EMLSAT00000000931, EMLSAT00000000931-696778 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000931
Unique Name	EMLSAT00000000931-696778
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1162	supercontig	LSalAtl2s1162:154855..166892 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000931 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000931	EMLSAG00000000931-683697	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000004087	EMLSAE00000004087-713015	Lepeophtheirus salmonis	exon
EMLSAE00000004088	EMLSAE00000004088-713016	Lepeophtheirus salmonis	exon
EMLSAE00000004089	EMLSAE00000004089-713017	Lepeophtheirus salmonis	exon
EMLSAE00000004090	EMLSAE00000004090-713018	Lepeophtheirus salmonis	exon
EMLSAE00000004091	EMLSAE00000004091-713019	Lepeophtheirus salmonis	exon
EMLSAE00000004092	EMLSAE00000004092-713020	Lepeophtheirus salmonis	exon
EMLSAE00000004093	EMLSAE00000004093-713021	Lepeophtheirus salmonis	exon
EMLSAE00000004094	EMLSAE00000004094-713022	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto773429	auto773429	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000931	EMLSAP00000000931	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1162:154855..166892+

protein sequence of EMLSAP00000000931

>EMLSAP00000000931 ID=EMLSAP00000000931|Name=EMLSAP00000000931|organism=Lepeophtheirus salmonis|type=polypeptide|length=171bp
MSLPRVFFDMGADGKPLGRIIMELRSDVVPKTAENFRALCTGEKGFGFKN
STFHRVIPNFMCQGGDFTAHNGTGGKSIYGSKFEDENFTLRHTGPGILSM
ANAGPNTNGSQFFICTAKTTWLNNKHVVFGQVVQGMEVVKAVESYGSQSG
KCSARIVVQNCGXGLIGPHCT

mRNA from alignment at LSalAtl2s1162:154855..166892+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000931-696778 ID=EMLSAT00000000931-696778|Name=EMLSAT00000000931|organism=Lepeophtheirus salmonis|type=mRNA|length=12038bp|location=Sequence derived from alignment at LSalAtl2s1162:154855..166892+ (Lepeophtheirus salmonis)
GAGAGAAGAAAAGAGGGACAGAGAGGGTTTAGAAAAGACTCTGATGTGAG
AAGCAGTTGCATGGAAATTGTGATTGGAAGAGGAAAGAGATTGGAGTGGA
TTAAAGATGAGTTTGCCGAGAGTGTTTTTTGATATGGGTGCTGATGGGAA
ACCGTTGGGGCGTATAATAATGGAGGTAAGTAGTGTGAGCGTGGAGGGAG
TGGATGGMGATTGTTGTGTTTTAGCTTCGTTCGGATGTGGTGCCCAAGAC
AGCGGAGAACTTCCGTGCCCTGTGCACTGGTGAAAAGGGATTTGGTTTCA
AGAATTCTACCTTTCATCGAGTGATCCCCAACTTCATGTGCCAAGGAGGA
GATTTCACGGCGCACAACGGGACTGGAGGGAAATCCATCTATGGTTCCAA
GTTCGAGGATGAGAATTTTACTCTGCGACACACCGGACCCGGTAAGTTGA
