATCTCCAATCTGCGTCAAACTGT TATGGATAATGGAAAGAAGATCCTTGCTGGAGATTTTGAAAATAAATTTC AAGTCGAGTTCAAGGGTTGGAGGGGATCATTGCTAAATATCAGCCGGTCC CCATCAGAGCTTCTCTGTGATATGAAAAAAAAAGTTAAGTTTCATATCTT TAAAAAAGGTGATCCATTTTTTAGAACTAAGCAATTAGATCAATTCTTCA GGTCCAGTCCTTTTCTTAGTAACAAAACATACAACAGCTGTGCTGTAGTG ACAAATTCTGGTTCTTTGATTAACTCTGGACACGGAACCTTTATTGACAG TCATGATTTAATAATACGCTTTAATGATGGTCCTACATCTGGATTCGAAA AAGACGTAGGTTCGAAAACTTCTCTTCGTGTTATCAATAGCAAAGTTCCG TCTTTGCCTGAATACGGATTTCTGGCTCCTGAAAGCCTATATTCATCCTC TCCAGTACTGGTTTGGGACCCAAATAATTATACTGCTAGTGTTTCAGAGT GGTACTCACATCCATATAAGCCATTTTTTGAGAACTTTTTTGCAAAGCGA CGCATGAAACCAGAAGAACCTTTGTATCTTTTACATCCAGGAAGTCTATG GTCCATCTGGGACTGGATCCAATCTCATTCAAAATGGCCGATGGTTCCAA ATCCAACGACTTCTGGCTTTTTGGGACTAGCTATTGCAATTCAACATTGC AGCATTGTTAGGAGTTTTGAATATATTCCATNCCGCCCGCTATTCTAATA AATGTCATTACCATGGAATTCAAACAGAAACTGGAGAGGCATGTACCTTT GGAGACTGGCATCCCGTTTCTGCAGAAAAGTTAATGGCGTTGGCTCTCAA CATTGGAAAAAAGAAAGAGATTTACTCAGATGGATTTGTAACCATTCAAG GATTTGCAGGACTTGAATGCTAA
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