EMLSAT00000000712, EMLSAT00000000712-696559 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000712
Unique NameEMLSAT00000000712-696559
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1110supercontigLSalAtl2s1110:30344..32607 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000712 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000712EMLSAG00000000712-683478Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003088EMLSAE00000003088-712016Lepeophtheirus salmonisexon
EMLSAE00000003089EMLSAE00000003089-712017Lepeophtheirus salmonisexon
EMLSAE00000003090EMLSAE00000003090-712018Lepeophtheirus salmonisexon
EMLSAE00000003091EMLSAE00000003091-712019Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769906auto769906Lepeophtheirus salmonispolypeptide
EMLSAP00000000712EMLSAP00000000712Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000712

>EMLSAP00000000712 ID=EMLSAP00000000712|Name=EMLSAP00000000712|organism=Lepeophtheirus salmonis|type=polypeptide|length=683bp
MSPMKMFKKKKSGKSFGVQITTMDAELQFSLDVKATGQELFDLVCRTIGL
RETWYFGLQYTDSKGYVAWLKMEKRVRDQDVNMISKGPVSFLFLCKFYPE
DVSEELVQEITQHLFFLQVKQSILSMDIYCPPEASVLLASYAVQAKYGDY
DPEAKGLFSNNQDLLPQRVIEQYKMTPQMWEDRIKVWYADHKGMSRDEAE
MEYLKIAQDLDMCGVNYFEIFNKKDSNLWLGVTNLGLNIYEADNKLSPKI
MFPWSEIRNISFDDKKFIIKTVDKSAPNFTFYSKKLRMNKLILDLCIGNH
DLFMRRRKPDPMDVQQMKAQAKEEKMRRQIERSKLLREKQLREEVEREKA
ALEQRLIQYQEEIRMSKEALQRSEESADLLAEKSVIAEQESALLHQKATE
AETEVSRIKLSVIKTEEEKSLMENKARDAEMLVNRLAEEAERRKYEANEL
KKELEMARDAEKMAKDKLMNFLSSSVPITSVTLSESLITNGIAALQQHSH
NFQHNNHXEPSTSSSNSNSPMLTSPSGSNSGYNNNTNNINPISSNMFQDA
LSSTSSVPLPSFNLSCNNESNNNLSSHPFLCYTTNNSSSSFYDSQHLMSE
SDMDQLSLEIERERFEYLEKSKHLQEQLKTLKSEIEELKVDDKTSPLDAI
HRELFEQGDNKYSTIQKVKRGSTTSRVAFFEEL
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mRNA from alignment at LSalAtl2s1110:30344..32607-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000712-696559 ID=EMLSAT00000000712-696559|Name=EMLSAT00000000712|organism=Lepeophtheirus salmonis|type=mRNA|length=2264bp|location=Sequence derived from alignment at LSalAtl2s1110:30344..32607- (Lepeophtheirus salmonis)
ATGAGTCCGATGAAGATGTTTAAGAAGAAAAAGAGTGGGAAATCCTTCGG
CGTGCAAATCACGACCATGGACGCGGAGCTTCAATTCAGCCTGGATGTGA
AAGCMACGGGACAGGAGCTGTTTGATCTGGTGTGTCGAACGATTGGCCTC