TTCCATGTCTGGCCACATGTGTTAGAAATACTGTTTATTGTTAAGGTATC
CTCTCCATGGCCAACGCGGGCCCCAACACCAATGGATCTCAATTCTTCAT
TTGTACGGCGAAAACAACGTGGCTCAACAATAAGCACGTCGTGTTTGGAC
AAGTAGTCCAAGGGATGGAAGTGGTGAAAGCTGTGAGTGTTCCTTCCCCK
CCCTTTACACTCYTCTCCTTTTAACTTGTTCGTTTGCCTCATTTAGGTGG
AGTCCTACGGATCACAATCTGGGAAATGTTCTGCTCGGATCGTAGTTCAA
AATTGTGGTCNAGGTTTAATTGGGCCTCATTGCACATGAAGCGTTGTAAA
ACTTTATCAATTTAGAATACATCTTCCCTATTTTTTGTACTTGCGTTACT
ATCAATATTGTAGCTTCAGTATTGCTTAATACCTTTAATAACAGTTCTAT
AAGGCCTTCAAAGGATTGGGAATTATGAGGGTATTTTTTATTTGAAATTA
AACGGTTTTTTAAGGAGAGTCAGTGTGTCGACAAATATCTATTCAGATTA
TCATTTCTGTGTTATTTTGAGGTGTGATCAACAAATTTAATTAATGAGAG
ATGGAAAAGTGGTTAATTTGGGTTGTGTGCCAGCTCTGGAATCACTAGCA
TGATCATTCAACTTTTTTATTGTAACTTAAGTAAGTAGTGTTTTTAGACA
GTAAGCATGTTGCTTGGGGAAATGTTTACTTACGCAAATCTATCCGTACT
TGCATTCCAGGTATACTTTCTCATTTCATGAGTAACAAGTTAATGTTACT
TGTTTTATTACATCGTTCAGATTTGTAATCCTTAGTTGTCGATGTTAGAT
ATGAGCGTAGATAGTTTTCACAGACAATTAATTACTTCATAAGTTTTCAT
CTTGTGCTAGGTTAATATCTTCACTGCATAAGATTAATGAACTTTAAATA
AATCTTAACTTCCATCAAATGGCTATTAAAAAACGCCATTAATAACTTTA
GATTACAGACTGCCTAAGTGACGGTTTCTGATCAAGGCAGAAATTAAATA
ATTAATTAAAGATTGCTATACATTTCAGTGTAACTAGTTAATATAATTAG
ATATATTCTAGCATGCAGCCCAGGCTGTTTTCTCTTTTTAGCCTCGTGTA
AGAAAGTAGTATATAATGACGTTGCCACCAAACTTTACCCATATAATATA
TGGATATTCTCTTTCTACGGAGGTTCTCCTATAATTTAGCTACTTTTATG
GTTATTATCACCGTTGTGGTGCCATTAACTACTTCTAAAATTAGTATAGA
GTCAAAGAACCCATTTTTATAGGTTTTCAAGAGTCCTATTTTTTACTCCT
CTTAGAAAGGGAATAATTTTCTCATAATGACAAATTTTGTTTTAAGTGTA
TTCTTCTGAAAGCTCGTTATTGGACTACCAAACAAAACCAAAAAATGTAA
TTTTACTAAATTTTCAGGGAAAATTGCATCTGTTACAACCCAGTTGAAAT
GTATGTTTTTGTAAAACATAACAAGTTTGTATGTTAATACTAATCCCTTT
TTTGTTTTAAATACGTATAACACAATACATGAGGCGATTTCTAGACAATT
AATTCTACCAATATCTGGAGTGAATCAGTTTATCTTATTGTGGAAGGTGT
GCATTTTTAATGGTTATAAATCAAATAGCTTTATTTTTATTTAACAGCGT
CTGAAAATCTGTGAAGTCACGTACACCAANNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNAGTTAGTTTCATGGTTTCACATTTACCTATCTTGTTGATGT
TAATGAAACTTATTAACCTTGGTTCTTATTTGGCGATTTTTTTCTAATAC
ACTTATAATTTATTATTAAATAATTATTGAAATTTTTTAATAGTGAATTA
AATTTGAAGAAGTAAATCCTAGAAAGTATTTATTTTAGATGTTCCCCCAT
CATTTGGTTAAGGTTGAATTGAATTGCTATTATTTTAGATATAAAAACAA
TGCCTCATTTTTGAAATACTGAATAAAATTTTGTGTAATAATACTTATTA
AAATAATTGCATATATTAAATAAAAAGCATACTGGAGTTGTGACTTAAAA
ATATCATAAAATTCCCTGCGTAATATGCAATAAATAATTGCAGTGTTATT
ATATAGTTTTTTAATATAATTTTGGTTTATCATATATACAAAATACTGTA
ATGTGTACATTCCATACTTAAATTAAAATATTGAAGAATACTTCTAATGA
