EMLSAT00000000566, EMLSAT00000000566-696413 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000566
Unique NameEMLSAT00000000566-696413
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s10948supercontigLSalAtl2s10948:78..1326 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000566 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000566EMLSAG00000000566-683332Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002470EMLSAE00000002470-711398Lepeophtheirus salmonisexon
EMLSAE00000002471EMLSAE00000002471-711399Lepeophtheirus salmonisexon
EMLSAE00000002472EMLSAE00000002472-711400Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767865auto767865Lepeophtheirus salmonispolypeptide
EMLSAP00000000566EMLSAP00000000566Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000566

>EMLSAP00000000566 ID=EMLSAP00000000566|Name=EMLSAP00000000566|organism=Lepeophtheirus salmonis|type=polypeptide|length=375bp
MLELLSILSLTSHGFITQHIWAEQVRAFINLEACGAGGRELVFQSGPEHP
WLIEAYAEAAPYPFASVIGQEVFQSGVIPGDTDFRIFRDYGHIPGLDIAY
MKXGYVYHTKYDTEDKITPGSIQRAGENVLAVVRRVANSDILRDTSSHRS
GNIIYFDFLGLFLIYYPQWIGVVLNILVISLSFXIXYSKAINSFQYGVST
STYLQQLGYTFLVQLAGCVASLVVVTLIAVMLDAMGRSMSWYSKPYLIFF
LYMTPTIKAVVAVFHFALPRQKKFFRFTDGIWAIESLYFEVSKLVWTFFC
LIMTVFRVKSSFFCTIWVIFPMLGRLFLDYMYDRTAVAKKSKGYKWLMIH
LISLVIPLIFNMYLINTTFSMFVPI
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mRNA from alignment at LSalAtl2s10948:78..1326-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000566-696413 ID=EMLSAT00000000566-696413|Name=EMLSAT00000000566|organism=Lepeophtheirus salmonis|type=mRNA|length=1249bp|location=Sequence derived from alignment at LSalAtl2s10948:78..1326- (Lepeophtheirus salmonis)
ATGCTTGAACTACTCTCCATTCTCTCACTCAGTACAACCCCTCTAAAAAA
ACACCGTCATTTTTCTCTTTAATGGAGCTGAAGAAAATATTCTACCAGCC
AGTCATGGTTTTATTACTCAGCATATATGGGCTGAGCAAGTCAGGGCTTT
TATTAATTTAGAAGCCTGTGGTGCAGGAGGGAGGGAACTTGTGTTTCAAT
CAGGTCCTGAGCATCCTTGGCTAATTGAAGCCTATGCAGAAGCAGCTCCT
TATCCCTTTGCTTCAGTCATTGGTCAAGAAGTGTTTCAATCAGGTGTCAT
TCCAGGGGATACAGATTTTAGAATTTTCCGTGACTATGGGCACATTCCGG
GATTAGATATTGCTTACATGAAAAAKGGTTATGTCTACCATACCAAGTAC
GATACGGAAGATAAAATCACTCCTGGTTCCATTCAAAGAGCCGGAGAAAA
TGTTTTGGCTGTCGTGCGACGTGTTGCCAATTCAGATATCCTGAGAGACA
CTTCATCTCATCGTAGTGGAAACATTATATATTTCGATTTTCTTGGTCTA
TTTTTGATCTACTATCCTCAATGGATCGGCGTGGTTCTTAATATTCTAGT
CATAAGTTTATCTTTYTGRATAWCTTATTCTAAGGCAATCAATTCCTTTC
AGTATGGAGTGTCTACAAGCACTTATTTGCAACAGTTGGGATATACATTT
CTAGTACAGCTTGCAGGATGTGTTGCCTCTTTAGTTGTTGTCACATTGAT
TGCAGTCATGTTGGATGCAATGGGACGTTCCATGTCATGGTACTCTAAAC
CCTATTTGATATTTTTCTTATACATGACTCCTACCATTAAGGCCGTTGTT
GCCGTCTTTCATTTTGCATTACCCCGACAAAAGAAGGTAAGGCTCTAATA
AGCTTCAGAATACACACATGACAATAATTTTTCTCCACTTTAGTTTTTTA
GATTTACTGATGGGATATGGGCTATCGAGTCATTATACTTTGAAGTTAGT
AAATTAGTTTGGACCTTCTTTTGCCTTATTATGACAGTCTTTCGGGTTAA
ATCCTCATTTTTCTGCACCATTTGGGTTATTTTCCCCATGCTGGGTAGAT
TATTCCTTGACTATATGTATGATAGAACTGCTGTAGCCAAAAAATCGAAA
GGGTACAAGTGGCTAATGATTCATTTGATATCTCTGGTTATTCCTCTGAT
ATTCAACATGTACCTGATTAATACGACATTTAGCATGTTTGTGCCAATC
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