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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1044 | supercontig | LSalAtl2s1044:24227..29290 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000297 >EMLSAP00000000297 ID=EMLSAP00000000297|Name=EMLSAP00000000297|organism=Lepeophtheirus salmonis|type=polypeptide|length=1385bp
MLSRGGMIIRWISSGQPLCGGTRVRKXHMNYEKHMMKKTSKTQEIKRKSV
TLWHSMNVNQLAKVLEVPSHSLFDLILDIPGSEFIHDEETPIQDSDIFAE
LAKKLHFKAKFVASSDSLSSNPSSKIAELIPQPDNPTMYQPRSPVVAILG
HIDHGKTTLLDYLRKSSVTDNEFGGITQHIGAFSVPVPSFVQNTITFIDT
PGHAAFKSMRNRGVCATDIAILVVDACEGVLEQTLESLSMIKESGRPYIV
AINKIDKPNADVNATKESLKELGKVNLEDFGGDVQXISMSALKGTNVDGF
LNAIGALAEVLELKGDPTGQVRGVILESQMEAGIGRSTVFLVQKGTLKKG
DILVAETHYAKIRTIKNEFGKSLNNAGPSQVVRISGWKSLPSAGDEVLQS
SSEKKALDVVKTRNQVKMTEKALMETMDIEKRRSIEREAYVQNRLETLKS
GRIKSKKNYLKHMYSPSTGIPKLSILIKADVDGSLEAIMDCISTYDAHDL
VKLDIIEFGVGEITDNDVNVAQEFDGIVYAFNVPVSKSITSIHLMDRIKT
CNIIYKLMDDIRDEINVRMPLIDKEVEEGMATVLKEFIVTIDKKKSPVGG
CKVISGKIHRNSYFRIRRANSIIADKLKLKSLKHLKDEVPEISKGSECGL
MFEDAGIRFQLSDRLDREDDFSHMDISQPTPTSKGWSSKRYCIYPQFIIL
QLHSRSIVDEIRLITDKNKVPLKMNFYLGDVPDFKDLNPDVNEAYFMQVG
SLTLPLESNYRLCHNVVLHTKKSGQSTCIFIKISFTSNQISKKNEFNQVS
IVGIEIFGSPLKVQEVSRLSIFDLLYVDAKINDIRVQLYKRKEMAHASGR
YIYEKKIQRANEELKNGGEILAXMIIEARQHLDQKEFAKAKMKNAEIEKF
RGELLSNLEIEGLCEKNGQREENDIEDLEKFKKDYEIPALILDKPIPKES
REIGINTTPTVEKNTILSNLFGETSSLIDKEIDPSSELNEYGKSSSTENK
PNATQDEKSDFKTFEVPDSAIYDPPVEDDFSPRILDVPDNSVTDAQKNSE
ENRKFDGDLGKEEEENKKLNDDLRKGNEEEHNNYTYPTSPLPDEKMNNKL
PRKKYVEPKGESLKNVKLKINDSVAKELSLAISVYGQERIAKSVNKHAII
RMEGSEEILKRFKSLRNNHSPHSSKKVFKATSDILMRLLKDLLIKIFRDG
INLMMLLYNDFASRYSIPLDDLIYSAEESLFHLILKSSDVTNTKISVLSE
GSIQNLIRIKSLHKSDEFQKTILRPLSEKATTGKDLPPKCDEMKAKIVLW
YLQMQGRKELLPTRLVKRGTRFGVSAIQNVENKVKKQGKTILIILYKNNP
DWVQDYVIQNISSSSRKSIIVRSLLQEMEGRHKSQ back to topmRNA from alignment at LSalAtl2s1044:24227..29290- Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000297-696144 ID=EMLSAT00000000297-696144|Name=EMLSAT00000000297|organism=Lepeophtheirus salmonis|type=mRNA|length=5064bp|location=Sequence derived from alignment at LSalAtl2s1044:24227..29290- (Lepeophtheirus salmonis)
GTTCCATGTGCTGCGATGCTTTCTCGCGGAGGAATGATTATCCGATGGAT
CTCGAGTGGTCAACCGCTCTGTGGTGGGACCCGTGTACGAAAAAGKCACA
TGAATTATGAGAAACACATGATGAAAAAAACTTCCAAGACACAAGAGATA
AAAAGGAAGTCTGTTACACTGTGGCATAGTATGAACGTCAATCAATTGGC
AAAAGTACTCGAAGTTCCTTCCCATTCCTTATTTGACCTCATCTTGGATA
TCCCTGGATCCGAATTCATACATGATGAAGAAACGCCCATTCAAGACTCG
GATATCTTTGCAGAACTCGCTAAAAAACTTCATTTTAAAGGTTCATAATA
