EMLSAT00000000405, EMLSAT00000000405-696252 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000405
Unique NameEMLSAT00000000405-696252
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1063supercontigLSalAtl2s1063:96511..97521 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000405 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000405EMLSAG00000000405-683171Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001800EMLSAE00000001800-710728Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772050auto772050Lepeophtheirus salmonispolypeptide
EMLSAP00000000405EMLSAP00000000405Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000405

>EMLSAP00000000405 ID=EMLSAP00000000405|Name=EMLSAP00000000405|organism=Lepeophtheirus salmonis|type=polypeptide|length=336bp
MADRTRKGVEGAGDAIESVQIDGLVVMKLIKHCHEVDAANQGVAQGALLG
LVENSRLEITHSFPFPMSSEDGVDDEDFQLAIMRKLRLVNVDHMHVGWYQ
SSSFGNFLSPQLLESHLAYQTTVEESVCLIFDTAKTSKGFLSLKAFRLTP
SAVALYKSGDFSPESVRNLKVCHDAIFQEVPIHVKNSHLVNELLLELSEA
IPVETGSQFLDLGTASVLEYQLKQLMDNVDELNQESVKFIKHQNMAIKQC
HDKVRWHQKRQQENSARQARNEDPLPEEDMNKVFKPIPMPPKLNSLILSG
QILSSSQQISQFSSQSLAKLFISQGLQKAKLKDGIV
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mRNA from alignment at LSalAtl2s1063:96511..97521+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000405-696252 ID=EMLSAT00000000405-696252|Name=EMLSAT00000000405|organism=Lepeophtheirus salmonis|type=mRNA|length=1011bp|location=Sequence derived from alignment at LSalAtl2s1063:96511..97521+ (Lepeophtheirus salmonis)
ATGGCGGATCGCACAAGAAAAGGAGTTGAAGGAGCCGGGGACGCCATTGA
GTCCGTACAAATCGACGGATTGGTCGTGATGAAGCTCATCAAGCATTGTC
ACGAAGTGGATGCCGCAAATCAAGGAGTGGCCCAAGGGGCTCTTTTGGGA
CTGGTAGAGAACTCTCGCTTGGAGATCACCCATTCCTTTCCCTTCCCCAT
GTCCTCCGAAGATGGAGTTGATGATGAGGACTTCCAATTGGCCATTATGC
GGAAGCTGCGACTCGTGAATGTGGACCATATGCATGTGGGATGGTATCAA
TCCTCATCCTTTGGGAACTTTCTGAGCCCTCAACTCCTGGAGTCCCATTT
GGCCTATCAGACCACCGTGGAAGAGTCTGTGTGTCTCATCTTTGACACAG
CCAAAACATCCAAAGGCTTCCTATCCCTTAAAGCCTTTCGCTTGACGCCC
TCTGCAGTGGCCCTCTACAAAAGCGGAGACTTTTCTCCAGAAAGCGTTCG
TAACTTGAAGGTCTGCCATGATGCCATCTTTCAAGAGGTGCCCATTCATG
TAAAGAACTCCCATTTGGTCAATGAACTTCTCCTAGAGCTCTCTGAAGCA
ATCCCTGTTGAAACAGGCTCTCAGTTCCTTGACCTTGGCACCGCTTCTGT
TCTAGAGTATCAGTTAAAGCAATTGATGGATAATGTGGATGAGCTCAATC
AAGAGTCCGTCAAGTTCATTAAGCATCAGAATATGGCTATCAAGCAGTGT
CATGACAAAGTGCGATGGCATCAAAAGCGACAACAAGAGAACTCTGCCAG
GCAGGCTCGTAATGAAGATCCTCTCCCGGAAGAGGACATGAACAAGGTCT
TCAAACCTATTCCTATGCCACCAAAACTCAATAGTTTAATTCTCTCCGGG
CAAATCCTCTCTTCATCCCAACAGATTTCACAGTTTTCATCCCAATCCCT
TGCTAAGCTCTTCATTTCTCAAGGCTTACAAAAGGCTAAGCTTAAAGACG
GTATTGTCTAA
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