EMLSAT00000000194, EMLSAT00000000194-696041 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000194
Unique NameEMLSAT00000000194-696041
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1029supercontigLSalAtl2s1029:172145..174843 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000194 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000194EMLSAG00000000194-682960Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000896EMLSAE00000000896-709824Lepeophtheirus salmonisexon
EMLSAE00000000897EMLSAE00000000897-709825Lepeophtheirus salmonisexon
EMLSAE00000000898EMLSAE00000000898-709826Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773826auto773826Lepeophtheirus salmonispolypeptide
EMLSAP00000000194EMLSAP00000000194Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000194

>EMLSAP00000000194 ID=EMLSAP00000000194|Name=EMLSAP00000000194|organism=Lepeophtheirus salmonis|type=polypeptide|length=289bp
MLRKKMSSSSSNDFYLSDEEMDEDINSLQYTSEDEDDEADDKEEVGGKAK
GSCFVDHEEGENGKGRNGKKKKKPGIIYLSSIPHGFNVSRTXAYFSKFGQ
VGRVFLQPNSRDKNKLKSFIEGWIEYMSKSVAREVAESINCTHVGGKKRS
KSHDVLWNVKYLPRFKWSHLTERMNYEKVVHNQKMRNEVSQAKKEVDYFR
TNIDKCKNIKTDEIQSPRPYDFFLKDTEXAIFAKRKRQSTTQSPSPYKKS
KREATIIPSKKARKNKGKGKSSTQKRSEFLKNVFGGSAD
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mRNA from alignment at LSalAtl2s1029:172145..174843+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000194-696041 ID=EMLSAT00000000194-696041|Name=EMLSAT00000000194|organism=Lepeophtheirus salmonis|type=mRNA|length=2699bp|location=Sequence derived from alignment at LSalAtl2s1029:172145..174843+ (Lepeophtheirus salmonis)
ATTACCAAATTCTTACATCATATTATTGAATATGACGTCAGAGATCAGAA
TATCCTGATGCTGAAGAATGTCACGTGAGTATAGTTGCCTAGAGTAAGAA
ACTATGGCACTGTAAACTGACTATAATTTGTACAAAAGAGATAATTTGTT
GCCGGAGGCGTGGTCATTTATCTAAGAAATATATTAGTCTGTATATTGGT
TGTTAATAGATTCTTCCATTGTGAATGTTGAGGAAAAAGATGTCGTCCTC
CTCAAGTAACGATTTCTATTTATCTGATGAAGAAATGGACGAAGATATAA
ATTCCCTTCAATACACAAGTGAGGATGAGGATGATGAGGCGGATGATAAA
GAGGAAGTAGGAGGAAAAGCGAAAGGGTCTTGTTTCGTTGATCATGAAGA
GGGTGAAAATGGTAAAGGACGAAACGGAAAGAAGAAGAAGAAGCCTGGAA
TTATATATTTGAGTTCCATCCCACATGGCTTTAACGTCTCTCGTACAKCA
GCCTATTTCTCCAAGTTTGGACAAGTCGGAAGAGTATTCCTACAGCCAAG
TAGAGTTTCTTCTCTCTTCATAACTTCTTTAATTAGTAATTTCTAACTCA
