EMLSAT00000000731, EMLSAT00000000731-696578 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000731
Unique Name	EMLSAT00000000731-696578
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1117	supercontig	LSalAtl2s1117:130402..134840 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000731 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000731	EMLSAG00000000731-683497	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000003151	EMLSAE00000003151-712079	Lepeophtheirus salmonis	exon
EMLSAE00000003152	EMLSAE00000003152-712080	Lepeophtheirus salmonis	exon
EMLSAE00000003153	EMLSAE00000003153-712081	Lepeophtheirus salmonis	exon
EMLSAE00000003154	EMLSAE00000003154-712082	Lepeophtheirus salmonis	exon
EMLSAE00000003155	EMLSAE00000003155-712083	Lepeophtheirus salmonis	exon
EMLSAE00000003156	EMLSAE00000003156-712084	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto772899	auto772899	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000731	EMLSAP00000000731	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1117:130402..134840+

protein sequence of EMLSAP00000000731

>EMLSAP00000000731 ID=EMLSAP00000000731|Name=EMLSAP00000000731|organism=Lepeophtheirus salmonis|type=polypeptide|length=364bp
MISLFPFIIFLYLTNPLESKRARPNVILFIADDLGYGDLSGYGHPTSNTP
KIDKIISKSMWFTNYYAASPICSPSRASIITGEYPSRSACPLFENDVIKE
QPADLTTLTQRYTNKAKEFLKSNIDNPFFLTYAFHQPHHPQFAGSKFTNS
SFRGGIGDALNEMDDAVGQILDSLKELGLRSKTLILFTSDNGPSLQRQER
GGCAGLFRCGKGTTYEGGVRVPFFMHWGGFVHPWTSHTLITSLDIYPTLM
SMISYQSNELSDGNNYDFACTTKANRTLHNPPLLFDLNLDPGERYPLDPN
KNRDLLLEIQYVTMNIMKTMTWADGEMKKPNSNSAQPCAQKGCRDFPSCC
STKTKLPLISIIHK

mRNA from alignment at LSalAtl2s1117:130402..134840+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000731-696578 ID=EMLSAT00000000731-696578|Name=EMLSAT00000000731|organism=Lepeophtheirus salmonis|type=mRNA|length=4439bp|location=Sequence derived from alignment at LSalAtl2s1117:130402..134840+ (Lepeophtheirus salmonis)
CCTGTACATTTTTTTTAACAAATCGTGTCGACTCGATCAACTCAAGCAAT
ACAACACTAATGTAATTATATTTGTTTATATCTGTAATTCTCTCCGAAAA
CTAAAAACATAGCAAATTTAATCTTTGTATGTACAAAAGTATCTTCGCCT
CGTAATCACTCAAAACAGGAAATAAGTTTCCTTTTCAACTTTTTTTTCTA
TCTTATGTGTTAATACAAAATTTTATATCTGTTCGACTCTACGTTCCTCT
