EMLSAT00000000280, EMLSAT00000000280-696127 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000280
Unique NameEMLSAT00000000280-696127
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1042supercontigLSalAtl2s1042:124020..125169 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000280 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000280EMLSAG00000000280-683046Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001289EMLSAE00000001289-710217Lepeophtheirus salmonisexon
EMLSAE00000001290EMLSAE00000001290-710218Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772740auto772740Lepeophtheirus salmonispolypeptide
EMLSAP00000000280EMLSAP00000000280Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000280

>EMLSAP00000000280 ID=EMLSAP00000000280|Name=EMLSAP00000000280|organism=Lepeophtheirus salmonis|type=polypeptide|length=364bp
TSSRYGICISIVASLYNYLVIAITTITYCTYYINVIGIALITDNNNVSYQ
YQLQSMWQKCWNTNTAAAAANMLQQAGVRYRERGPMKSWRPETMAEAIWS
VLQEGLSLSQAARKHDIPYPTFVLYANRVHNMLGPSRNGGSPALGELRPK
GRGRPQRILLGNWPESHXRQVIXAVVFREGGLSNISEDSFLLPPRSGEEE
LHSGASSSGIRPPSTHSERGEYSPPRKVTHTPPPTTPSSTSTSETLHNQL
KSLYGQHSSSPKSLMAAVAXXGGPLSELXMKEIDFDPLMLKTLMRLQGNG
VYDDADEAGSKRGDDGGKPSSSKSLPSLTLNPEVILTEISEGSKEAYDNL
RPPRDLIAAGSTDS
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mRNA from alignment at LSalAtl2s1042:124020..125169-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000280-696127 ID=EMLSAT00000000280-696127|Name=EMLSAT00000000280|organism=Lepeophtheirus salmonis|type=mRNA|length=1150bp|location=Sequence derived from alignment at LSalAtl2s1042:124020..125169- (Lepeophtheirus salmonis)
ACGAGTAGCAGATATGGTATTTGTATTAGTATTGTAGCCTCTCTATATAA
CTACCTAGTTATAGCTATTACTACCATTACCTATTGCACCTATTATATTA
ATGTTATTGGTATTGCTCTCATTACAGATAATAACAATGTGAGTTATCAG
TATCAACTCCAATCTATGTGGCAAAAATGTTGGAACACCAACACCGCAGC
AGCTGCAGCAAACATGTTACAACAAGCTGGAGTACGTTATCGCGAAAGAG
GTCCCATGAAATCCTGGCGTCCGGAAACCATGGCGGAAGCAATATGGTCC
GTCCTTCAAGAAGGTCTTTCTCTCAGTCAAGCTGCTCGTAAACATGACAT
CCCATATCCCACATTTGTACTCTATGCAAACCGAGTTCACAATATGCTCG
GTCCCTCAAGAAATGGGGGATCCCCGGCTCTCGGAGGTTTGTATCCCTGT
GTACATATATGTACTTTAACTAATCATTTTATTTACTCTAGAACTTCGAC
CCAAAGGAAGAGGACGTCCTCAGCGCATCCTTTTGGGAAATTGGCCCGAG
AGTCACGRCCGTCAAGTCATYSGAGCCGTGGTTTTTAGAGAAGGAGGACT
TTCAAATATTTCAGAGGACTCTTTTTTACTTCCACCTCGATCTGGTGAAG
AAGAGCTTCATAGTGGAGCCTCTTCCTCGGGAATTCGGCCTCCATCCACT
CATTCAGAGCGTGGTGAATATTCTCCGCCTCGAAAAGTAACACACACTCC
CCCACCGACAACTCCTTCCTCTACGTCTACTTCAGAAACTCTACATAATC
AACTCAAATCCCTCTACGGGCAGCATTCCTCCTCACCCAAGAGCTTGATG
GCTGCTGTGGCAGSCKTGGGGGGTCCTCTCAGCGAGCTCKTTATGAAGGA
AATTGATTTTGATCCACTCATGTTAAAGACACTCATGAGGCTTCAAGGCA
ATGGTGTATATGATGATGCAGATGAAGCAGGATCCAAGAGAGGTGATGAT
GGAGGAAAGCCATCCAGCTCAAAATCCCTTCCCTCCCTCACTCTCAATCC
AGAAGTCATTTTAACGGAAATATCTGAAGGTTCAAAGGAAGCATATGATA
ATCTAAGACCACCTCGAGACTTGATTGCTGCGGGCTCCACGGATTCCTAA
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