TTTACTTATTCTAGATTCACGGGATAAAAATAAATTAAAGAGTTTTATTG
AGGGATGGATTGAATATATGAGCAAGTCTGTGGCTCGGGAAGTTGCTGAA
TCTATAAACTGCACMCACGTTGGCGGGAAGAAGAGGAGTAAATCACATGA
TGTCCTTTGGAATGTCAAGTACCTTCCTCGTTTCAAGTGGTCCCATCTAA
CCGAGAGGATGAATTACGAAAAAGTGGTGCATAATCAAAAAATGCGGAAC
GAAGTGTCTCAGGCCAAGAAAGAAGTAGATTACTTTAGGACAAATATCGA
CAAATGCAAAAATATAAAAACTGACGAAATTCAATCGCCTCGCCCCTACG
ATTTCTTTTTGAAAGATACTGAARCCGCCATATTCGCTAAACGAAAAAGA
CAAAGCACGACACAATCCCCATCTCCCTACAAGAAGTCAAAACGCGAAGC
AACTATAATCCCATCCAAAAAAGCTAGGAAGAATAAAGGGAAAGGGAAAT
CATCGACTCAGAAAAGATCAGAGTTCCTTAAAAATGTATTTGGTGGATCA
GCAGATTAGCCTCCACCTTTTTCTCTGTTATCCTGCGTTTTTATTTCATA
ATTGGTCAAAATATATTTGACGACCTCGCTTTCTTGTTTGTGCAAATTTT
ATGGAAACATGGCCGTATGGAAGTAATTCGGGATAAATGGTATTTGTTAC
TATGTATGTTCACTATTTTGTAAAATAATTCATATTCATTCTGGTGGAAA
AAATAAATTTACAACTTTTTCTATGCTATCTTTTTTTTAATTATTTTTTT
TTACACTTAAACCTCTTAATAAAATAATATTAGAAGAAAAACAAAATAAG
ACTTATATGCACAAATAAACGGCTCTTTTCTCGTCAACAAGAAGCTTGTC
GATGATAATATCTTCTTTAGGGTGTGACACATCTATAAGGGATACTCCTA
GCTTGACCGAACCATCCTCTTCTTGGGATATGTCTTTCACTACGGAAACG
AATTGTTTATTTACTGACCGATTACTAAACCATATCGCGTCAGCAGGAGT
CCAATCTCCATTCACTGGGACTATATCTGATAGGTAATTAAGGTTAAACT
CGTGAGATCTATATTATGTATATGTTACCTGACAAAAAGGCTTTAATAGC
CTGCATAGGAAGGTTTCTAAATTGGGGCCACAATGGCTGCAGATTCTTTA
AATTTACCATAGCGAAGTCCCCGTAATCAACAAATTTAACAGTTATCGTC
TGATCGTCGAGTACTCTATCAACTTTAATTCGGTACCAAAATCCATCCGA
GTGAACTGCTGCAAAAAACGAATCCTTACTAAGGTCTTCCAAAGTTATGT
CGACGACACGACGAGTCGGACTAGAATAAAATTCGATCATTTCACTTGTA
AGTATTTCTAAGGATTCTGTTTGCCTCCAAGGTTTTACCTGTATGATTAA
GTAAAAAAAAAATATATTCGTAGGCTTAAGAAAATAAGAACAAAAATCGT
TTACATAAAAAGTGCTAGGATTTGCTGCTAATGTAACAGTGACATCAAAA
TATTCCTCTTTTTCTGGAATTTTGGGAGGAACTAAGCCTTTCAAAGATGC
AATATCAGAAAATAAAAGCTCATCTTGAGGTGATAATGAGCTTCTTTTCT
TATCATTATCATCTGTTATTACATTGGTGGGACTCGTGGAATTTTCGAAA
TCTTGATTATTAACAATAAAAAGTTCCTTTAGCTGAGATATAATTGAATT
AAATGAAACACTCAGTTTATCATCTTCCTTAGCATAAATTTCTACTTCAG
GTGTATCGCCGGATGAGGAAATGACTTTTAAAGATAAGAGCTTATTTTCT
GGAGCAAGATTTTTCAATCTATTTGTGGTTTCTTCTGTCCACTGATAAGT
GCACGGTATATTGGCTAATCTACACTTCAATGCCTAAAATAATATAAATT
AATTTATAAAATTTTCAATTTAAATAATTTATGAAAACTTACCTGATAAG
GAGTTTCCGATAAGAGTTTTGTAGATCCAATGTCACGCAAATCACTTAAG
TCAACTTCATCATGACTTCCATAATCAATATGTACAATCTCAACCTTAA
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