TGAATATCTTAGAATCAGCCCTTCAAAAACACAGAGTTAATTAATAATAT
TCAGTGGAAAAATGAAAATGGTACACACAATACTATCTATTATAATATTA
ATCATCATTCACCCCTTCCATCTTATGGAGTTGCATAAAACGACAGAATA
ATCGACTCAATGATCCAGTGAGGAACATGTATAGTTCTCATCCTCTATCT
ACCACTAATTAATTAAAGTTTTTGAGTCCTTTTCACTTTAAGTCTACTGT
TCGTTATCTACATACTTAAAGAAATCTATTTCATTTATAAGTGTCCTTGA
TGAATATAATCATGCTGAAAGGTATGACCTATTTGGATAATTAAATAGCC
TCTATTTCTTAATTACTTGTGAGTCTCTTTTGTGATTGGCAAACAACTGG
AAGATTATGAGATAATGTGTCTCTCTTTTCTGGTGGTTTGTGTATGCAAA
GCATATTCTCTTCTGATATTGCATATAAATCGTTATTGGGAAATGTTAAG
TGATAATGAGTTTTAAAAAATATAAGTAACTTAACTTATGTAGATTTCTA
TTGGAATATTCGAATTTCTTCGCAATTCCTAAACGTATTGACTCATGAGT
CATCTTATAAACAGGTAATTTGCTTGTTAGCTTATTGGAATATTACTATC
TTGGACCTGTACAATAATAAAAAAATKCCAAACGTATACCATACGAGCTA
ATAATAAGTTGTTTTATTGAAAACGATAGTTAAAATTAATCAACATATAA
TTCGATTGTTTGAGTATTAGTTTAACAAATACAAATAATTGTAAAATCAA
CTATTCTTCTACATTTAAATTCTCTATAAGTGAATTCTCCATTTTTTTAT
CTTATTGATTCATTCGGTTTTATTTTGGACGTGCAAATGCTATTTCGTTA
CTGAAATTCTTTTCAGACGAGTAAAAATTTCAAAATCCTTTTTATTATTA
GTTGAATAACTACTGTATTCGTTCTTTAAAAAATGATAAAGTGTAGTTTA
TGTAAATTAGCACTTTTTAACATAGTTGGTGARCCCTGTACAAACACAAC
CGAGTCTAAGATAAGTCTAAGTCATGATGCCTCAAAGACATCCGATAAGT
AATCATGCTCATAAAAAAATTGATTGAGAGAGGCATGGAGTGATGGAGAC
GAATTCACAAATACTTCCTTGAACTAAGGTGGTTATAACTCATAGTAGGC
AAGGTTAATAGAAATACAAGGTTTGACCATCATGTAATTGGGCTTGCTAG
AATTTTCAATTTGATGTATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNAGTATTTTAAACAATGATACCATATGTCTTTGTTTTCCCCTTCTC
CTTGCACGCGTTTTTCTCTACAATATTATCAACTATAGTTATAAGCATAC
ACATCAAAAGTCAACAGCTTTCTTACCTCTTGTTTAGAGCCTTGGCATGG
GTCTGACTTCTTTAAGACTCACAGATGAAATCAGAGTTGTTAAAATGCTG
GAAAAACAGCTTTGTACTTTTGGATGATGTCTAATCTGTCTTCTTCAGAT
CTGTTTCTCTTTGAACGGCTCTCAGTCAAGCAGTATCAAGTCTGGAGTTT
CTCTCTTTGTTTGGCCACAGATGGATCAACACTAGACTCTTGTGACTTGT
TGTCATAGCCCGTTCTAGACAACACTCAGTGAGCTTGATCGGAATTACAA
AACACAATAAAGATGGCGTCCACAAAGTAACTAATAGATAATAACTTATT
ATTCTACCAAACACGTTGCAACACTATTTTTCAATAAACCTATATTGCAC
GCATATTTGAATTCATGTCATCTCCTGCTTACAGGAGTCCTTGACATTTT
ACAGTATATATATTATTACTAACTGATTATTATTATTACTATAATAATAC
CTATTTGCCATTCCAAAAAAGGTACAATGTATTGGAACAATAAAACTGTC
AGTTGTGCAATTGCCATTTGTAATTCTCTTAACTACATAATTTATCATCA
TTTTCCAAAGTATGCCTCAAGGAGGAAAAATTGGGAAAGAGCTTGTCATC
GAAAGGACCACTAAAGAAAATACCCGAAAATTTGTGAAAGTTATTTTGAG
GAAAATGCTTATAAAAAGGATTTAAAAGGTGAATTGCTGATACTACTTTT
AAAAAGAAAATTGAAAGATTTTATCCTTTCTAGATGTCTCATACCTGGAG
AAGGATTTGTGCAAACTCCAAGGGAAATAAAATGAACTAAGATAGTGGAC
