EMLSAT00000000380, EMLSAT00000000380-696227 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000380
Unique NameEMLSAT00000000380-696227
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1058supercontigLSalAtl2s1058:33311..34947 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000380 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000380EMLSAG00000000380-683146Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001726EMLSAE00000001726-710654Lepeophtheirus salmonisexon
EMLSAE00000001727EMLSAE00000001727-710655Lepeophtheirus salmonisexon
EMLSAE00000001728EMLSAE00000001728-710656Lepeophtheirus salmonisexon
EMLSAE00000001729EMLSAE00000001729-710657Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769997auto769997Lepeophtheirus salmonispolypeptide
EMLSAP00000000380EMLSAP00000000380Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000380

>EMLSAP00000000380 ID=EMLSAP00000000380|Name=EMLSAP00000000380|organism=Lepeophtheirus salmonis|type=polypeptide|length=179bp
MFLSLSTIRSQNSYTNCVKPGKHLDGCTSTSNRIFVGEQVTKGAIPWQVL
LRLSSDNSYFGACGGTIISHQFVLTAAHCFIYPTGVNKSWNIKLDISYIM
SGSTKFDNGQRHAINKLIVHPGYAWKLISNLGFLLTNDVAIVKVSPSFVY
GENVKALCLAKFGLSIPEGSTLTDTFKLI
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mRNA from alignment at LSalAtl2s1058:33311..34947+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000380-696227 ID=EMLSAT00000000380-696227|Name=EMLSAT00000000380|organism=Lepeophtheirus salmonis|type=mRNA|length=1637bp|location=Sequence derived from alignment at LSalAtl2s1058:33311..34947+ (Lepeophtheirus salmonis)
ATGTTTCTTAGTTTGAGTACAATACGATCCCAAAGTAATCTGGACAAAAC
CCTCACGAATTTTACTAATATAAAAAAGTGTATTCATTCTTTAGAGGGCT
TTCTCCCCTAATTAAAATTAACTCAATTAAAAGACAAATTTACTGCGGAG
TTGTTTTTAATTTCCAGGTTTTCTTGTTTGTATACTTAAAAACAAATCCT
AGGATTCAAAAATAAAAAATATACTTCAAATTTCTTATAAAACAGCTGTA
GAAATATTTATTTGTAATAGCCTTGTGCCTATANATATATTTTTTTAAAT
AAATCCAGTTCACACTTGCAACATACATTTTAATAAGAAGTCCTTTTTAC
AGGTTAAAATTTTAGTAGTCTATGTTGAACAAATCATTGAGTAGTTCCTC
AAAAGATCTCAAAAAATATGGACATTTTTCTATACCTTTGTGTGAAGATT
ATTATATTAGCTCAAATGGAATTAGTCTCTGGAATTGGCAAGTCCTTGGC
AATTTATCTGATTAAAATATCATTTTATAAGTTCAGAACGAAATTGATTT
TATTGGAATTATATTTAGTTTTAACTTTTGTCCTCAATTTATAAAGTTGT
ATTTACAGATATTTTTTCTTTCTTTCCATTCTAGATTCTTATACAAATTG
TGTAAAGCCAGGAAAACATTTAGATGGATGCACATCAACCAGTAATCGAA
TTTTTGTAGGAGAACAAGTTACCAAAGGAGCAATTCCATGGCAAGTCCTG
CTTCGACTAAGTAGTGACAATTCATATTTCGGCGCTTGTGGAGGGACAAT
CATCAGTCATCAGTTTGTTCTCACTGCAGCACACTGTTTTATCTACCCTA
CAGGAGTTAACAAGTCATGGAATATAAAATTAGACATTTCATACGTAAGA
GGCAACCCTGTTTGGCTTGTGTCTTTTAAAAATAACGTCGGTCTTTTATA
ATCGTAGATTATGTCAGGCTCAACTAAATTTGACAATGGCCAAAGACATG
CCATAAATAAATTAATTGTTCATCCGGGATATGCATGGAAATTAATTTCA
AATTTGGGTTTTCTACTAACAAATGATGTAGCTATTGTTAAAGTGAGTCC
GTCGTTTGTATACGGGGAAAATGTGAAAGCTCTTTGCTTAGCTAAATTTG
GTTTGTCCATCCCAGAAGGATCGACGCTTACCGGTGAGTCTATAGCACAA
ATATTAATTGAAATTATTCAACTCTTGGTTTAAACGTAGTAAGCGGATGG
GGAATCATGGAATATTCCAGAATAAAGAACGGGTTGCCTGAATTTAGTGA
GACCCTTATGAGGACAGAGCTGAAAACAATAAATTTCAGAAGGGGAAAGT
GTAGATACAATAAGTATTATCGTCACAATAAATATGCTAAAATTTGTACA
TACAATCCACCACATGATTCTTGTAATGGAGATAGTGGAGGMCCTATTAC
AATGGCTGMTGYTGGGCAATGTGTTCTAGTTGGGYTTGTTTRTGAAGGYG
GTATTTGTGGATCGGTTGACTATGGGGCGCTTATAGTGAATGTATCATTT
TACAGGACTTGGATATTGAAACAGATTGAGGAAAGTCGAGTATTATTTTT
TCCAAATTTTCTTACAGATACATTTAAGTTAATTTAA
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