EMLSAT00000000190, EMLSAT00000000190-696037 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000190
Unique NameEMLSAT00000000190-696037
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1029supercontigLSalAtl2s1029:166039..167214 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000190 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000190EMLSAG00000000190-682956Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000887EMLSAE00000000887-709815Lepeophtheirus salmonisexon
EMLSAE00000000888EMLSAE00000000888-709816Lepeophtheirus salmonisexon
EMLSAE00000000889EMLSAE00000000889-709817Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773686auto773686Lepeophtheirus salmonispolypeptide
EMLSAP00000000190EMLSAP00000000190Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000190

>EMLSAP00000000190 ID=EMLSAP00000000190|Name=EMLSAP00000000190|organism=Lepeophtheirus salmonis|type=polypeptide|length=256bp
MSRSERPNSTDGEDQDSHVTQVADSEGTWDYDFKPMPTYVLCIILMTSNL
FLLFLTLILPSICWRKKHCSIRPFSWLIYGHGLHWLIHLIGDQYWKYHHA
KSKLDGYIEFYIQTKNIRRAPFYIVSFGNALLLIASTILYENCKSYICEE
VDYLRGLVTIEALSILSLITKYLVNLKKFHETKAPPDVLRQDWMNRLISK
RVPTLGISDLIGASPDKIRNIVLDRQSEVISLMMVEIDELRLKIDQYTFT
TQPSNG
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mRNA from alignment at LSalAtl2s1029:166039..167214+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000190-696037 ID=EMLSAT00000000190-696037|Name=EMLSAT00000000190|organism=Lepeophtheirus salmonis|type=mRNA|length=1176bp|location=Sequence derived from alignment at LSalAtl2s1029:166039..167214+ (Lepeophtheirus salmonis)
TACAACTCTACTCCCCACCCAGTAAAGTACATAGTTGGAGTGAATAGTTT
CTACTTACTTACCAGTGTACTAAGTAAGCCTATAAATAAATAACAAAATG
ATTAAAATTCATTCGCATAATATAAGTTGATTAGTTTAGGAGGTGATGAG
TCGATCTGAAAGACCAAATAGTACTGATGGGGAAGATCAAGATTCTCATG
TTACTCAAGTTGCCGATAGTGAAGGAACATGGGACTACGATTTCAAACCA
ATGCCAACTTATGTTTTGTGTATCATTTTGATGACAAGTAATCTCTTTCT
TCTGTTTTTAACTTTAATTCTACCGAGTATCTGTTGGAGAAAAAAGCATT
GTTCAATTCGGCCATTTTCGTGGTTAATTTATGGACATGGCCTTCACTGG
CTTATCCATCTAATCGGGGATCAATATTGGAAATATCATCATGCGAAATC
AAAATTGGATGGATATATAGAATTTTACATTCAGACGAAAAACATACGAA
GAGCACCATTCTATATCGTATCATTTGGAAATGCATTATTACTTATTGCT
TCAACTATTCTTTATGAGAATTGCAAGTCTTATATTTGTGAAGAAGTTGA
TTATTTACGAGGACTTGTGACTATCGAAGCTCTTTCTATATTGAGGTCTT
GATCATATGGTTTCAAATCCATTAAATTAAAATAAGTTTTTTGATCCGAA
AATATTATGCTCATAAAAATATTTTATGGATTAGTACTCATTGGACAAAT
ATAAATTAAAACTGTTTAGTCTTTTTTGAAACCATAAGATTCTTTTTTGC
AGTCTAATTACTAAGTACCTTGTAAACTTGAAAAAATTTCATGAAACAAA
AGCTCCTCCAGACGTGCTTAGACAAGATTGGATGAATAGATTAATCAGTA
AACGTGTTCCAACTCTAGGCATAAGTGACTTGATAGGAGCTTCACCCGAT
AAAATACGTAACATTGTTCTTGACAGACAGTCTGAAGTCATAAGTCTTAT
GATGGTTGAAATAGATGAGTTAAGACTCAAGATAGATCAGTATACATTCA
CAACGCAGCCAAGTAATGGTTAATGTACTTTAAAATGTTTATTTTAACTT
ATTAATTTATATTTTAGTTATATTTATGCTCAAATAAATTTATTATGATT
TAATCAGAAAAAGTTTTATTGTAACC
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