AATGCAAATATCTACGTACATAATTAATCATACTCATTATACTTCAAATA
ATTCTTTTTAGCTAAATTCGTTGCTTCATCGGACTCTTTGTCTTCAAATC
CATCCTCCAAAATTGCTGAACTTATTCCTCAACCCGATAATCCTACAATG
TATCAACCACGAAGTCCTGTCGTCGCTATTTTGGGACATATTGATCATGG
AAAAACTACATTGTTGGACTATCTGAGGAAATCATCTGTCACTGATAATG
AATTTGGAGGCATTACTCAGCACATTGGAGCATTTTCAGTCCCTGTCCCT
TCTTTTGTACAAAATACTATTACCTTCATCGACACACCTGGACATGCTGC
ATTCAAATCCATGCGTAATCGAGGTGTTTGTGCCACAGATATTGCCATTC
TTGTTGTGGATGCCTGTGAAGGCGTCCTTGAACAAACACTTGAGTCTCTA
AGTATGATCAAAGAGTCGGGGAGACCTTACATTGTTGCAATTAATAAAAT
AGATAAACCCAATGCGGATGTTAATGCAACAAAGGAATCGTTAAAGGAAT
TAGGAAAAGTTAACTTAGAGGATTTTGGCGGTGATGTTCAGAGKATTTCC
ATGTCTGCTCTCAAAGGGACTAACGTCGACGGATTTTTGAATGCTATTGG
CGCCTTAGCTGAAGTTCTTGAATTAAAGGGGGATCCAACTGGTCAAGTGC
GAGGTGTCATCTTGGAGTCACAAATGGAAGCTGGTATTGGGCGCTCCACT
GTTTTTCTTGTTCAAAAAGGAACTCTAAAAAAGGGCGACATCCTTGTGGC
TGAAACACACTATGCTAAAATTCGAACAATTAAAAATGAGTTTGGAAAGT
CTCTAAATAATGCAGGTCCGTCTCAGGTTGTACGAATATCAGGTTGGAAG
AGCTTACCTTCTGCTGGAGATGAAGTTCTGCAGTCATCGTCAGAGAAGAA
AGCCCTTGATGTAGTGAAAACAAGAAACCAAGTCAAAATGACGGAAAAAG
CATTAATGGAAACTATGGACATAGAGAAAAGACGATCGATTGAAAGGGAG
GCCTACGTGCAAAATCGCTTAGAAACTTTAAAATCTGGCAGAATTAAGTC
AAAAAAGAATTATTTGAAACATATGTATAGCCCATCAACTGGGATTCCAA
AGCTGAGTATTCTTATAAAAGCTGATGTTGATGGAAGTTTAGAGGCCATC
ATGGATTGCATTTCAACCTATGATGCACACGATTTAGTAAAACTTGATAT
TATAGAATTCGGAGTAGGAGAAATCACGGATAATGATGTTAATGTAGCAC
AAGAATTTGATGGGATAGTGTATGCTTTTAATGTTCCAGTCAGTAAGTCT
ATTACCTCCATTCATTTGATGGATCGGATCAAGACCTGTAATATTATTTA
TAAACTAATGGATGATATTCGTGACGAAATCAATGTTCGAATGCCTTTAA
TTGACAAAGAAGTGGAGGAAGGGATGGCTACCGTTCTCAAAGAATTCATT
GTTACAATTGATAAAAAGAAATCACCAGTAGGGGGGTGTAAGGTCATATC
CGGAAAAATCCATCGAAATTCATATTTTCGAATTAGGAGAGCCAATAGTA
TTATTGCAGACAAGCTCAAACTTAAGAGTTTGAAGCATTTAAAAGATGAG
GTTCCCGAAATTTCCAAAGGCTCAGAATGTGGATTGATGTTTGAAGATGC
TGGCATACGATTCCAATTATCAGATCGCTTAGAGTGCTACAAAATGACTC
AGGAACGAATGAAAACGGATTGGAACGGCGGRCTTTGATATTATATTTAT
TCATAGAGTTTAATAAATTGTGATATTCCAAATATCAATTATGATTTGTA
TTTAATATTCATGCTTATTCTCAGCCTATTAGAATTTTATAAACGCATAC
TACTTTATTTTGTTATAAATATTTGGTTTCATAGCAACACCATAAAAACA
GAAATACCTATATAAAATATAATTTATTCTTGGTCCTGTATCTTCATGTC
CATCATTTCATAAAATGAATTTATCGTACAAAATTTGCTTTGTATCAAGT
CGAGAAGATGACTTTTCTCATATGGATATATCACAACCTACTCCAACGTC
GAAGGGATGGTCCTCTAAACGCTATTGCATTTATCCACAAGTATATACCT
TATACTTATATCATGATATATCTATGGAAATGAATTCATTTTTTTTACAA
ATTTATTTACTATATTCATTATTTATTACAGTTCATTATTTTACAACTAC
ATAGTAGATCCATTGTAGACGAAATAAGATTAATCACAGATAAAAACAAG
GTCCCTTTAAAAATGAACTTTTACCTCGGAGATGTACCGGATTTCAAAGA
CCTGAACCCTGATGTGAATGAAGCTTATTTCATGCAAGTGGGAAGTTTAA
