EMLSAT00000000687, EMLSAT00000000687-696534 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000687
Unique NameEMLSAT00000000687-696534
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1109supercontigLSalAtl2s1109:60650..64095 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000687 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000687EMLSAG00000000687-683453Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002974EMLSAE00000002974-711902Lepeophtheirus salmonisexon
EMLSAE00000002975EMLSAE00000002975-711903Lepeophtheirus salmonisexon
EMLSAE00000002976EMLSAE00000002976-711904Lepeophtheirus salmonisexon
EMLSAE00000002977EMLSAE00000002977-711905Lepeophtheirus salmonisexon
EMLSAE00000002978EMLSAE00000002978-711906Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770997auto770997Lepeophtheirus salmonispolypeptide
EMLSAP00000000687EMLSAP00000000687Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000687

>EMLSAP00000000687 ID=EMLSAP00000000687|Name=EMLSAP00000000687|organism=Lepeophtheirus salmonis|type=polypeptide|length=179bp
MTDPFSVFLFNIVKFDNDICQGNNDNDIGVCFTKSECTARDGRESGNCAS
GFGVCCIIESNCNSTNHPSEIVQYFQSPNYPQIDSMPYYCSRNIKIVNTD
ICQVRIDFLEFEMGGPSMRQAPFGQCLNDRMSLFFGNTRLGLSGGNSLCG
NMKGQHTPEGCLQYFPSPMGTIESFNYGA
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mRNA from alignment at LSalAtl2s1109:60650..64095-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000687-696534 ID=EMLSAT00000000687-696534|Name=EMLSAT00000000687|organism=Lepeophtheirus salmonis|type=mRNA|length=3446bp|location=Sequence derived from alignment at LSalAtl2s1109:60650..64095- (Lepeophtheirus salmonis)
ATGACCGATGTAAGTGGATTTTTAAAATAAGCAATTATTTTCCATGATGC
TCAATTTAGCCTTTTTCAGTCTTTCTATTTAATATCGTCAAATTTGACAA
TGATATCTGCCAAGGGAACAATGATAATGATATCGGAGTTTGCTTCACGA
AATCGGAATGTACAGCGCGGGATGGAAGAGAGAGTGGGAACTGTGCATCC
GGATTTGGAGTCTGTTGTATAAGTAAGGAATGTCCATATCATAATTAAGA
TTTTGATATCAAGCTTTTCTGTTAGTTGAAAGTAATTGTAACTCCACAAA
TCATCCTAGCGAGATTGTTCAATACTTCCAAAGTCCAAACTACCCACAAA
TTGATTCCATGCCCTACTATTGCTCTAGAAATATCAAGGTAAAATCACAT
ATCACATGACCCATTTACCTTTTCAAAATTATATTACTCTCAAGATTGTT
AATACTGACATTTGTCAAGTTCGTATTGACTTTTTGGAATTCGAAATGGG
AGGGCCGAGTATGAGACAAGCTCCTTTTGGTCAATGTCTTAATGACAGAA
TGTCTTTATTCTTTGGAAACACAAGGCTTGGACTCTCTGGCGGGAATTCT
CTTTGTGGAAATATGAAAGGTCAACACAGTAAGTTCTTTGAAGGTGTTAA
CTGGGAATGTATTGCCTCTAAAATTAGATCCTTTAAATCTAAAAGACGCA
ATATTTGCTGATTTATATCATCATGAATAGTTTTGAATAAGTCCTTATTT
ATTTGGTGTAGTCCATTTCAGTCAATTGGTCAGTACTTCAGACTGTTAAT
ACGAAAACTGATAAATTAAGAATAAATAAAGTTCATTGATGTCATCAAGT
ACCGAACTTCATAAGTTTTTAAGTGGGAAATGTAGGACTAAACTGGAGGG
GATTGTAGTAAGAACCGACGTAACACTTATCATGGATATGATCTAGTGAC
