EMLSAT00000000352, EMLSAT00000000352-696199 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000352
Unique NameEMLSAT00000000352-696199
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s104supercontigLSalAtl2s104:416728..417960 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000352 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000352EMLSAG00000000352-683118Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001641EMLSAE00000001641-710569Lepeophtheirus salmonisexon
EMLSAE00000001642EMLSAE00000001642-710570Lepeophtheirus salmonisexon
EMLSAE00000001643EMLSAE00000001643-710571Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777454auto777454Lepeophtheirus salmonispolypeptide
EMLSAP00000000352EMLSAP00000000352Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000352

>EMLSAP00000000352 ID=EMLSAP00000000352|Name=EMLSAP00000000352|organism=Lepeophtheirus salmonis|type=polypeptide|length=139bp
MQLKEVNKHPWAIAGGKGELDLEAPMMDVVQTHIIPDKESIDDDVQRAIT
SLGCFKDKLKLIDELLKPTHNTEKVIYFLLLDRKKRKPSYEDDTEVILRS
RCGSTDPPRKRVDSYKSNGLNYSQLSQGSPLTPRRQLYR
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mRNA from alignment at LSalAtl2s104:416728..417960+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000352-696199 ID=EMLSAT00000000352-696199|Name=EMLSAT00000000352|organism=Lepeophtheirus salmonis|type=mRNA|length=1233bp|location=Sequence derived from alignment at LSalAtl2s104:416728..417960+ (Lepeophtheirus salmonis)
ATGCAAGTATTTTTGTTGGACTCAGAGTGGAATTACGGAACGACATCCGA
ATAATTCTTACTAAAAGCAAAGGTAGATTTGTTTTTATTGCCTCCCTCTC
GTAGTTGCTTGTAGCATATCTAATAAAACGTCAAATTATCAGAGTTATGT
ACCATGCTATTTTTCCATGCCAACAGTGCTTAGAATTTACAAACCAATAA
AAAAGTTCATTTCCTCATTATATATAGCTGAAAGAAGTTAATAAACATCC
ATGGGCTATTGCTGGGGGTAAGGGTGAATTAGATCTAGAAGCCCCTATGA
TGGACGTGGTTCAAACTCACATAATACCGGATAAAGAATCTATTGATGAT
GATGTTCAACGAGCTATTACCTCTTTGGGATGTTTCAAGGATAAGCTAAA
GCTTATTGATGAACTCTTAAAACCCACTCATAATACTGGTAAGTAACATC
ATGCTTACATTTCTACTTTGACTCTCCTCTTTTTCCATCCTGTCCTGGGA
TTATTCTATAAATTCATAAAATTTCCGATTTTATGAAGTACCAATGCCGT
ATGTTACAAATCAACGTAAAAGACTAAATCCAAAATATTTTTTTAAAGAA
CAAAATATATTTTCTAAAAGAGAAAAAAACAAGTATGAAAAATACTTTTT
CCTTAAATTTAATCATCTTTCAAAAAATCCTCTTTTTTTTGGAAATCAAG
GTATGGTCATTGGTCACCCTAAACAAAGAATGCTCTAAACATGGCACTCC
TTATTTCTCTTCATTTTTTGGCCAACTATGGGCTATTTTCAGAGTAAAAT
AGTTTCGCAAAGCAAAAAGGAATAAAACTAAAACAATATTGTAATAAATG
TCTTAAGGATTTTTGCGAGTGTTTTAGTCAAATTTTCTCTTTCATATCAT
AACTTCTCCACTCATCGAAAAATACAAAAAATAGCCTATAGTTGATGAAA
AAAAGAGTTTGCATTCCATTTAATATATTTACCTATTCAAACCCCTTTAC
GAAAATAATGACTCCTGTTTTGTAATTTAGAAAAAGTGATATATTTCCTC
CTTTTGGATCGGAAGAAACGAAAGCCTTCATATGAAGACGACACTGAAGT
TATTTTAAGAAGTCGTTGTGGATCCACGGATCCTCCTCGAAAAAGGGTAG
ACTCTTATAAATCTAACGGATTAAACTATTCACAACTTAGTCAAGGATCG
CCTTTAACTCCAAGGAGACAGTTATACAGGTAA
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