EMLSAT00000000938, EMLSAT00000000938-696785 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000938
Unique NameEMLSAT00000000938-696785
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1165supercontigLSalAtl2s1165:7501..8946 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000938 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000938EMLSAG00000000938-683704Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004150EMLSAE00000004150-713078Lepeophtheirus salmonisexon
EMLSAE00000004151EMLSAE00000004151-713079Lepeophtheirus salmonisexon
EMLSAE00000004152EMLSAE00000004152-713080Lepeophtheirus salmonisexon
EMLSAE00000004153EMLSAE00000004153-713081Lepeophtheirus salmonisexon
EMLSAE00000004154EMLSAE00000004154-713082Lepeophtheirus salmonisexon
EMLSAE00000004155EMLSAE00000004155-713083Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768727auto768727Lepeophtheirus salmonispolypeptide
EMLSAP00000000938EMLSAP00000000938Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000938

>EMLSAP00000000938 ID=EMLSAP00000000938|Name=EMLSAP00000000938|organism=Lepeophtheirus salmonis|type=polypeptide|length=215bp
MTKPVLYSYFRSSCSWRVRIALNLKAVEFETEPVHLIKDGGEQHKEDYKE
KNPMAQVPTLGIDGIYLTQSVAIMEFLEEKYPNAIRLLPKDVHDRARVRE
LTEVIASGIQPIQNLNVMQKYSTETDKRMEWSKHWITRGFEAVEKLLSKY
SGKFCVGDEVSMADCCLIPQVYNANRFKVEMDQFPNVLRICDELEAIEAF
KKAHPSVQPDCPPNL
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mRNA from alignment at LSalAtl2s1165:7501..8946+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000938-696785 ID=EMLSAT00000000938-696785|Name=EMLSAT00000000938|organism=Lepeophtheirus salmonis|type=mRNA|length=1446bp|location=Sequence derived from alignment at LSalAtl2s1165:7501..8946+ (Lepeophtheirus salmonis)
TTTCCTCATCCCTTGTGGATAATATCCATAATAATTTAAGAATATCATTG
TTAAGTTTTTTGTTTAAGATGTTTAAAGGCTTACTTAAAGGATATAACAA
GACATATCATTTATCTATCTGGATCGTTTCATTTTATATTTCCATAAATG
GGATTTGTATATAATTCAAACATTAAAGTTGCTTATTTTAATATTAATAA
AAAATACAGACTGTTGAAAAATAAAAATAAAAACACGTGATCTGATCTTT
TTACAAATATCTGATAATATAGCAATATCAGTTGTTTACTGTTCACTCTT
GAAGGATGACTAAGGTAAGTTAATAGTATGGGTATATTTATAATTTACCT
TCTTTTTTAAAATATAATTTAGCCAGTTTTATATTCGTATTTCCGAAGTT
CCTGTTCCTGGAGAGTCAGAATCGGTGCGTTCTACAAATTAATGTTATAA
ACTCACAAAAACTCCTTCTTCCATTCTTTCAAATTTAGCTCTAAATTTAA
AAGCCGTAGAGTTCGAAACAGAGCCCGTGCATTTAATTAAGGATGGAGGT
GAACAACACAAAGAGGACTATAAAGAAAAAAATCCAATGGCTCAAGTTCC
AACTTTAGGCATTGATGGGATCTACCTAACTCAATCTGTTGCCATAATGG
AGTTCCTTGAAGAAAAGTATCCAAATGCAATTAGACTTCTTCCCAAAGAT
GTTCATGATAGAGCTCGTGTAAGGGAATTAACAGAGGTAATTGCCTCAGG
GATTCAGCCCATTCAAAACTTGAATGTAATGCAAAAATATAGCACTGAAA
CGGATAAAAGAATGGAGTGGTCAAAGCATTGGATCACAAGAGGATTTGAA
GGTAATGTTTGAATGCAATATCTGTAAATTTTTATCGAGATATGCAAAAA
AAAAAATCATTGATATTTTTATTCAGAGAACATTAAACTCATGAATGATC
ATTATTATTATTTATTATTCACGAATGTAGCCGTTGAAAAGTTGCTCTCA
AAATATTCGGGAAAGTTCTGTGTTGGTGATGAAGTATCCATGGCGGACTG
TTGTTTGATACCCCAAGTATACAATGCCAATAGGTAAAACATTATCTTGT
ATGGGATATTTGCTTATCAAAATTTACTATGCAGGTTCAAGGTAGAAATG
GACCAATTCCCAAATGTTCTACGTATTTGTGATGAATTGGAAGCCATTGA
GGCATTTAAAAAGGCGCATCCTTCTGTGCAACCAGATTGTCCTCCAAATC
TATAGGATTGTTACATAAATAATTAATTCATAGATTACCTTTGTGGAATT
TGTCTTCAAAATAAAGAAACTAACTGTCAAACACTAAACATCCATATGGT
TGTAATTGTATACGACTAAGAGTAATTAATATCAGTAAATCGTTTATTAT
TTTCTAGTTGTGGTATAATAATATTACGCAACAACTTTTACTTAAC
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