CATTTTGAAGAAGGTTCTAATGAAATATATTTGAAGACATTAGTCAAATC
ATCCCAAACCAACGTTAAATCAACTAAAACACTTGTGTTAGGAAAGTTTA
ACGCATCTAATCAAGCATATGTATCCCGGATTATACAAACTATTAGGGCT
CCTAATACAAGAAAAGATCCACTCATTCATTAGCTCGGGTCACTTAGGAA
ACAGAATGGAGATTTACACGAAAAAGGGGAAATCCTTCAATTGGAAAATA
GATAATTAAAATCCCAAATCTAATTTTAAGGAAGCGATGAAAGGAGAACT
GGAAAAGAGATTTACTAAATCTCAATGTAAACTCATTATCAGTGTGAAAG
GTTAAGAAAATGGATAGAAGAGGATTTTACTAACGGACTGATACTGAAGT
CTCCTCAAAAGCCTACCGTTACATTCAATCCAATGGTCTACCTCCAGTTC
CTAGTGTAACAACCCTCAAATGGTGGATCCGAAATTTTTAAACAGTTCCT
GGAATACAATCAAATATTATTAAAATTATTGCTCAACAAATGAAATCCAA
CGAAACTCCGAAGGGAAACTTACCTTGCTTGTATTTTGATTAGATGAAGC
TCCGACCAATATTAAAAAAGGACTTAAGATGTGCCTATGGAGTAAATTTG
GATGTAAAAAAAGGATATTCTCCAAAGCATAGTAAATGTGATTGGAACAA
TGAAACAAATTAAGAAAAATAAATATGGTGAAGTGGTGTTGCCTGGGTCA
TCTGCTTGGAAGCCCTGTCAAAAGGGCATAATTATTTCTTCAAAATCTTT
GATATCATTGTATCCATACATAAATAATGAAATTGGCCTTCCATATATAT
TGACATCTCGTTTAAATTAAGATTGTCTTGAAAACTTTTTTTCCAAGAAT
AAGATATATTGGACGAAGCCACTCCTAGCCTAATGCTATAGATCGATTTC
GGATACTCGTAATAAGTGGCTCAGAAAAAAATAGTTGTTGAGAATGCCCC
CGTCAGATTTGAGAAAGGCTAATGTTTTGTTTCTATGTTTCAACAAATTA
CAGGTATATACAGGGTGTCCACGACTAATTGGAACTATCTTAAAATTCAA
CCTGCTTGATAAAAATGGAATTTGGAGTGTATTTGTTAATATAAAATAGT
TAGACATGATATTAAACAATAAATTTATTCAACATGTCCTCCATCAGCAG
CCACCATCTTCTCCATCCTGCCCCTAAAGGATTTGCATGCCCTGATTACT
TCCACGGAATCAACAGCATTCCACTCCCTCGTAATAGATCCCAGTGATGC
TCTTGAGGCTGACCTTGCACACCTCCCTCTCCAACTTCCCCTACCAGCAA
TAATCACACAGATTGAGGTCGGGTGAGTTAGAGGGCCAGGTGTTGCGATC
CCACAAAGTGATGTCGTGGGAGTTGAAGAGGTTAGTCGTCCTTATGGTGA
TGTGTGCGGGMGCTGAGTCTTGTTGGAGTATGANCTCCCTCCCAGCGGCC
ATATCCTTCATCCAGGGGATGAGGAACTCCTCCATGACTTCGCAGTACCT
TATCACGTTATCCTTTCCTTGGGATTGAAGAAGAAAGGAGGCATCACCTC
ACCGGTGCTGCAGATGACAGCCAGGATCATCACGGAGGCCGGGAACTTTG
TGATGAAGACCGCAGGGACCTCTTCTCTCTCCTTGGCACGCCACATGTCA
TTCTGGACGTCGTAGCTTCTGTCAACAGTCCAGTTATTCTCGTCGGAGAA
GAAGATGATTCTTCCTCCATGACTCTTCAGGTCATTGACGAGACGCTTAC
CAATGGTGATCCTGGTGGCCTTCATGGATGCCGTGAGGATGTGTTGTTTG
CCCATTTGGTATGACTTGTACCTGAGGTCCTCATTCACAGCCTTGGAGAC
CAGCTGCTTGCTCATTCCACGGTTCTTGGCCAACCTGGACGAGGAAGTCC
CCGGCGAAGCCTTGKTGGACTTCCGGAGGCCTTCAAGGAAGTGGGGAGMG
CGGATTCTGTCACTTCTCATGTTGTGGGCATTGCAGCAGACCTTCTCCTC
AACCTCCCAGGCATTGAAGACCCGGTATACCGTGGTCTTGGGGTAGTTAA
GAAGCTTGTAGATAGCAGAGGGCTTGTGTCCCGTGCGAGCCAATTTGAGG
ATGGCGTCTCTCCTTGCTTGTTCCATGATGACTATTGTTTGTTGTCAAAA
CAATTCTGGTGAAAGCTATAGTGTATTGTTCATGCAACCTTTTATAATAG