TCAAAGATACTGTTATAATCGATGGAAAAGCAACAATGATTTCGTTATTT
CCTTTCATCATATTCCTATACTTGACAAACCCCTTGGAATCAAAACGAGC
AAGACCTAATGTCATACTTTTCATTGCAGATGATTTGGGTTACGGAGATC
TAAGTGGATATGGGCATCCAACTTCAAATACTCCGAAGATTGATAAAATA
ATTTCCAAGTCGATGTGGTTCACAAACTATTATGCTGCAAGTCCCATATG
CAGCCCTTCAAGGTAAGTTGAATTGAAAATCAATTCTGCTACAATCACAT
TCTATTCCAAATTAGGGCCTCAATTATCACAGGTGAGTATCCCAGTCGAT
CAGGTATATATCCTGGTGTATTTTTCCCAAACTCTACCGGTGGATTAGAC
CCAAAGAAAAAAACATTGATGAAGGAGCTAAGAGAAAGGTTTGGATACAA
GTCCGCTCTGATCGGGAAATGGCATCTAGGAGTTGGAGAAAGTGGACAAT
ATTTGCCAACAGTATCCAAAAACTTTGATTCATACTACGGTAGGTAAAGG
GTTTATATAAAAGGGTGTGTCAAAAAATTTAGGTCTACTCTGGGCTTAAA
TTCTAATTTCTAGGATGAAATGCATTCATCAATAATAATTACTATACCTT
CAAACAATCATTCCGTTAATGAAACTGAATGAGGGTCTGATAGTGCCTTT
TAAAGTGAAATATATGACCTTTTAATTACTTAATTGTGACTATGAATTTT
CACTATTGTCAGTGGAATTTGCCGTTCCTCTAATTATTTTTTAATTATAA
AAAATAAGTATCAGAACAAAAAATGTAATCAAGCCTCAATTTGAAAAAAA
ATAAAAAAATTGAAGCTTTCTTTAATGTTGACTAAACATCTATGATGTTG
ACGCAGGGGCGTCTGAGGGATTATATATATATATTTTTTGTTCGTGGGGA
GTGGCTCTGTTTTTGGAGTTGTTTTTTTTCTAAAAAGGCNAAAAAATTTA
GTAAAAAATTTAACTTTAAATGTTAAATTTTTTTGGGACAGAAGGATCAA
AAATACAACTTTTTAAAAAAAAAATATATAAAAATTTAAGTATTATATTA
TCTAGTTTACATCCAAAATTCCTTAATTTGGTTGGGGACACACAGCCCCT
CCAATCCACCCCCTGCGGGCGCCCTTGCTATACCATAACGAGTTAAATTT
TGTATTTAAGGCATTCCATATGCGCATGATATGTGTCCCTGCAATGAATG
TTTTCCTAAAATGGGATGCCTAAGTAAATGTCATGATAAATTCGTAGCAT
GTCCTTTATTTGAAAACGATGTCATCAAGGAGCAGCCGGCTGATTTAACC
ACATTGACTCAAAGATACACAAATAAGGCAAAGGAATTTTTAAAATCCAA
CATAGATAATCCTTTCTTCCTGACATATGCCTTCCATCAACCACATCATC
CTCAATTTGCTGGTATGTACAACCGTTTTCCTAGTACCAGTTAGGTGCTT
ACCCATCTACTAGGTTCAAAGTTTACCAACTCTTCATTTCGTGGAGGAAT
TGGAGATGCATTAAATGAGATGGATGATGCTGTTGGGCAAATACTGGACT
CTCTAAAAGAATTAGGTCTCCGATCTAAAACACTGATCTTATTCACATCT
GATAACGGGTAAGTGAATAGATGATTTGAACTAACTAGCATTTTCGACCT
CAAATGATGATCATAGTCCAAGTTTACAACGACAAGAACGAGGAGGATGC
GCAGGACTTTTTCGATGTGGAAAAGGAACCACCTATGAAGGAGGAGTAAG
AGTTCCATTTTTTATGCATTGGGGCGGATTTGTTCATCCATGGACATCGC
ACACACTTATTACATCATTGGATATTTATCCAACCTTGATGAGCATGATA
AGCTATCAAAGTAAAAATTCAACTGATGGCTTTGATTTCTCTCATCATAT
ATTAAAACGGGATGCTAAATTTGTGAGTAAAAACAAGGGCTTCTCATTTC
GTTCATCATATATTGGGGGCGTCTGCAGAATAATTTTTTGTGAATAAAAA
TTCCAAAATTAAATTTTAAATATACAAAACTTTGAAATTTTACAGCTGTT
