EMLSAT00000000524, EMLSAT00000000524-696371 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000524
Unique NameEMLSAT00000000524-696371
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1081supercontigLSalAtl2s1081:180113..182344 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000524 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000524EMLSAG00000000524-683290Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002267EMLSAE00000002267-711195Lepeophtheirus salmonisexon
EMLSAE00000002268EMLSAE00000002268-711196Lepeophtheirus salmonisexon
EMLSAE00000002269EMLSAE00000002269-711197Lepeophtheirus salmonisexon
EMLSAE00000002270EMLSAE00000002270-711198Lepeophtheirus salmonisexon
EMLSAE00000002271EMLSAE00000002271-711199Lepeophtheirus salmonisexon
EMLSAE00000002272EMLSAE00000002272-711200Lepeophtheirus salmonisexon
EMLSAE00000002273EMLSAE00000002273-711201Lepeophtheirus salmonisexon
EMLSAE00000002274EMLSAE00000002274-711202Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773978auto773978Lepeophtheirus salmonispolypeptide
EMLSAP00000000524EMLSAP00000000524Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000524

>EMLSAP00000000524 ID=EMLSAP00000000524|Name=EMLSAP00000000524|organism=Lepeophtheirus salmonis|type=polypeptide|length=535bp
MSNFKSESSKDDPLYPIAVLIDELRNEDVHLRLTSIKKLSTIALALGVER
TRSELIPFLTDTVYDEDEILLALAEQLGTFXPVVGGPDYVNCLLPPLECL
AIVEETIVRDKAVESLRHIADQHSPMDLETYFVPLVKRLAXGDWFTSRTS
ACGLFSVCYSRSSPAVKAELRTLFRSLCQDDTPMVRRAASSKLGEFAKVV
EVEYLKSDLIPMFVNLAKDEQDSVRLLSVDACKLLKDSESEVRAAAAHKV
RNFCQDLDPSVQETVIMNSILPCVKELVGDANQHVKSALASVIMGLSPIL
GKNNTIEYLLPLFLTQLKDECSEVRLNIISNLDCVNEVIGIQQLSKSLLP
AIVELAEDAKWRYLSFFILFSTIGQLGVEFFDEQLNALCMTWLVDHVFAI
REAATNNLKKLVEKFGTDWAQQTIIPKVIAMSRDQNYLHRMTCLFCINVL
AXACGTEITEKLMLPTVLSMASDTVANVRFNVAKTLSILGPKLNTSTVSS
QVKPTLNQLHEDNDFXVRFFASEAYAVLVALVKLD
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mRNA from alignment at LSalAtl2s1081:180113..182344-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000524-696371 ID=EMLSAT00000000524-696371|Name=EMLSAT00000000524|organism=Lepeophtheirus salmonis|type=mRNA|length=2232bp|location=Sequence derived from alignment at LSalAtl2s1081:180113..182344- (Lepeophtheirus salmonis)
ATGTCGAACTTCAAAAGCGAGAGTTCGAAGGATGATCCCCTCTATCCCAT
