EMLSAT00000000939, EMLSAT00000000939-696786 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000939
Unique NameEMLSAT00000000939-696786
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1165supercontigLSalAtl2s1165:86416..88287 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000939 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000939EMLSAG00000000939-683705Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004156EMLSAE00000004156-713084Lepeophtheirus salmonisexon
EMLSAE00000004157EMLSAE00000004157-713085Lepeophtheirus salmonisexon
EMLSAE00000004158EMLSAE00000004158-713086Lepeophtheirus salmonisexon
EMLSAE00000004159EMLSAE00000004159-713087Lepeophtheirus salmonisexon
EMLSAE00000004160EMLSAE00000004160-713088Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771779auto771779Lepeophtheirus salmonispolypeptide
EMLSAP00000000939EMLSAP00000000939Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000939

>EMLSAP00000000939 ID=EMLSAP00000000939|Name=EMLSAP00000000939|organism=Lepeophtheirus salmonis|type=polypeptide|length=543bp
MKKSESYEDSTVYTPSSTDGDTITSQSSYSLNTNNFQHPFFVTQNEATNI
DLKRLRFIDPSDLSSTIGGISQIKYKGTRNDFSSGSIFQIKDLIFALTYL
GTTSSGIAIGLITYESQKADQWSESLILLGGLVSAIFLSLLLRLGRIRIS
VLPTIILFAVSICILFSETLRDDKRVWRFLEFITGFASGLEFVLHQIVIV
ESLKPPWRTILGVLNTTFFLLGFLLVQIFKLIPESHFSIHIRSQDILVAV
NIVHLVIYLPITMRLFPETPRYLFAVRDRKTSCVRSIQWLRGKSASIAEE
YSEMADGLAYLYDAFSPTTIMTTKNKTFMDYMTERVIILPLLSSVTFLLL
TSLTGLQPIVYFFTPDLDFISKNASPKVTILTIAMLLSSIVSSLLINRIG
VKSILLISTSGSTASLLFASSLPYFFNVPISNWLXQSTILLFIISHFFGL
GALSWTLTVESIPVRGFELGMSLSSSLWWSFLLVFSMTRYQMASTVGVNG
IFWLHSVVGILTYLFILFAIPDIKKEDSLIKIQKRYLRSNLKL
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mRNA from alignment at LSalAtl2s1165:86416..88287-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000939-696786 ID=EMLSAT00000000939-696786|Name=EMLSAT00000000939|organism=Lepeophtheirus salmonis|type=mRNA|length=1872bp|location=Sequence derived from alignment at LSalAtl2s1165:86416..88287- (Lepeophtheirus salmonis)
ATGAAAAAAAGTGAATCCTACGAAGACTCTACAGTGTACACACCATCCTC AACTGATGGAGACACCATCACTTCCCAATCATCCTATAGTTTAAATACCA ATAATTTCCAGCATCCTTTTTTCGTTACTCAAAATGAGGCTACAAATATA GATCTTAAAAGACTCCGATTCATCGATCCAAGTGACCTGTCCTCAACTAT TGGTGGAATCAGTCAAATTAAATATAAAGGGACAAGAAATGATTTTTCAT CCGGCTCAATTTTTCAAATTAAGGTTTGTTGAGTTATTGAAGCAATATAG TCAATATGTTAATATTTTGGACATTCATAGGATTTGATTTTCGCATTAAC ATACTTAGGTACTACATCAAGTGGTATTGCAATAGGTCTGATAACATATG AATCACAAAAAGCAGATCAATGGTCGGAAAGTCTCATCCTTCTTGGTGGA CTTGTTTCTGCAATATTCCTCTCTCTACTTCTTCGACTTGGTCGAATAAG GATATCTGTTCTACCGACTATTATACTGTTTGCAGTTTCTATTTGTATTT TATTTAGTGAAACCCTCAGAGATGACAAAAGGGTTTGGAGATTTTTGGAA TTCATTACTGGATTTGCGTCCGGCCTTGAGTTCGTTCTTCATCAAGTAAG AAATAGTTACACAGTTTATCATATACAAATATATTGTTGTATTTTCCTCC TCCATACACAGATCGTCATTGTAGAATCTCTCAAGCCACCATGGAGAACA ATTCTTGGGGTTTTAAACACAACATTCTTTTTATTAGGATTTCTTTTGGT TCAAATTTTCAAATTAATACCAGAATCACATTTTTCAATCCATATTAGAT CTCAAGATATTTTGGTTGCAGTTAATATTGTACATCTTGTTATATATTTG CCTATTACAATGAGGCTCTTTCCGGAGACTCCTAGATATTTGTTTGCTGT TAGAGATAGAAAAACTAGCTGTGTGCGGTCGATACAATGGCTTCGTGGAA AGTCTGCTAGCATTGCAGAGGAGTATTCAGAAATGGCAGACGGTTTGGCA TATTTATATGATGCTTTTTCCCCCACAACAATTATGACAACCAAAAACAA AACATTCATGGACTATATGACAGAAAGGTTGGATCCATTCTACAAAACAA AAATTATTTCACATTTTATGTACAAATTCAATTTCAGAGTTATCATCTTA CCCTTACTATCATCAGTGACATTTCTTCTCTTAACATCACTGACTGGACT GCAACCAATAGTATACTTTTTCACACCTGACTTAGATTTTATATCAAAAA ATGCATCTCCAAAAGTAACGATCCTTACAATCGCAATGTTATTATCGTCA ATTGTGTCTTCACTTCTTATCAACCGAATAGGAGTCAAATCCATACTTCT AATCTCCACTTCAGGCTCTACTGCTTCACTACTATTTGCATCTAGCCTAC CATATTTTTTTAATGTTCCAATCTCGAATTGGCTARCTCAATCTACTATC CTCCTATTCATTATATCTCATTTTTTTGGCTTGGGTAATTATATATAATA AATGTTTATTAAGTAATTGTACAATGTTTTCATACTTATAGGAGCATTAA GCTGGACTCTAACTGTAGAAAGTATTCCAGTTCGAGGGTTTGAGCTGGGC ATGTCTTTGAGTTCCTCATTGTGGTGGTCATTCCTTCTGGTATTTAGTAT GACACGATATCAAATGGCGAGTACAGTTGGTGTAAATGGAATATTTTGGT TACATTCTGTGGTTGGAATTTTAACATACTTATTTATTTTATTTGCTATT CCAGATATTAAAAAAGAGGATTCTCTCATTAAAATTCAAAAAAGATATCT TCGATCAAATCTAAAACTATGA
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