EMLSAT00000000737, EMLSAT00000000737-696584 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000737
Unique NameEMLSAT00000000737-696584
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1118supercontigLSalAtl2s1118:21547..22749 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000737 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000737EMLSAG00000000737-683503Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003179EMLSAE00000003179-712107Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769549auto769549Lepeophtheirus salmonispolypeptide
EMLSAP00000000737EMLSAP00000000737Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000737

>EMLSAP00000000737 ID=EMLSAP00000000737|Name=EMLSAP00000000737|organism=Lepeophtheirus salmonis|type=polypeptide|length=400bp
MWRNITFLLFQFIIPTIQVTLFCIAIGRDIKGLSMAXVNDDIVGKEXNGY
AKECYHQSIPFISFAGNDQPKNISCLFLQKVDXAIIDLVHYKEYKTAKDA
VIAGKHWGVIHFLNGFSDAFRWRLGALFQKEDVDIKKINTSYIYIDLDTT
NQQVMYSLKRSLYETFRSFSKELLTECYDIKNVEGYPAKYEKPIYGSINP
TFTEFMAPGIILSIAFFMAVGLTAQSFILERNDGLLERAWVAGVTSAENM
LAYMIAQFVVVIFQVTFAIVFLIYVFQIPSVGSLWLLGLLTTFQGVCGMS
LGLLISALCNHEQDAIQVALGLFYPTLLLSGIVWPIEGMPSSLKYVSYIF
PQTIACEAMRGILSRGWDPRWKVVFLGFVATTIWIFIFQILGALILRFKR
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mRNA from alignment at LSalAtl2s1118:21547..22749+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000737-696584 ID=EMLSAT00000000737-696584|Name=EMLSAT00000000737|organism=Lepeophtheirus salmonis|type=mRNA|length=1203bp|location=Sequence derived from alignment at LSalAtl2s1118:21547..22749+ (Lepeophtheirus salmonis)
ATGTGGAGAAATATTACATTTCTTCTATTTCAATTCATTATTCCCACGAT
TCAAGTCACACTCTTTTGCATTGCAATTGGTCGAGATATCAAAGGATTAA
GTATGGCTGKAGTAAATGATGACATTGTTGGTAAAGAAWGCAACGGATAT
GCAAAGGAATGCTATCATCAATCTATACCATTTATTTCTTTTGCTGGGAA
TGACCAACCAAAAAATATTAGTTGTCTTTTTTTGCAAAAAGTTGATRAAG
CCATAATTGATTTAGTACACTATAAAGAATATAAGACTGCCAAAGACGCA
GTAATTGCTGGAAAACATTGGGGAGTTATTCACTTTTTAAACGGATTTTC
AGATGCATTTCGTTGGAGATTAGGTGCCCTTTTTCAAAAGGAGGATGTGG
ATATAAAAAAAATCAATACTTCATACATATATATTGACTTGGATACAACT
AACCAGCAAGTCATGTATTCATTAAAAAGAAGTTTATACGAAACTTTCCG
TTCCTTCAGTAAAGAATTACTAACTGAATGTTACGACATTAAAAATGTAG
AAGGCTATCCAGCAAAATATGAAAAACCAATTTATGGATCAATAAACCCG
ACCTTCACTGAATTTATGGCACCTGGTATCATTTTGTCAATTGCATTCTT
TATGGCAGTAGGATTGACGGCACAGAGCTTTATTTTAGAGAGAAATGATG
GTCTTCTAGAAAGAGCGTGGGTCGCTGGTGTAACCTCAGCAGAAAATATG
TTGGCTTATATGATAGCCCAATTCGTTGTCGTGATTTTCCAAGTCACTTT
TGCCATAGTTTTCTTGATTTATGTTTTTCAGATACCATCTGTAGGTTCTT
TGTGGTTATTGGGTCTCTTAACCACTTTCCAAGGAGTTTGTGGTATGTCT
TTAGGTTTATTGATAAGTGCTCTTTGTAATCACGAACAAGATGCGATACA
AGTTGCTCTGGGGCTGTTCTATCCGACGTTACTATTATCTGGAATTGTTT
GGCCCATAGAGGGAATGCCTAGTAGTCTCAAATACGTCAGCTATATCTTT
CCTCAGACTATCGCTTGTGAAGCAATGAGAGGAATTCTCTCGAGGGGATG
GGACCCAAGATGGAAAGTAGTTTTTCTAGGATTTGTTGCAACAACCATTT
GGATATTCATTTTCCAAATTCTGGGTGCGTTAATCCTTCGTTTTAAAAGA
TAA
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