TCAATTATTTAAAAAAAACAGCTATTCAAAACAAACTTTAAAAATCCACA
ACAGTTCACAAAATTTAAATTTTAAATAATGGATGTTCTGGGGAAAAAAT
TGAAAAAAATCGATAGCTCTTTTCATAAAATTAATTTTTTTGGAAATGAA
TTACAAAACTGATCGTTCAAATATAAATTTTTTCGAAAAAAAAGTAATCA
AAAACCCCCATTTGGTCACTCAAAATTACATTTTTTGGAATTTTTTTCAA
AAAAAAAAATACAAAAATCCATAATTATTCGGGTAAATTTAAATTTTTAA
CTCTCTGAATAATTTGCCCAAATTACTTCTTTATAAGAAAATAAATTATT
TACAAAAAAAATCACTATTATTGCAAAAAAAATAATAATTTGTAGAACAT
TAAATGCAAGATTTCACGGTAAATATTGTTTTTCTCTCTAATTTCTGATG
GTTATTAAACCGCAAGAAATCCCAAAAGAGAAACCCTAATTCTTACTTAT
CTCAACTAAGAGTTTTAGTGATTTTAAACTATATAACTTTATTATTATAG
AACCCAAGAGAGTCCTTTCTTTACTTTCCGGGACATGTGGATCAAACTAT
CGGACCCTACGCTGTGAGATATAAAAATTACAAGGCCCATTTCTATACAG
AGGGTAATTATCTATAATTATATACGAGGGTCGATTGAAAAATCAGAGAG
ATGACACTACTGTCGCGTATCGAGGTTATTTTTAGTTAGTAGCATCTCTT
GGAAGATCATGCACGAACTTTCAGCCAGATCAGTCAATTTATGTCTGTTT
GGCATTCGTTTGAATCAAGAAATCGGTGGGAAATATTACCACAACTGGAA
TCGTAAGGAATCATCCTCGTCAAAAATATGGAAAGATGTATATTATTCAT
TGTCATTGGACCGTTCAAAAACTGAGCAGTAGAAAAGCACTCACAATTGA
CCCACAAACAAGCAGTTTTCCATCACGACAATGTATCAGCTCACACGTCA
GGAGATGTGGTTGCAAAATTAATAGAAATACGGTTCCAAATCGAGATGCC
GATAGCACTAGCAATCTCACACACCTTCACTCTTTTGTAACCCATAACTA
TATTATGGATTTTATCATATATGGCCACTCGGAAAATTTTGAAACCACAT
AAAAAGTCATTTGCTCGAAGGTGCAGTGTCCCAATAATGTTTATCAAGCT
TCTTTTTAGTTTCTTAAGGCGTTTTGCTTTTCATAAAGTAATATTTAATC
AGTATACAAAATTTTTTTTCATTCATTTTGTTTGAAAATCACTCCACTTC
CTCGGTAAACAGACATAAATATACTGATCAGGCTGAAAGTTTCTCTGTGT
TCTTCTAAGAGATGCTACAAAAACAACATAAACATTTATACGCACCAGGT
GTGCCATCTCCCGGACTTTGCACGCACTTTTCAAACGAGCTTGTATCTTA
ACAAAAACAGTTTGTCCTCAATTTAAAAAGATCCAACCTAACATTATTTT
TTACTCTTAGGTAACGAACTTTCAGACGGAAATAATTATGATTTTGCTTG
CACAACAAAAGCAAATAGAACATTACACAATCCCCCTTTACTCTTCGATC
TCAATCTGGATCCAGGTGAACGCTACCCTTTAGATCCAAATAAAAATCGA
GATCTTCTTCTTGAAATTCAATATGTAACTATGAATATCATGAAAACAAT
GACATGGGCAGATGGGGAAATGAAGAAACCAAATTCAAACAGTGCTCAAC
CCTGTGCTCAGAAAGGATGCAGGGACTTTCCGAGCTGTTGTAGCACAAAG
ACAAAGCTTCCTTTAATATCAATAATCCATAAATAAGAAATGTGTGTGCA
TACTCCTTGTATATTAAGTCTATTTATATATTGCAGTAGTAGAAAGGATT
GAATTTAAACTTTGGCTTCAAATCATGAGGAGTGTTATGCATCAAATGTT
AAATTTAAAAATAATATACCAACAATTACTAATATTGAAAATATATCACC
AGAGTTGATGATAAAAAAAGAAAATGAAATTAAAAGAATCACATTTTCTA
TCTATTTTTGTTTCATAAGATAATAAAAGACTATTCGTG

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