EMLSAT00000000261, EMLSAT00000000261-696108 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000261
Unique NameEMLSAT00000000261-696108
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s103supercontigLSalAtl2s103:1100399..1103132 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000261 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000261EMLSAG00000000261-683027Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001207EMLSAE00000001207-710135Lepeophtheirus salmonisexon
EMLSAE00000001208EMLSAE00000001208-710136Lepeophtheirus salmonisexon
EMLSAE00000001209EMLSAE00000001209-710137Lepeophtheirus salmonisexon
EMLSAE00000001210EMLSAE00000001210-710138Lepeophtheirus salmonisexon
EMLSAE00000001211EMLSAE00000001211-710139Lepeophtheirus salmonisexon
EMLSAE00000001212EMLSAE00000001212-710140Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780416auto780416Lepeophtheirus salmonispolypeptide
EMLSAP00000000261EMLSAP00000000261Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000261

>EMLSAP00000000261 ID=EMLSAP00000000261|Name=EMLSAP00000000261|organism=Lepeophtheirus salmonis|type=polypeptide|length=310bp
MTVITKTNLLNEKKKESTDASSAQDEAEKQKLNDCSSKKPIVEDVYTSVT
LNDGFDATDFRRGTVISQTCLLLIGIVAMTIGFMGATHLYRQLEHQSRFR
GVCHIPYQKLLDTSSAMITGDFKGRGNYKNMFSSSMNPWIQRDSVAEKIV
VGDSVELDFELDIETNSYESLEIPEISRGRYLHDFRTNKTAIIDPDAGRC
FVMPLNREEIEPPRNFIDIINKMRQGTYKLDFRKIRKDTRVVLPPLSNLE
EYGSFIEKACRDKKTFRLEEVTGARVIRDVESEKKIIPTPFIEYAGKAVL
HYNIINLDDI
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mRNA from alignment at LSalAtl2s103:1100399..1103132-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000261-696108 ID=EMLSAT00000000261-696108|Name=EMLSAT00000000261|organism=Lepeophtheirus salmonis|type=mRNA|length=2734bp|location=Sequence derived from alignment at LSalAtl2s103:1100399..1103132- (Lepeophtheirus salmonis)
ATGACTGTCATTACCAAAACCAATCTTCTGAACGAGAAGAAAAAAGAATC
AACTGATGCCTCCTCAGCCCAGGTATTCACTAATTTATTATATATTCAAC
AAATAAAAAATCTGTTAAAGTGTATGTTCTATTTAAATATATATATAATA
TATTTATATTATGTCCAGCCCTTCTTGTTTCTATGTAGATTACTCCCTTC
ATGAAGACAGATTACCTTAACCTTGATACTTTATAGTATCATCCATTCTG
AGCTTTGAGGTTAGTGGAGTAGAAAAAGTGTATCTTTGATGCATATTATC
GCCTATTGCAAATTTTCCATTTGATGTTTTTATATAAGTAGTAATACTTC
TTTCTTATGTAACTCTTTAATAAGCTGATTCCCATACTTAACAATCAAAC
GCAATTAGTTGAAGCTATATGAAGTACAATGGGTCTCTATAATTGAGTTT
GAAACACTTCCAAAAGGGTGTTGATAGCTTATTCCACCGAATATTTGCGT
