EMLSAT00000000274, EMLSAT00000000274-696121 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000274
Unique NameEMLSAT00000000274-696121
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1041supercontigLSalAtl2s1041:81456..82777 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000274 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000274EMLSAG00000000274-683040Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001270EMLSAE00000001270-710198Lepeophtheirus salmonisexon
EMLSAE00000001271EMLSAE00000001271-710199Lepeophtheirus salmonisexon
EMLSAE00000001272EMLSAE00000001272-710200Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771637auto771637Lepeophtheirus salmonispolypeptide
EMLSAP00000000274EMLSAP00000000274Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000274

>EMLSAP00000000274 ID=EMLSAP00000000274|Name=EMLSAP00000000274|organism=Lepeophtheirus salmonis|type=polypeptide|length=249bp
MFFDFKSTRILTPIYHEESSSVYPRVETYFAETKLIFFIAKDKLSFCKNR
KTFVYLDFTADRASSVLKELDKLNKLSEESLTRQPEEVFDIVCKLGEGSY
GSVYKSIHNESSQVLAIKQVPVDTDLQEIIKEISIMQQCDSPYVVKYYGS
YFKNTDLWIVMEYCGTGSVLDIMKLRGLYNNLPKGEVLPLTEDEIATILC
DTLKGLEYLHFRKKIHRDIKSGNILLNNEGHAKLADFGVAGQLTVRHTF
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mRNA from alignment at LSalAtl2s1041:81456..82777-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000274-696121 ID=EMLSAT00000000274-696121|Name=EMLSAT00000000274|organism=Lepeophtheirus salmonis|type=mRNA|length=1322bp|location=Sequence derived from alignment at LSalAtl2s1041:81456..82777- (Lepeophtheirus salmonis)
ATGTTTTTCGATTTTAAATCAACACGAATCCTTACACCAATATATCATGA
AGAATCTTCCTCTGTGTATCCTCGTGTTGAAACGTATTTCGCAGAAACAA
AACTAATATTTTTCATTGCCAAGGACAAGCTATCCTTTTGCAAAAATAGA
AAAACTTTTGTATATTTGGATTTTACTGCAGATAGAGCCTCGTCTGTTTT
AAAGGAATTAGAGTACTTAAACAGTGCCAATTAGAATTTTATCCTAATTA
TTGGAATGGTAAATGGATCTCATGGATATTCCTTTATTTTTGAATGTGTG
AATATCGGAATAAACTGAAGCTTTTAATGACATAGTTAATTTTAAATATT
ATTTTCATTTCTATTATAAAATTTGATTATTAATGTGAATATTTTCTCAA
CGGGTAGATTAATTGACCAATTATAATTATGCATTTTCTAGATTGAAAAA
TACCTTATTATTGTCGTCTCCTTAATTAATTATTATAAATATTGTTTTTT
ATGTCTAAAWATTGTTTWCTTTAAAAAAAAAARAAGTCCTATTGTTTGTA
ACACAGTATTATTTGCTTCTTATCTTATAAGATTCCATTTCCTTTTTTTA
TTTATAAAGGTACTGCNNNNNNACCCTTCAGTTTTCATCTGTTTTGTCAA
TGTACCAAGGATGAAATATGAGGTTAGTTTGCTCTTTTTATAAATAAAAA
ATATATATATTGTATCTTCTTATTCTCATTAGTAAATTAAACAAATTATC
AGAAGAGTCTTTGACTCGACAACCTGAAGAAGTTTTCGACATAGTTTGTA
AATTAGGAGAAGGAAGCTATGGATCCGTTTATAAATCCATTCACAAYGAA
TCGTCCCAAGTGTTAGCCATCAAACAAGTGCCTGTAGATACGGACTTGCA
AGAAATAATTAAGGAAATTTCCATTATGCAACAATGTGATTCTCCATATG
TCGTAAAATACTACGGTTCTTACTTCAAAAATACGGATTTGTGGGTAAGA
TTTGAGAGATATGAGGTGTTAATCACATAAAAAAATTACTTTTTAGATAG
TAATGGAGTACTGTGGAACTGGATCCGTACTTGATATAATGAAACTGCGT
GGTTTATATAATAATTTACCTAAAGGAGAGGTTCTTCCTCTTACTGAAGA
TGAAATTGCTACAATACTATGTGATACTCTAAAGGGCTTAGAGTATCTTC
ATTTTAGGAAAAAAATTCATAGGGATATCAAGTCGGGGAATATATTGTTG
AATAATGAGGGACATGCAAAACTTGCGGATTTTGGAGTAGCTGGACAACT
TACAGTAAGGCACACATTTTGA
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