EMLSAT00000000183, EMLSAT00000000183-696030 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000183
Unique NameEMLSAT00000000183-696030
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending Publication
Mucin-like spermatophore wall protein 2 (AG F270) MLSWP2 male
  1. adult male
females missing eggstrings/producing no off-spring
-Missing-
16.08.2016 - 14:42
23.09.2016 - 14:50
A novel gene-family involved in spermatophore... more
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: female reproduction, no eggstrings, no spermatophore
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending Publication
Mucin-like spermatophore wall protein 2 (AJ F270) MLSWP2 male
  1. Adult
-Missing-
female reproduction, no eggstrings, no spermatophore
21.03.2017 - 09:08
25.04.2017 - 09:08
A novel gene-family involved in spermatophore... more
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1028supercontigLSalAtl2s1028:71411..72669 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000183 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000183EMLSAG00000000183-682949Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000859EMLSAE00000000859-709787Lepeophtheirus salmonisexon
EMLSAE00000000860EMLSAE00000000860-709788Lepeophtheirus salmonisexon
EMLSAE00000000861EMLSAE00000000861-709789Lepeophtheirus salmonisexon
EMLSAE00000000862EMLSAE00000000862-709790Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771352auto771352Lepeophtheirus salmonispolypeptide
EMLSAP00000000183EMLSAP00000000183Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000183

>EMLSAP00000000183 ID=EMLSAP00000000183|Name=EMLSAP00000000183|organism=Lepeophtheirus salmonis|type=polypeptide|length=359bp
MNWNIFALIGFLCCFQITLATNKQQTNEGYQVDSKGEVPEYSYKSGCKYQ
ETPWSDCDPFEFVQWRVRPLINGGAECEPKKNDTKQCGLDQLAPGTKWLL
AEHKKCISELEHLKDIIGDLHRWVDLIHERGXAMFNAFNELKKHLEDIQQ
QIIGLHRVNHDNEVIINRLKKELDEWKGKARKFQVELDELKTKYMELERQ
HNKMKREFSSCSSERAQCNAEQTTYESKISNIVQENRQLKSQLINAEKYK
DLVEAARKRVKSLEIQVDRLLKDIKKTQTDYNKCKIDVLNAKTRKAPKFV
KDTHVDLGMTMFITHNKTKVKTTYKPKYTYTTTTTTTTTTRYYPTTSTTT
XTTTTTYTT
back to top

mRNA from alignment at LSalAtl2s1028:71411..72669-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000183-696030 ID=EMLSAT00000000183-696030|Name=EMLSAT00000000183|organism=Lepeophtheirus salmonis|type=mRNA|length=1259bp|location=Sequence derived from alignment at LSalAtl2s1028:71411..72669- (Lepeophtheirus salmonis)
ATGAATTGGAATATTTTTGCTTTGATTGGCTTCCTATGTTGCTTTCAAAT CACACTTGCTACTAACAAACAACAAACAAATGAGGGATATCAAGTCGATA GCAAAGGTGAAGTCCCTGAATACTCCTACAAATCAGGTAAATTTATATTT GCATGTCTCTAAAGATATTTAGATATCCTTTTTGATTCTTTTCATAGGTT GTAAATACCAGGAAACCCCGTGGTCCGACTGTGATCCTTTTGAGTTTGTA CAATGGAGAGTTAGACCACTTATCAATGGCGGTGCAGAATGTGAGCCTAA AAAGAATGATACAAAACAATGCGGTCTAGATCAATTGGCTCCTGGTAATT TTCTCTATTTGTATTGATATAATGGGTTTAATTTACTTTTATTTCACCTT AGGAACAAAATGGCTCTTGGCCGAGCATAAAAAATGCATCTCTGAACTGG AACATCTCAAAGACATCATTGGGGATCTACATAGATGGGTTGATCTTATT CATGAAAGAGGTKAAGCCATGTTTAATGCCTTTAATGAATTGAAAAAACA TTTGGAGGATATTCAACAGCAGGTGAGTGTTGTTGAAAGTATTTCATTAG GAGAGACTATTGATTGATTATCTTTTTCTATCCAGATCATTGGTCTACAC AGAGTCAATCATGATAATGAGGTCATAATCAATCGACTTAAAAAGGAGTT GGATGAATGGAAGGGAAAAGCTCGGAAATTCCAAGTTGAGTTGGATGAGC TCAAAACTAAATACATGGAACTAGAGCGTCAACATAATAAAATGAAACGG GAATTCTCTTCTTGCTCCTCTGAAAGAGCCCAATGTAATGCAGAACAGAC CACCTATGAGTCCAAGATATCTAACATTGTTCAGGAAAATAGACAGCTCA AGAGTCAGCTCATCAATGCTGAGAAATACAAGGATCTTGTAGAGGCTGCT AGAAAGCGTGTGAAAAGCCTGGAGATCCAGGTTGATCGACTCCTGAAGGA CATCAAAAAGACCCAAACTGACTACAATAAATGTAAGATAGATGTTCTCA ATGCCAAGACTCGGAAGGCTCCAAAATTCGTCAAGGATACTCATGTTGAT TTAGGAATGACCATGTTTATAACGCATAACAAGACCAAGGTCAAAACAAC CTACAAGCCCAAATACACCTACACTACAACAACAACCACCACCACCACTA CACGCTACTACCCAACCACCTCCACTACAACAKCCACCACAACAACTACT TATACTACT
back to top
Add to Basket