AATTTGATACCTAGAGTATTCAAGTTTGATAATAAAGCTTTATTTGGATT
TGTTGCTGAGTCAAGCCAACTTATTTGCTCTACTAAAAGGAATCGAATAA
TCAGTTATTGTCTAAATGTTTTATATTTTTAAGACATATACGGAAATATA
CTGACATTTAATTTACTACTTAAAACATATTTTATACAAATCAATTATTC
TCAAATTGAGGAATAATAAAATGATTCCAATTTGTCCATGAGTCCCTATA
AGCCCCAGATTGTTATTTTGTACCTTCTATTTGATCAAAAACATAATCAC
TACACCCAATCCGCCTCCTAAAATGATTGTACCAAAGGCTAAAATAGCGT
TGTTCTTTAATATATCTTGTTCCATAGGCGTGTTGTAGGTGCAAAATAAT
ATGTAGAAGTATGTAAGCACACTGATTGATAGGATTGAAACTGTTCCAAT
GCTTATTCCTAGGGATATGGCTTTAGTCTTTTTGTCGGTTAGTGCCTTAC
GAAAAAAGGACTGGGCGTTGGGTTGTCTTAGTAACATGCTAATACTTATA
ACCAAACAAACTGTTGGCACAAAACATACTAGAGGGATAAGGTAATACTT
CATATCCACTTGAGTCATTGAGTCATACATCCAGTTAGCATAAAGCTTCA
CATATTCTGTATTCTGAAATTGGAGCTGATTCCTCATACTGCTAATAATG
GAAGAACGCTAATTTATGGATACACGAGAATATAAAAATATAAATAATTT
TTATCAATTTTAACAATTAATTTTTTTAATTCTTCTTAATTCAAGTCGCA
TAATTAGTAATTACATTAAAAAGTCATAAATATTATTTACATTACAGGAC
ACGGTCCCCAAAAAATTTATCATATAATATGTTTTAATCCATTTTTTGGA
ATGCAATTAAGAGTACCTAATTAAGAAAAGTTTGTGTTCCATATAAAATT
AGGATGAAGCTGAAAAACAGAAGCTTAATGATTGCTCATCAAAGAAACCA
ATCGTTGAGGACGTTTATACTTCAGTTACTTTGAATGATGGCTTTGATGC
CACAGACTTTCGTCGTGGGACGGTAATATCCCAAACATGCTTATTGCTGA
TTGGTATTGTTGCTATGACAATTGGCTTTATGGGTGCTACTCATCTATAC
AGACAAGTAAATTTGTATCTATTCTTCATTATTTCTAGTCTTTAATATTT
TTATATAATTACAGTTAGAACATCAAAGTCGATTCAGGGGTGTGTGTCAT
ATCCCTTACCAAAAATTATTAGATACAAGTTCAGCAATGATCACTGGAGA
CTTCAAAGGTCGTGGAAACTACAAAAATATGTTTTCTTCTTCAATGAATC
CTTGGGTAAGGGGCATTAAATATTCATGAAGTTCCTTTAATCGATTTTTA
TGTCGTATTAGATTCAAAATATGCCAATGTGATCAAATAATATTGATTGA
TTGATATTAATGCAAAAAAAAAAAAACTTTACTAAACTACAAGTGATTTT
TTTTCTCTTTTCAATTTACCACTGTTTAATTTGGGTCAATTATATAAATT
TATCTCTTATTTGTATCATTAAAGATTCAAAGAGACTCTGTTGCTGAGAA
AATTGTCGTTGGAGATAGTGTGGAACTAGACTTTGAATTGGATATTGAAA
CAAATTCATACGAATCTCTAGAGATTCCAGAAATATCTAGAGGAAGATAT
TTGCACGATTTTAGAGTGGGTTGATTTGAATATATGAATCCCTCCATCCA
TTTTAATTTGATTTAATTTTCTCTCTAGACAAACAAAACCGCTATCATTG
ATCCGGATGCGGGTAGATGTTTTGTTATGCCATTAAATCGCGAGGAAATT
GAGCCTCCAAGAAATTTTATTGACATCATCAATAAGATGAGACAAGGAAC
TTATAAGCTTGACTTTAGAAAAATCAGAAAGGATACCAGAGTGGTTCTTC
CTCCTCTTTCAAATTTGGAAGAATATGGGTAAGTTCTTTAACCCCTACTT
ATCATGTTTGGAGGATTGTTTTTGATGTCTTAAAATAATTTCTTAATTAT
TTGTTTTAGATCTTTCATTGAAAAAGCATGTCGAGATAAAAAAACATTCA
GATTAGAAGAAGTCACAGGAGCTCGAGTCATTAGAGATGTCGAGTCTGAG
AAGAAGATTATCCCTACTCCCTTTATTGAGTATGCAGGAAAAGCAGTTCT
TCATTACAATATCATAAATCTTGACGATATTTAA
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