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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1123 | supercontig | LSalAtl2s1123:149946..156311 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000771 >EMLSAP00000000771 ID=EMLSAP00000000771|Name=EMLSAP00000000771|organism=Lepeophtheirus salmonis|type=polypeptide|length=348bp
MTFTKTSQKFGQWSDVRANTVYGLGFSSEAELNKFIEKFHEVKEATRATK
PNGTXPTTSASASPVATRSNANDNIVLSTPQGTQSSTVVNSDIYHQNQNE
VTNSNILKSQLVAHQRSQSLSGLQQQPQDSPKKVIGAAEKIPTQLTSNPP
LTGEAQLKYENDRLKLALAQSSANAKKWEIELSTLKSNNARLTSALQEST
ANVEEWKRQLHSFKEENSRLKFSLIEYEAGRGNCDFNALAELRNLKTRIE
ELETDLRERDDEVKNLKDQINILETSNQEEDSELLKNLQIDNDALKKTLD
KVQSQLDTSLDAQEQQRKVLDSINRQFGDTLLSMTQLHNELTAVLKTT back to topmRNA from alignment at LSalAtl2s1123:149946..156311+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000771-696618 ID=EMLSAT00000000771-696618|Name=EMLSAT00000000771|organism=Lepeophtheirus salmonis|type=mRNA|length=6366bp|location=Sequence derived from alignment at LSalAtl2s1123:149946..156311+ (Lepeophtheirus salmonis)
ATGTGCCACTCTGTACATAATCTTATTTTATATTGATTATTTGATGATAT
CATTGAAGGTCATTTATTATGAATAATATTGCATATAAGACTTATAATAA
TTTCTTCTTTTTTTTCTAATATAATATATAGGCTGMTATAAATTCGACCA
TAACTCCTAACATGACATTTACCAAGACTTCGCAAAAATTTGGTCAATGG
TCGGACGTTCGGGCTAACACTGTGTATGGCCTTGGATTCTCATCAGAGGC
TGAATTGAACAAGGTATTACTTCTCTCTCTCCCCTCKCCCCCCCCCCTAA
ATTAAGGATTCACTTGTCTTTAAATGTTAACGTTCCATCCTAAATATTAA
GCACGCGTCTGAATCGGACGCAAAAGCTGTCCTATAGAACAAACTTTGTA
AAGCTGAGCCGATCATCTATACAAATTTCATTATGTTGGAGATATATCAC
GGCGTTACAGCAATAATATAAAAATATAGACTGTATCTTATTGTCAGCTA
TCGATTTTTCTCATCCCCCTTCATCCTTCACGTTGATTGGTTGAATTCAA
ATTAACTCTTGTTAAACTGTGAAGCATTGCCAAAAATTATAATTGAATAA
TAATTCCATAGTACGGAAGAATTGGCTAACCACCAATGGATCATGGGGGT
TTTTCTTTCTTTTTAGAGTAAAGAAAGTTAACGACGTGATAAACATCCTA
TCTTTTATAATAATGCATTTAAGCTGTGTTCTTATATGTATGATAATGAA
TTACGCTTAAAGTTTTACTGAACGAATTCATTTAATACACTTTAGTGATT
TATTGCAATTTAAATGAAAATAATGCTCTGAAGAGGGCGTTTTAAAATTT
GGGAATTTCCAAGGACTTATTTTAAGTCCCATAATAATGACCCCAATATA
ACCCCCTAACTTCAATACGAAAGATAAACTACTTCTTCTTATCCATAATA
TATTTCTTCTTTTTTCCTAGTTCATAGAGAAATTCCATGAAGTGAAAGAG
GCTACAAGAGCAACCAAGCCTAACGGAACAKCCCCAACCACATCCGCTTC
AGCATCTCCTGTTGCTACTCGCTCTAACGCTAACGATAACATAGTTCTAA
GTACTCCACAAGGAACTCAATCGTCAACAGTAGTCAACTCAGATATCTAT
CATCAAAATCAAAACGAAGTAACCAACTCAAATATCTTAAAATCGCAATT
AGTAGCTCATCAAAGGAGTCAGTCTCTATCTGGTCTACAACAAGTATGTC
TTATATTTTATGTACATCCCTATTTCGTTATCAGGACACCTATCCCGAGG
GCCAATTTTAGGTAGGGTATATATCTCATAACTGGGGGCCCGTGCTGGAG
ACTATTATATAAAAATTTAAATGTATCGACTATACAGAACTAACTTCTTT
AAAGGACCAAATTAATTTGGTCCACTAAAAATCATATTTGTCTCTGAACG