TATGATTTAACCCCGAATATCCACATTATGGATCTGGATTAAGTTTAAAG
TAGTTCCAATTTATCGTGGACACCCTGTATACTAATCCTGCATCTCCTTT
TAGTTCCTATTTTGAGCGAAGCAGATTCAAAAGATAACAAGAATTTTATC
AAGACTTTGATGATAATTTATCCTCAAATCATTAAAGGTGAGATTGAGGA
AGATAGAAGTAATCATGAAAATACAATAAAACAACCATCTAATGATTTAC
ATCTTCCTAGAATCTGTGAGGGATTTATTTATGTTGCTGGATATGTGGCC
AAATTGTTACATCAAAAATTTCCCACTCTGGGGTGTAATKCTTCCAGCAT
CCAAGTTCGTCCAAGTCCATGGCTTAAAACATTGTCAAGAGGGAGACTGC
TTCAACCATAGGAATCTTTTTTGGAATTTAAAAAAAAATAGAGAAGCATT
TCATAAAGTTTCAATGGAATTTTTTTGATACCGAACCATATGTGATGGAT
CGACTCATCAGCATAATTGTGGGAAAGTATCCTAAGGAAGAGTATGAAGT
TATCAAAAAATTTATTCGCACTCTTACATTCATTAGTATATAGAAAAATA
GCAAGTAACGAGCGAAAAACTGCTCATCTCATTACTTAAAAAATAGAGAC
CGAAAGTATATATATATTTTTTTTTGAAGCTTATTATTTAATTTTAAACA
ATAAACTTTCGAAATGTGAGTGCCTGTATTCTGGCTAAGTCTAAAAACTT
TGTCAAGCAATTCTTCGGAAATTGGATAGCCAACATTTTTTTCGAAGTAA
AATAGTTCTTCTTTAACACAACTGCAATGCTATTGGTAGCGAAGTTTTCT
TCTTGTGTCAAATTCACAAAGAGTCAATAAGGGAACTGTTTGACTGTGGA
TTAATAAGTTCTATTTTAATAAAGTATTAGTTTTAAGATAATTAAGTTTA
ATTAAATCATTACATAACAATGCATATTAATATTTTTTTTTTTTTAAATT
CATGATTCCTAGTAGATGAAATTATGTTTCATTTTATCACAATCTCCAAT
TCTTTAATGCCGAGAGGGACGAAGTAACACGATCTTTTGTTCGATTGAAC
TCCACACATTCTCCCAAGAATCTTTATCTAGTATCTTCTATTTGATGAAG
AATGCTTATGATAACTTATAGCCATCCTAACAAATGACAGTCAACAGAAA
TAACATGTAAGTAATTACAATACATATATATGGATTGAATATATTGTTCT
TGGAATGAATGATAGAATTGATGATGACAAGGGTGAAGAGTTAACACAGA
ATAACTAATAAACCTTCAATTTAATTTTTCTAACGGATTTGAGTGAAATC
CGACAATCTTCTTCGTTCCTCGCTGTAGTCCACTATCTCAAAATAATCCT
CCTTAGAAACTGAGAATTAGCTTCATATGCTTTACTACGACGTGGAAGAT
CCTCAATGGGGTTGAATGTCGTTTAATAAAATGGAGACCTTGTCAAAATG
TAGACTAAAGAATGTAGATTGTTTATTTTTTATACAATGAAAAATGTAAA
CAAAACACGTAACTACTAATACACTATGACGTCACTACTAAAAGTGTGGT
GGAAGTCACACATCAGTCGTAAACACGTTATGGTATAACCTTGATAGTAG
GTATGTTAACAAAAAATCAAAACAGCATAATTTGTTGCATTTTTATATAA
TATCAATTATGCAATTTTATCCGTATAATGTAATGATGCAAAAATAACCT
TAATTAGTTGGATATATCTTGAACAATTGGATTTTTCGTTGCAAAAAATT
AAAATCTTGTCTCGTAATCATCTCCCTTTGTTTATGAGCAACTTGTCACG
TTTCATCTGTTTCAACACTAGCTGGAACTGCAAATTTGAAAATGACATCA
CAAATCGTAATAAACCTGACGTATACTTATTATTTTTAATAATAAATAAA
CTTACTGAAAAAATAAAAAATTTACAAATTTAAATTAATATATTATTTAC
AGTTCTAGGACAATTTGCCGAAGAGTATTTGCCGAATGTACATTTTGTCG
AATGCCAATTTGCCGACGGGTTATTTGGGACATTTGGGCGAAACATAATA
TTTAATAAATACTATATTGATATATTGAATTGCATATTTAAATTCTATTA
AAAAAGAGTGGTTGTTAAATTGTCTGATTGTTATTGTTCATATACTACAC
ATATGAATTTAATTAAATTAATTAGTGTTATTTTCCAG

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