CGTGAAACATGGTACTTTGGCCTCCAGTACACGGATTCCAAGGGCTACGT
AGCTTGGTTGAAAATGGAGAAGCGAGTTCGTGATCAGGATGTGAACATGA
TTTCAAAGGGGCCCGTCAGCTTTCTCTTTCTATGCAAATTCTATCCAGAG
GATGTGAGTGAAGAACTCGTCCAAGAAATCACGCAACATCTCTTCTTCCT
CCAAGTGAAACAGTCCATTCTCAGCATGGACATATACTGTCCTCCAGAAG
CGTCCGTCCTTCTTGCATCATATGCTGTCCAAGCCAAGTATGGGGATTAC
GATCCTGAGGCAAAAGGTCTCTTCTCTAATAATCAAGACCTTTTACCACA
AAGAGTAATCGAACAGTACAAAATGACTCCACAAATGTGGGAAGATCGAA
TCAAAGGTAATAGATTCATCAATTCATCCACACCACTATAGTTTTTACTA
ATGATCATTGTATTTATTTATTAAATAGTTTGGTACGCAGATCATAAAGG
AATGTCCAGAGATGAAGCAGAAATGGAATACTTGAAAATAGCGCAGGATC
TAGACATGTGTGGAGTCAATTACTTTGAGATCTTTAACAAAAAAGACTCC
AATCTATGGCTTGGTGTTACAAATCTTGGACTCAACATCTATGAAGCAGA
TAATAAACTCTCTCCGAAGATCATGTTCCCTTGGTCTGAAATACGAAATA
TCTCATTTGATGATAAAAAGTTCATCATTAAAACCGTGGATAAATCTGCC
CCCAATTTCACTTTCTACTCCAAAAAACTGCGTATGAACAAGTTGATATT
GGATCTATGCATTGGAAACCATGATTTGTTTATGAGAAGAAGAAAGCCGG
ATCCTATGGATGTTCAGCAAATGAAGGCTCAAGCCAAAGAAGAAAAGATG
AGGAGACAAATCGAGCGCTCCAAGTTGCTTCGAGAGAAGCAACTTCGCGA
GGAAGTTGAAAGAGAAAAGGCAGCCCTTGAGCAAAGACTCATTCAGTATC
AGGTATGTAAATGATATATGTATTCATTCCCAAAAACGGAATCTTTTTTA
GCTCATAAATTTTTTGCTTCATATACATTTTAGGAAGAAATTCGAATGTC
AAAAGAGGCTTTACAAAGATCAGAGGAATCTGCTGATCTTTTGGCCGAAA
AGTCTGTAATTGCTGAACAAGAATCCGCTCTTCTACATCAAAAAGCAACT
GAAGCTGAGACAGAGGTTTCAAGGATTAAATTATCTGTTATTAAAACAGA
AGAAGAGAAATCACTCATGGAGAACAAGGCTCGCGATGCAGAAATGTTAG
TGAATCGCCTTGCAGAAGAGGCAGAAAGACGTAAATACGAGGCTAACGAA
TTAAAGAAGGAACTAGAAATGGCAAGGTAAGGAGGAAATCATGTAAATAT
GATCTATAATATATAGTATTCATATATAATTCCAGAGATGCAGAGAAAAT
GGCTAAAGATAAGTTAATGAACTTTCTATCATCCTCCGTCCCAATAACGT
CTGTTACTTTGTCTGAATCATTAATAACGAATGGAATAGCTGCTCTTCAA
CAGCATAGTCATAATTTTCAACACAATAATCATKCCGARCCATCCACTTC
TTCATCCAATAGCAATAGCCCCATGCTTACGTCTCCAAGTGGAAGTAATT
CCGGTTATAATAATAATACGAATAATATCAATCCCATCTCTTCCAATATG
TTTCAAGATGCACTGAGCTCAACTTCTTCAGTGCCTCTGCCTTCCTTTAA
TTTATCATGCAACAATGAGTCAAACAATAACTTATCCAGTCATCCCTTCC
TTTGCTACACTACAAATAACTCTTCTTCATCATTTTATGACTCCCAGCAT
TTAATGTCCGAATCCGACATGGATCAATTATCTCTTGAGATCGAAAGAGA
GAGATTCGAATATCTGGAAAAATCAAAACATTTACAAGAGCAGCTAAAGA
CCCTCAAAAGTGAAATTGAGGAGCTTAAAGTGGACGATAAAACATCTCCA
CTAGATGCTATCCATAGAGAGCTCTTTGAACAGGGTGACAACAAATACTC
AACCATTCAAAAAGTGAAAAGAGGCTCAACCACCTCTCGTGTTGCTTTCT
TTGAAGAATTATAA
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