CCTTACCACTTGAGAGTAATTATCGTTTATGTCACAATGTTGTACTACAT
ACTAAAAAGTCTGGACAAAGCACTTGCATCTTTATAAAAATATCCTTTAC
TTCGAATCAAATATCTAAAAAAAATGAATTCAATCAAGTAAGTATAGTGG
GGATTGAGATTTTTGGTTCGCCTCTTAAAGTCCAGGAAGTCTCGAGATTA
AGTATTTTTGATTTGCTCTACGTGGATGCAAAGATAAATGATATACGTGT
TCAACTTTATAAGAGAAAAGAAATGGCTCATGCCTCTGGAAGGTACATCT
ATGAAAAAAAAATACAAAGAGCTAATGAGGAATTAAAGAATGGAGGTGAG
ATACTGGCAGSTATGATCATAGAAGCCCGACAACATTTAGATCAAAAAGA
GTTTGCAAAAGCAAAAATGAAAAATGCAGAAATAGAAAAATTCCGTGGGG
AATTGTTGTCCAACTTAGAAATCGAAGGCCTATGCGAAAAAAATGGTCAA
AGGGAAGAAAATGATATTGAAGATCTTGAAAAATTTAAGAAGGATTATGA
AATTCCTGCTCTAATACTTGATAAACCTATTCCAAAAGAATCCAGAGAAA
TAGGAATAAACACCACCCCTACTGTTGAAAAAAACACTATCCTCTCTAAT
CTATTTGGGGAAACCTCATCATTGATAGACAAGGAAGTAAGCATTTTGCA
CCATACTCTAGTAATATATATATATATATAAATAATTATTTTGAAACTAA
TAATAATTCTCTAAACTCAAATATATCTTCTTCTCCTTTATTGAGCCTAT
TATATACTAAAAGTGGTAAAAATTAATTTCATTTGAGTACTAAAACAGAT
TGATCCTTCATCAGAATTAAATGAATATGGGAAAAGCTCTTCAACAGAAA
ATAAACCTAATGCCACTCAAGATGAAAAAAGCGACTTTAAAACTTTTGAA
GTTCCAGATTCTGCCATTTATGATCCGCCAGTAGAGGATGATTTCTCTCC
CAGGATCTTGGATGTGCCAGATAACTCTGTTACTGATGGTATTTGAGAAT
AACTTGATGATAATTATATGCATATTCTTCTATTTCAGCTCAAAAAAATA
GTGAGGAAAATAGAAAATTTGATGGTGATCTAGGGAAGGAAGAAGAGGAA
AATAAAAAATTAAATGATGATCTTAGGAAGGGTAATGAGGAAGAACATAA
TAATTGTAAGGATTATTTATTTTCTAAATTACTAATTGATTGAGCAGTGG
AGCATTTGTGATTTATTTAATACATTTAGACACATATCCAACCTCTCCAC
TCCCAGATGAGAAAATGAATAACAAACTACCTCGTAAAAAATATGTGGAA
CCCAAGGGTGAAAGTCTAAAAAGTAAGAGGTCTCAATTCAATTATAATAT
TATCCTTATCATTTATGATGACATAGATGTAAAGTTGAAAATCAATGACT
CAGTTGCAAAGGAGTTGAGTTTGGCAATTAGTGTTTATGGACAAGAGAGA
ATAGCCAAATCTGTCAATAAGCATGCAATAATCAGAATGGAAGGTTCTGA
AGAAATTTTGAAACGTTTTAAATCCTTGCGTAATAACCATTCTCCTCATT
CTTCAAAAAAAGTATTTAAGGCAACCTCTGACATACTAATGAGACTATTG
AAAGATTTAGTAAACCAGCAATTAATAATTATTATTTATATTATCTATTG
ATAATTAAATAACATTGTTTTCTTCTTTTTAGTTGATTAAGATATTCAGG
GATGGAATAAATTTGATGATGCTCCTTTATAATGATTTCGCATCAAGGTA
TTCAATACCTTTGGATGATTTAATTTATTCAGCAGAAGAATCCTTATTTC
ATTTAATTTTAAAAAGTTCAGACGTTACCAACACAAAAATCTCAGTTTTG
AGTGAAGGAAGTATCCAAAACCTTATTCGAATTAAGAGCCTTCATAAGTC
AGATGAATTTCAAAAGACGATTCTCAGACCATTAAGCGAGAAGGCCACAA
CAGGAAAGGATTTGCCCCCCAAATGCGATGAAATGAAAGCCAAGATAGTT
TTGTGGTATTTACAAATGCAAGGGCGGAAGGAATTATTACCTACAAGGCT
AGTTAAAAGAGGAACTCGGTTTGGAGTCTCTGCAATTCAGAATGTGGAAA
ATAAAGTGAAGAAACAGGGAAAAACTATTTTAATTATACTGTATAAGAAT
AATCCAGATTGGGTTCAGGACTACGTTATTCAGAACATTTCTTCCAGTTC
GAGGAAAAGTATTATAGTTAGATCCTTGTTACAGGAAATGGAAGGTAGGC
ATAAAAGCCAATAA back to top
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