GTCTAGGATTTTCAAACTGAAAAACAACACCAGTATCTGTAACAAACTTT
AAACACTTTTTAATAAATTTGTGAATATTCAAACTTTTTGAAAAATTATA
GTCTTAAATTTTTTGGAATATACAAAATTTGCTTTTTTTCTTAGAAAATT
TTGATCGTTAAATTTTTTTAGTCAAGTTGATAACTTCTTGACTTTTTTCG
AGAAATAAGTAATTAAAAAAACAAGAACAAAAAAAACAACGACACAATTT
CGAATTAATCTAAATATCAAAATTGAGGCAACAATCAAAATATAATAGCA
TTTTTTTTCGTACTCATGAATTTGAGACCAAGATTTTAGTCAGAGGAGTG
TAACAGGGTATAACGGCATTGAACCAATTAACGCCTATTGTGATAATATG
ATGAGGGTCATTTTTTATTCCAGCGGTTACCAACCTCTCTGGTGCCGTGC
CCCTTGATAACATTTGCAGAGTTGCGGTGATCCCAAGGATAACATTAGTT
GGGTTAATCTCCGTCGCTTGAAGCTACCTAGAACAAGGTAATATATTAAA
TTTGATTTATTATTCAATTTATGAACATATTCAGCTCCAAGCATAACTCA
AATAATGTCTTTGGTTGCTGGAAGCATCATCTTATCAGTAGTGGTGTGAG
GTTTCTTGGCTTTGGTGATTGTGAGAGCCACCAATTATGATGCATCAAMG
GCTGCCATATTTTGTTATTGGTAACCTGTTTTTAACACCACCAGCTTTAT
TCTTAAACTACTTGGTGCCCCTGGCCGCAAAGTTAGGATTTTTAGCGTTT
TATTATGTTGGACATCATTGATTCGGCTGACGTAATTTTGTTACAAATTA
CACATTGTACCTTTTCAATTCCTGCTCAAATATGAAAGAAAGACCTACTC
TAAAAATTTCCTCACTATTTTTTCTTTTCCTAATGCTTGTCTCTCAATTC
ATCATGGGCAATCTGAAATTTTTCTTAATAAATTTTAGTTTAGTTGACTA
TTATAGTTAGAGAATATTGATACCAACGCGAGAATACAACACAAGAACAT
TCGGTATCATAAAAGAACTCTTTAGAAGGCCTTAGGCAACCCCAGGAAAA
TTGTCAGGAGAATACATTTTGGGTTGCCACCCACAGGTTGGGAACCTCTA
TTCGATTCACTTCAATCAATGCCAGATTAAATTAATTCACATTCGTGTAT
TTGTGAAAAATTTCAACAATTTGTAATAATATCTTCTTTCGTTGTTAATA
TTAATTTTCCCCTACTTTTTTGAAAAATAGAGGATGCCTCATTCCAGACC
TAAGGTTGAATTATCCACAAATTTTTACCAAATTAACTGAAAAGCATTTG
GAATACTCTTCTGTTCCTGCATTTTAATATGAAAACAGCCTTTTTCTCGA
CCAAAGGACGTCAATTTTCAGGGGAAATATTTTCTCTCTGATTTACATCC
ATAATATCTGAATGGTAAAGTTTCATAGAAAAACTTGTAAACAATATTTC
TCTCCGTTAATGGGTTAACTAGAAAGAACAAATTGCCGTATCGGTATTAA
AATGTCTCTAGGGGTAGTTGTCCTAAAATACCTTCTTTTATTTTTATATC
CATATCTCTTTCTTTAGCAACCACAAGATAGTCCAAAGAAAGTCATTGGG
GCAGCTGAAAAGATTCCTACACAACTAACATCTAATCCCCCTCTAACGGG
AGAAGCTCAACTCAAGTATGAAAACGATCGGTTGAAGCTTGCTTTGGCTC
AAAGGTATAGTCAATTATATTTACTTAATTATTTGACTAAAGTACTTTAC
ACGATTTATGTAGTTCGGCAAATGCCAAAAAGTGGGAAATTGAGCTCTCT
ACTCTCAAGAGCAATAATGCTCGATTAACGTCAGCACTTCAAGAATCAAC
AGCTAATGTCGAAGAGTGGAAAAGACAGCTTCATTCTTTTAAAGAAGAAA
ATTCAAGACTGAAATTTTCTCTGATAGAATATGAAGCAGGAAGAGGTTTG
TAGTATTTCAGTACAAAAATTAGAGATTTTGATTCCCATAATTTATATTT
CCTCAATCTGTTTTTCCAAAAATTCAATAACATTTTTCTATACATATTTA
TTTGCTATCGCAGTGACTCCCAAAGTGAGCTTTTTGTTTCCCACGTAAAT
TTACAGTTCAGAAACACTGTTATTTGAAAATTTAACCACAGATTCAGTCA
ATTCATGACTATTTGAAATTTGATATATACCATAGTTTAAAAAAAATGTG
TTCTATACATAGTGAACCCTAATCATCTTTTAGAAAAAAAAAAAACTTTG
GAGTTAGCGGATGATAACCTACACGGTTACTTACAATTTTATGAAATTCT
GAGGGTGTATGCGGAAAAGTTTCCTAAAAATAGGAATGACCCATACATAA
AAAAAATATTAATACAGATTTTTGTTATTTGTTGCTATGATAAAATTTCG
AATATAGCATATGTTTACTTGTTACAGGCAATTGTGATTTTAATGCTTTG
