EMLSAT00000000798, EMLSAT00000000798-696645 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000798
Unique NameEMLSAT00000000798-696645
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1136supercontigLSalAtl2s1136:123672..124423 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000798 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000798EMLSAG00000000798-683564Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003506EMLSAE00000003506-712434Lepeophtheirus salmonisexon
EMLSAE00000003507EMLSAE00000003507-712435Lepeophtheirus salmonisexon
EMLSAE00000003508EMLSAE00000003508-712436Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772714auto772714Lepeophtheirus salmonispolypeptide
EMLSAP00000000798EMLSAP00000000798Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000798

>EMLSAP00000000798 ID=EMLSAP00000000798|Name=EMLSAP00000000798|organism=Lepeophtheirus salmonis|type=polypeptide|length=96bp
MVHADDGEILNLTILKIRILNVCLVEVFPFKETRFVTNMTEGLVMRAVIT
LFSKKDKKCSNGAESKDPPSRQIAQPSSISSQWRXLRPLGASFLRK
back to top

mRNA from alignment at LSalAtl2s1136:123672..124423-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000798-696645 ID=EMLSAT00000000798-696645|Name=EMLSAT00000000798|organism=Lepeophtheirus salmonis|type=mRNA|length=752bp|location=Sequence derived from alignment at LSalAtl2s1136:123672..124423- (Lepeophtheirus salmonis)
ATGGTCCATGCCGATGATGGAGAGATTTTAAATCTCACTATCCTCAAAAT
ACGAATTTTAAACGTGTGTTTAGTTGAAGTTTTCCCTTTTAAAGAGACTC
GTTTTGTAACGAATATGACTGGTTAAAAAATAATTAAATTGTGGTGTTAA
TTCATTTCAAGTTGAGTGTTATGAGAGTATACAACAAGAATTCTGTCTTA
TTTTGCCTACAATTAGTCTATTTGTAAAGATTTTCGAACAATACCTTAAA
GCAGATCAAATATTGGATTATATTTTCATAGTTACTTTGAGCTCATAACT
TATACATGTGTTAACATAGAAACTAAATGTGATATATGTACTTTTAGAAG
GATTAGTCATGCGAGCTGTCATCACATTATTTTCAAAGAAGGACAAGAAA
TGCTCAAACGGAGCAGAATCGAAGGATCCTCCCTCCCGCCAGATTGCACA
AGTGAGTTCATTGTCCTATCATTTAAAATTGCTGTTTAACAACTGAATAA
AATTTAGATCCTTCTTGCAATTGCTTGTGCMCTCCTTAKGGGGAKGGAGG
GGCTCATGMCCTCWTTTSCAGCCGCTACGTTGCCGCACTTAGCACAAGAG
TTTAACATCGATCCATTAAATCCATGGCTACGTAAGGAATTTTTTATGTC
AATGTGTTTAATTAAATAATAATTTATATTTAATAGCCTTCATCTATTTC
ATCTCAATGGCGGKCTTTACGCCCATTGGGGGCTTCATTTCTWAGAAAAT
AG
back to top
Add to Basket