EMLSAT00000000796, EMLSAT00000000796-696643 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000796
Unique NameEMLSAT00000000796-696643
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s11344supercontigLSalAtl2s11344:74..1279 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000796 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000796EMLSAG00000000796-683562Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003500EMLSAE00000003500-712428Lepeophtheirus salmonisexon
EMLSAE00000003501EMLSAE00000003501-712429Lepeophtheirus salmonisexon
EMLSAE00000003502EMLSAE00000003502-712430Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767910auto767910Lepeophtheirus salmonispolypeptide
EMLSAP00000000796EMLSAP00000000796Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000796

>EMLSAP00000000796 ID=EMLSAP00000000796|Name=EMLSAP00000000796|organism=Lepeophtheirus salmonis|type=polypeptide|length=303bp
SDEEEENKFYYSSEEEEKGGIRSPHYKNHPQNNFLFNARRDLLLYSVFPS
EAFEPQSLPQDLRIPSKKRDSDCISITSTSSSSSICESSISTDGSGCNSN
KSKVGLQCPDCGKSYSTSSNLARHRQTHRSIEDKKARKCPHCDKXYVSMP
AYSMHIRTHNQGCKCPFCGKCFSRPWLLQGHIRTHTGEKPFTCNICEKAF
ADKSNLRAHIQTHSNTKPYVCSKCNKAFALKSYLYKHEESSCMKVNRKGT
KVRNNEGPKVTTDVNISDLSPPPSSPPPSLPPQQMFLETWRQVALLSNKE
SRN
back to top

mRNA from alignment at LSalAtl2s11344:74..1279+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000796-696643 ID=EMLSAT00000000796-696643|Name=EMLSAT00000000796|organism=Lepeophtheirus salmonis|type=mRNA|length=1206bp|location=Sequence derived from alignment at LSalAtl2s11344:74..1279+ (Lepeophtheirus salmonis)
TCAGATGAAGAGGAAGAGAATAAATTCTATTACTCCTCCGAAGAAGAAGA
GAAAGGGGGAATAAGAAGCCCTCATTACAAAAATCATCCTCAGAACAATT
TTTTATTTAACGCGCGAAGAGATCTCCTTCTTTACTCTGTATTCCCTTCA
GAGGCATTTGAACCTCAGAGCCTTCCACAAGATCTCCGAATACCATCAAA
GAAAAGGGACTCTGACTGTATATCTATCACTTCAACATCATCAAGTAGTA
GCATCTGTGAATCCTCCATTTCCACGGATGGTAGTGGTTGTAACAGTAAC
AAGTCCAAAGTAGGACTTCAATGTCCAGACTGTGGAAAGTCTTACAGTAC
TTCGAGTAATCTTGCAAGACATCGACAAACCCATAGGTAAGGACGAAAAT
AAATCTTTAAAAAACACCTTTCCTAAATTAATAAACAAATGTAGTCAGTC
CACTAATCCTCTGATCCTTCTTTAGATCTATCGAAGACAAGAAAGCTCGA
AAATGTCCTCATTGCGACAAGMCCTACGTCTCCATGCCAGCGTATTCTAT
GCATATCCGAACTCATAATCAGGGATGCAAATGCCCCTTTTGTGGAAAAT
GTTTTTCCCGTCCATGGCTTCTCCAAGGGCACATCCGTACCCATACAGGT
AAGACTCAACTCCACTCCTCATGCCATAATTTACAAACCTAAATATCTTC
ATTCACACATCAATAGGGGAAAAACCATTCACTTGCAACATCTGCGAAAA
AGCATTTGCTGACAAATCCAATCTCCGGGCTCACATCCAAACCCACTCCA
ATACAAAACCCTATGTCTGCTCCAAATGTAACAAGGCCTTTGCTCTCAAA
TCCTACTTGTACAAGCATGAAGAGTCTAGCTGCATGAAAGTAAATCGTAA
AGGAACGAAAGTACGGAATAACGAAGGGCCTAAAGTAACTACTGATGTGA
ACATCAGTGATCTATCCCCCCCTCCTTCTTCCCCTCCTCCGTCTCTCCCA
CCCCAACAAATGTTTCTTGAAACATGGAGGCAAGTGGCACTCCTGAGTAA
TAAAGAGAGTCGAAACTAATCCATCCAATTGCCTTATTACGTATATATTT
ATCACATTATTATGTACATATATTTTTGTAAAAAAATATTGTTGAAACAA
CATAAAACAGCGGTTCTGTTCTAGTCCTTTAACTATTAATATCCCCCCCC
CCACTC
back to top
Add to Basket