GCAGAACTACGGAATCTAAAAACTAGAATAGAAGAATTAGAAACTGATCT
GCGAGAGCGAGATGATGAAGTCAAGAATCTGAAAGATCAAATCAATATCC
TAGAGACGTCTAATCAAGAAGAGGACTCTGAGTTACTCAAGGTTAGATCA
TTGCCTACTTAAAATAAGACAATGAAATTTGTATTTATAAGAACATATTT
TTTTATTAATGGATATAAACTTCATTGGTATATGTATATCATTGAAACAT
ACTAAAGATACAGGACAATGCAATAAAATTCCTGATTACGATGCTAATGA
TCCGTATAATGATCTCTAAAGAGGGTTAATTACCCGTAAACTTAAGTTAA
CTCTTCTACAATCAAAAATAAAAGAGAAGAATTTATGCAATAATATATTA
TTATTATTTCATCGTTCGATGATGAAATTATTACATGTGTGGTCCGTCAA
CACAAAAGCAAGCTCGAATGTTTTTTCTCAAAATTGAGTCTGAATTATTA
AGCCTTTGGAGGCGCAGCAAATTGTACTTTAAGTCAGCAAAATTGATTAT
GACATTAAAAGATTAAGAAATGGATTTATTTTGTTTAAAACGGGTCATAT
CCGGGCCAATATAAGTCTCTTTAATCAAATAAAAGTTTTTAAACTATATC
TAAAATTCTTGGGTATCTTAACTCATCCTACAAATTTAAATACAGAGCTT
ATAATTGACTTAAATATATCTATGCCATATTGGCCTATATAGATAGATAT
ATATATCAAAAATAAATTGTAATTTTTTTCATTTTCTTTATTTTTATTCA
AGATTGTTTTTGTGTTTACGCACCAAAAGTCCTGCCCTGACACACTTATT
ATTATTATTCATATTTTTTCCATTTTTTTCAAATATTTTGACAATTTCAG
AAGAAATGTTTATGCGGCTGTTGTTTGATGGAGGAGAGMAAGATTAAAAT
ATTCGGAGTAATTAATATATTATTTAATTTCTATCAAGTAGCTTGCATAT
TTATACATAGTATGTATTATTCGTTCAACGCACAGGGCAGTTTGATTTGT
TCCGTCACATAATATTATGTAGCCTTATTTTATAAAAGAATGTTCATATT
CACAAGTTTTAATTTCATTTTGTATATTTATAATTCATAGAATCTTCAAA
TTGATAACGATGCCCTCAAGAAAACACTAGACAAGGTTCAATCTCAATTA
GATACTTCATTAGACGCTCAAGAGCAACAGAGGAAAGTCTTGGATTCCAT
CAATCGACAATTTGGGGATACACTTCTCTCAATGACTCAACTTCATAATG
AGTTGACTGCTGTACTTAAAACAACTTAATGTGTAATTGATCATGATTGA
TGAACAGTAATCAATTCCTTTTCCCCGATCACATCACCCCTTCCCTAAGC
CCTCATTTCCTGCTCTTCCTGTTCTCCTTTGTGCGTGTGGGCTTCCTTAT
ATTATCAGGGTCTCACGCACAATCTATTCTCTCAGAATATATGATTAATA
TTGAGGGTAGGCTGCTTATAATTTTAACTTTTTAATTTGTTTAACTTAAA
GGCTTTATATATACTGATTGGGATATCCTTCTATATTATATATAAATACA
CCATTTTTTAATTTTGGAAAAAATTCTTTATTTGCTATCTACTCTATCCC
TCATGAACCAATTACAATTTCCAAATGGTATACTCCTATTTAACGTATTT
TGATTGCATTTACTACAAATATTAATAATTATTCGAAGGCAGTCCTCCCA
TGATCTCCACCACCACGTTACATGATATGTATTATATATGAGGAAGGGCT
TTTGACAAATTAAAGAGTCATTTGTGTTTTTCGTCCTGGTTCTGTTATTT
TTCGTAAAAAGGATGCTCGTAGTTGTACTTTGAATGTAAATTTATATATA
ATATATGAATCTGTGGAGATCCGCCCACCGTTCATCCCATCAAAGCATGA
CGGTGTAAGCAGCCTGGCATGATAATTAAAAAAAAAACATATTTGAATTT
TTTTTTATCATTCTACTAAATTAATTAATTATTTGTGTATAATGAATGAT
AATTATTAATACGTAATTTCATTTATATTCAAACAAATATCTTTTAATAT
TTTTTTTGTCAGATATTTTTTTAGAAAAAAAACTTTTTTGTAACCTACCT
ATTTTCTGATTCTTTAATTCACCCCTTTCTTCTGTTGTTACAGCGATATC
ATTTTTATATAATTTTTAAATAAAATAATATATTGTTGCGCCTTTTTGTC
ATAAGTTTTTTTTTATATATAAAAAAATTAGAATTGAATCTCAAGAGGAA
ATTGATATTTATTAATGATACATGTAATTGAAAATTGATTGCAATATTAC
TCCTAGTCTTGAAGTAGACATGAAATAATGATCATGAGTTTCAGAAATAG
AGGACCCCTCTCCGCC back to top
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