GTCATTACCAATACATCACAGCTATATTGGATTTTTTAARGTTCAATGCT
AATAAGAATTGTATATACTTTAATTAGACCTTAGTTAAGAATAATGACCA
TCCATTATTCTGCATGAAGGAAAATTGGAAGTTTTATTGAACGAATTTAA
TTGGTAAGCTGATATAGGTCAATAAGTAGTGAAACTCATGCAACATATAG
GGCGTTTACAAATAGCTGACGCTTTTTATGGACCAATAGGAGAAACAGGC
TCAATTTTAAGTTAAATATTAAGAATCGATACAACCCAAGTTCAGCCACA
TTTAAATTTGAACCATGCTAACTCCAACATTATTTTTATACTTTAGTCTA
TATAGATGTAAGTGAAACAACTGACGAATCTCTACGATTCTTTACCATGG
TTGGGAATGAGGATGACATTCCGGGCTCTACAATTTCTCCTCTTGCAAGT
ACCCAATATAAGTGGAACCTCCGTATACGACAGATTAGTTGTAGTGACTA
TTCTGATGTTCGAGGTATGTTTTTTTAAAGATTTGAGTACATATCATAAA
GTAATACTTGTATTTGGGACTTGAATGTAAAAATACTCACATAATGTCAC
ATAGGGGGATGCCTAGCGAGTAATTACTTGTTGTGAGTTAAAACTTTCAA
AAAMTATCCGTATCTTTATTTATTAGCTTGTACTTTTCTTATGAGTACTT
ATAATAGAAAAAAAATACATCGGGATGTTCATTGGATTTTGATTGACATT
TTGGTATATTAAGGCTGTAGTAGGCCTATATTTAACAGTAAAATTTTCAA
TCTGTTACAATGAACAACAGCTATAGTCAAAAAATATTATACTGAATTGA
GGGATTTCATGTGGGCTCTCTATTAATGATTTTGGGCATTTTGGCAGCCT
AAAAATCAAGTTTAATAGCAATAAAAAACCTGTTTTTATTTGTTTATTTT
TATAAACATATCAACATTATGCTTTAATAAAATAAAAGGTAACTCCTCAA
ATTTTTTTTGGTGTTTTCTCTGTTTTTCATGAGCCTACTCACATAAAACT
ACTCAATCAATACTTAGACGTACTTTCCTTATGAATAAAAAAATAATAAA
ACAAAATATGATTTGCTGACCCATACTGGTACTTTAGCTCGTTACTAAAC
CTAATCTAATGTCACATGCCTTTTATTAAGTTTTATATCAAGTTCTTCCC
TTTTTTTCTTCTTTAATATGAGATGAACTAAACGCTTATAAAAAGTATTG
GAATCTTTATGAATTAAAGTTTTCTCCCTGTTATTTGTCATATATTTATA
GGTGTGTCCGCAGGGGGCGTTCTGAAGGGGATTTAGCCATCTCTTAAATT
AAAATTTTTGCTTTTTACTAGAAAATCTAATATTTGATTTTTTTTTTCAA
AAATATAATATATTAAATAAAATATAATTTTTTAATTGGTGTAGATTTTT
GAATTTTTATTCCAAAATTTTTACATTTGTTATAAAAATATTTAATTTTT
TTTGCAAAAAAAATTAAATATTGTTATATGTTAACAACTCCCTATTTTTG
AAATAATTTTCTAAAAAATTTAATTTTTAGCTAATACCATATTTTTTTTT
AATATTATAAATTATTTTCAAACAAAAAGATTTTTTTGTGAATGCCTTGG
AATTTTTTATTTTTTTCGCCAAACATTTAATTTTTCATGTTATTTTCCCC
CAATAAATTATTTATGGATATGTTTTATAAAAAATCAAAATACCAAGCGG
CCCCCTCCCCTCTCCAAAAAAAAAATCTATAATCCTGCAGACGTTCATGA
TATATCCTTATTAATGTGTAATTTCGAATATTGATATAAATACGGGTCTT
AGTTCAGCAGTATCATATGTCTATCTTCCCCTTTCTCTTTACACTTTTTC
AAAAATCCCAACTCTATCCCAAAGTACTTATACAAAAATGGTTAAGTTTC
GAAATTATCCGTTAAGAGGGATATACCCCAAAAACCATAACAATACGTCA
ATTAATAAAAAGTTTTACTAAATTATAGGAATTTCAAACATTTGAAGTCA
ACATAAAATTCATGTTGAAATGGAATCGTATCCTTTGCACAAAATAACTC
CCCCCCCCCCCCTTTAATATTAGATTACTATTCTCCGAATTGCAAAATTG
CATTATATATGGCTTTTTCTTTCTTCTTGTGTATTTTATTTTTCAATTTC
CTTCAGCCTGATAGAAGTAAAAAAAAAATATTGTTTGTAAAGATATGTAT
TAGATTTATGTAAATAAATAAGCTACAACAAAGGTAGCAAAATTTGCATA
ATGCAATTTTTATTCTATTACATTAAACAGGTTGTTAAATATAAGCTATA
TAAAACTTATTTAAGCAAATTCTACATAATAGTAATTTAATTTCGTGATT
TATGAAGAGTTTATTTAATTTTATATAGCTCCAGAAGGATGCCTACAATA
CTTTCCTTCCCCCATGGGAACCATTGAATCTTTCAACTACGGGGCA
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