TGCTGTCCTAATTGACGAACTTCGGAATGAGGATGTTCACGTAAGTTATT
GTGGAGGAATCCCTGATCCTTGATGCACTCCTTTTCTCCCTTCAGCTTCG
TCTTACGTCCATCAAAAAGCTCTCGACAATCGCCTTGGCCTTGGGAGTGG
AGAGAACCCGCTCGGAGCTGATCCCCTTTTTGACAGACACGGTCTACGAT
GAGGACGAGATTCTGTTGGCCCTCGCGGAGCAACTGGGGACTTTCRCGCC
CGTGGTGGGAGGGCCCGACTATGTGAACTGTCTCCTTCCGCCCTTGGAGT
GCTTGGCCATCGTGGAAGAGACGATCGTGAGGGATAAAGCCGTTGAATCA
CTAAGACACATCGCAGATCAACATTCCCCCATGGACTTGGAAACGTATTT
CGTTCCTCTGGTCAAAAGACTGGCGGKGGGRGATTGGTTCACTTCCAGGA
CAAGTGCCTGTGGCCTCTTCTCCGTTTGCTACTCGCGCTCTTCACCTGCA
GTCAAAGGTAGTTTGTCCAATTCATGTCCACTCAGAGCTATTACTATTCT
ATTTCAGCCGAACTCAGAACTTTGTTCCGTAGTTTATGTCAGGATGATAC
TCCCATGGTACGTCGCGCTGCATCATCCAAGTTAGGGGAATTTGCTAAAG
TTGTTGAAGTAGAATATCTCAAATCTGATCTGATCCCTATGTTTGTTAAT
TTAGCTAAGGACGAGCAGGTTAGTCGCATGCTATTCAACTATTCCCTAGT
TCATTTCATTAAAATGGGAATTTATTCATCTAATTAGGATTCTGTTCGCC
TTCTCTCTGTGGATGCCTGCGTATCAATTTCATCTCTCCTTCAAACTGAA
GATGTTGAACAACTTGTAATGCCAACTCTGAAACATACTGCTGAAGACAA
GTCTTGGAGAGTACGATTTATGGTTGCCGATAAATTTACCGACTTACAAA
AAGCTGTGGGACCAGAAATTACTAAAGCTGACCTTGTTCCGGCGTTCCAA
GTATGTATACTATATTTTTATTATATATATAAACATATCTTTATAAAATG
TGTCTTTTAGAAATTGTTAAAGGATTCAGAATCTGAAGTGAGAGCAGCAG
CAGCTCATAAAGTAAGGAACTTTTGTCAAGATTTGGATCCATCTGTTCAA
GAAACAGTCATCATGAACAGCATTTTACCATGTGTTAAAGAACTAGTAGG
AGACGCTAATCAGCATGTTAAGTCTGCTTTAGCATCAGTTATTATGGGTT
TATCGCCCATTCTTGGAAAAAACAAGTAATTATTTCTTCGTACGCCTTTA
TAACTGCCATTCTTATAGTGTTCCCTTCAATTTCAGCACAATTGAATATC
TTCTTCCTCTGTTTTTGACCCAATTGAAAGACGAATGTTCAGAAGTTCGA
TTAAACATAATTTCCAACTTGGATTGCGTGAATGAAGTTATAGGAATTCA
ACAGCTATCAAAATCTCTGTTGCCTGCCATTGTAGAACTAGCCGAAGATG
CTAAATGGCGCGTTAGGTTAGCTATTATTGAATACATGCCTCTCCTAGCG
GGKAAGATTAAATTTATTTTAATAGATAAGATCTTAGTATCTTTCATTTT
TCATTCTCTTTTCTACAATAGGTCAGTTGGGTGTCGAGTTTTTCGATGAA
CAACTAAATGCACTTTGCATGACTTGGCTTGTAGATCATGTATTTGCCAT
TAGAGAAGCAGCAACGAATAACCTTAAGAAATTGGTTGAAAAATTTGGAA
CTGATTGGGCTCAACAAACAATTATCCCTAAAGTCATCGCAATGTCTAGA
GATCAAAATTACTTGCATAGAATGACTTGTTTATTTTGTATTAATGTATT
GGCGRAAGCCTGTGGGACAGAAATTACCGAAAAGCTTATGCTTCCAACAG
TTTTAAGCATGGCCTCAGATACGGTCGCCAATGTTCGATTCAACGTTGCT
AAAACATTAAGTATTCTTGGGCCTAAACTTAATACCTCGACAGTTTCGAG
TCAAGTGAAACCAACATTGAATCAGTTACATGAGGATAATGATTTCGMCG
TCCGATTTTTTGCATCCGAAGCGTACGCTGTTCTGGTTTGAGAGGCAAGT
AGATCTTCATAATTATTTTTAGAATATATTCTTAATAATATTTTTCTTTG
TTTTTTAGGTTGCTCTTGTTAAATTGGATTAA
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