EMLSAT00000000188, EMLSAT00000000188-696035 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000188
Unique NameEMLSAT00000000188-696035
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1029supercontigLSalAtl2s1029:128672..130553 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000188 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000188EMLSAG00000000188-682954Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000883EMLSAE00000000883-709811Lepeophtheirus salmonisexon
EMLSAE00000000884EMLSAE00000000884-709812Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772850auto772850Lepeophtheirus salmonispolypeptide
EMLSAP00000000188EMLSAP00000000188Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000188

>EMLSAP00000000188 ID=EMLSAP00000000188|Name=EMLSAP00000000188|organism=Lepeophtheirus salmonis|type=polypeptide|length=209bp
VDSSSPRANITRENSSPVISKESTCQTHVSSKHYSQPTITIEDDEIQDIT
PITEDKKYVVNNSMTIPDKPQEVDDSLHKEEFIEDQNEYESASGDFCYDE
EESITDHDLSGAPGPSGTSIPLDENKELNEKLNAEINRLIKRTPDGVYQC
ISCKKTTKRLQNLQFHIESMHVITDGFECHLCGTILKTRQYYQKHMKKHE
RSPKYIQTR
back to top

mRNA from alignment at LSalAtl2s1029:128672..130553-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000188-696035 ID=EMLSAT00000000188-696035|Name=EMLSAT00000000188|organism=Lepeophtheirus salmonis|type=mRNA|length=1882bp|location=Sequence derived from alignment at LSalAtl2s1029:128672..130553- (Lepeophtheirus salmonis)
GTCGATTCGTCTTCTCCAAGGGCCAATATTACAAGGGAAAATTCTTCTCC CGTAATTTCTAAAGAAAGTACTTGCCAAACTCATGTTTCATCAAAGCATT ATTCTCAACCAACTATTACAATCGAGGACGATGAAATCCAAGATATAACC CCAATCACTGAAGACAAGAAATATGTTGTTAACAATTCTATGACCATCCC TGATAAACCACAAGAAGTAGATGATAGTTTGCACAAAGAAGAATTTATTG AGGATCAAAATGAATATGAATCTGCGTCAGGAGACTTTTGTTATGACGAA GAAGAATCAATAACTGATCATGATCTTTCAGGGGCCCCCGGACCGTCAGG CACTTCAATACCTCTCGATGAAAATAAAGGTAGGAGTGTTTTAATTGTTT TCCTCGCTAAGTTCACTATATCTAGAAACGGTGTCATGATATATTATTTA TTTTTGATTCGATATAATTATGAGTTTAAGTTAAAATGTATTTTATTAAT TATAATTATTTATTCTTCATAGTCTTGGAAGAAAAAATCATCAATTTTCT TATTTATACAAAGATCACTCGAGCTCTAAAAAATATATATGCAATATAAA GATAGTTTTGGAATCTTTCAACATTAGATTTTTAAATATTTTCAGACAAT TTATTTATATCTTCAACAACAAACACATAAAAAAGCTTTGAATCTTAAAA ATACAAAAAAAATAAAAAAAATACCAAAAACTTGTAGCTTTTTCTAATCA GAATGCATTATTATATTCTTAAACAATGCGGTAAAATATTAGTGTCAAAT ACTTAAACATTTAAGCCAGATTAATTTAATTTAAAATAATTTGCTAGAAA ATCTGTTATTTCATAGAATAAAATGTTTTAAGTGATATTTTGATCGTTTT TGCTGGACTATATTTTTATATATAATTAGATAAATTCGACAAATCCATTC TTTATTTATTACTTCCATTAAAAATAGTAGATTAACTGTTGATATTACAA GAAGAATGTTCAAACATTTCAAATGTATTTTCTTCGTGTGTTTTCATTTT GATTTAGGCAATCTTCAAAAATGAATTGTTATTGATTCCAGGCAAATATA TTTATTTTTTTCAACCGACACGTGTGACAAAACTAGATGGCGGTGTACAG TCCTAAATTCGGACTGACTTGAACATTTTTGTTGCAAGTGAATTTATTAT TTTTAAGCAAATTATAAAAGGACTCCAGAATTTGACAAGTATCAACCTCA TCTAAAACTTCGAACGGTGGATGACTTCAATTGTGATTTCAAATAAGTAA ACATCGATTGATTCTATGATGTTATTTTGAGTTTTACAGTGATTTATTTT GATATGACACTGATAAAATGTTTGATGGTCCACAGTCTGAGACCCATTAA ATAACGGTGAACGGTTTGAGAACGATTAAATTTCTGTTCACAATCTGAGA CTGATTCTATACCTAAATCTTAAAACAATTACTTGAGACTGCTCCTAAAA AAATCTATATTGGACAGAGTCTCAAGGCTAAAAATTACTTGTTTTAATTT TCAGTATATACCCACACACTTTGATGTCCTCGTCAATTTCTAAAACAAAT ATTTATCTAAATGTATTTTTTGTCCTTACAGAACTGAACGAAAAATTAAA TGCAGAAATTAATAGACTTATAAAAAGAACACCTGATGGTGTTTATCAGT GTATTTCATGTAAGAAGACTACAAAGCGTTTACAGAATCTTCAGTTTCAT ATCGAGTCAATGCACGTTATTACAGATGGATTTGAATGTCATCTTTGTGG TACTATACTCAAAACACGACAATACTATCAAAAACATATGAAAAAGCACG AAAGATCTCCAAAATATATTCAAACACGTTAA
back to top
Add to Basket