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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1166 | supercontig | LSalAtl2s1166:187765..192866 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000947 >EMLSAP00000000947 ID=EMLSAP00000000947|Name=EMLSAP00000000947|organism=Lepeophtheirus salmonis|type=polypeptide|length=1198bp
MPINNIHADEDNRPLPAGWDVGRDYDGKIYYINHLEKKTTWIDPRLSFPS
TSPHPPGDETSRRGSLDCNNRVVYEGGGIGKASFNSSSSSNGNTNKSSNS
SNGGSGXLDQRDEXKSVQENMLKQYLATAEVDLRAKEELAEIKEQRLHLA
QDEYHHLSKHLNIALSTSTTSLNSTGSCLSTKYDPDLLRADVNHAKSRVQ
RLKRELMNIDSEMTYKQKGVETLSRVNDKFSNSQIPPGITLEEAQAIKIE
LYNIHQSLSTGEQEKVELMKSLACLKDDLTRLQSSESSLDVSXLDSRLST
ASQTDLSGELVPVGTRLAEMARLRLRYDDARRQVQEIQQCLASLEEKMNP
GQLESDKDRLLLIQEKEQLLRELRSITPRSRSNQEMTEIKREILKLENDL
NKAMEVSNRCIAERLKLHEEKQLLLQQLMESMKSVSRLESQLKLLSASTL
SMSSSSSLGSLSSSHASSKGSLSSLSFTDIYGLSSTATSDPAMLDLHKRV
DKILVDSSQSPSVSNTSSGCCSXISSSNXNSPXQPIPSSTTLVTNEEISD
SFVDHKSSISLNNVVEPPLTLSPRSSISSVSSQLHNDQTQIIHHAGQLPA
RTQKHLDKQLGELTLNSVCSSGNHNSERKQQLPIISEGNFQFCEKLLSSS
TSVELSTISESASEALTEDATSGSITSGGGVCATGTRPKVSRRTSSSNAP
RFSSDDSVAGXSGVFESHSAVTVPTFNACPSEGGLSLMNLETAQVQIKLK
YFTSDSILHVGIERARNLSALLIPENGKICVKAALLPCTSSNSSFCTRSL
SDLRKPAFGESFRLSVPIKKLTSKTLQVTIWSISPEGKEECLGSAQVSLA
DFDPSKGTCLRWYNVLSFHFMQQPSEVASSSSNKHLPDNLMAESGCTPKI
GTLKEESSDDSTIISSQTSTLTRNVGPESMTLQGGDHLHYCQEEDEEDTN
EDDEIVILSATEIYDALSANNHKNVSLTDKETNTEYFLLNSPGKRSSSSG
IQQRIXSTDALIKRSQTFSPSASHLNKNDYICRLNRSDSDSAMPLYKRLS
FQRSMSERRSLRIPMSFSTGGKTLRHLSKSSLPRRRKSSSRYLLQTPLDL
ELDLAAQKTKLELLQEEIDRLKIIKRRMEEARERGDKDLPNWLADQDHFQ
KLLSQVESNEQKSTEDRRFEKMIRKSGRDIYKLRKTRTPKGKLDVYSF back to topmRNA from alignment at LSalAtl2s1166:187765..192866- Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000947-696794 ID=EMLSAT00000000947-696794|Name=EMLSAT00000000947|organism=Lepeophtheirus salmonis|type=mRNA|length=5102bp|location=Sequence derived from alignment at LSalAtl2s1166:187765..192866- (Lepeophtheirus salmonis)
TAGTATGCCTATAAACAATATACATGCAGATGAGGATAATCGTCCTCTAC
CTGCGGGATGGGATGTAGGTCGTGACTATGATGGAAAAATTTATTATATA
AATCATCTTGAAAAGAAAACCACTTGGATTGATCCACGGTAAAAAAACAA
CAAAAAAATTATATATTTCTTCAGTTATTTGCGCCCTCTTGTAACAAATA
TTTGAAACATGGATACATTTTATTTATTTTATTATTTATTTTTTTGTTCC
CTTCTTCTTCTTTTTTTCTTGTTATTATTATTACCCCCCCCCCCCCCTTC
MCTTGCGKGCGTCGYCGTTCACGGTCTAAAAAAGTAGTACATACATATTT
GATGTTAAACATAATAGTACCTACATAATAATAATAAATATTTCTATCCA
ATAAGAGAAAGGGTTGTCAGTGTGTGTTTTTACATTTTTTAAATTCAATT
TTTTTTGTGTCAAATGGGGAAGCTAATAGGGGTTTTGAAACTGTTTTATA
GCTAGTCATAACTAAATATAATGCACAGTCAAAATCAATTAAGATCCATT
TTTCTTCATCAAATAGCATATATTCCCAAGTTATCCATGTACATAAAAAT
TCATCAAGTTGTGTAGTAAATGTACTCAAAAATATATTTGAGAACTGAAT
GAGTGTTTTTCCTGTATTTCCCTTAATAATCAAGAACATGGAGGTCTTTG
AAATTGAAAAATGATTGTTATACTTGATAATCGCAGAAACAAAGAAAAAT
CCCTGATTTAAATTACAAAATAGCTTGTCTAAAATGTCATATTGTCTGAG
CGCTAATGAATTAAATGATCAAATGAGTATCTTTAATAATGTAGACTATT
ATTATTTATTACATGAATCTTAGATAATGATGCACTTTAGTGGATAGGAG
CAAACTTTTCCTTGTTGAAACAAAGGTATTGTTCTTATCCGGATTTGACT
ACTATGTAGTGTATATAAAAGACTGAGTCACTTATCAAATATTTTATATT
AATGGAGACTCTTATTTCCAGCCTTTCCTTTCCATCAACATCTCCACACC
CTCCTGGAGACGAAACCTCACGGAGAGGTAGTTTGGATTGCAATAATAGA
GTAGTCTATGAAGGAGGAGGAATCGGAAAAGCATCCTTTAACTCATCCTC
CTCAAGTAATGGCAACACTAATAGTGAGTGGACTGAACAACTAAAAAGTG
GGTTTATGTGAGTTTTAACCTTTTTATGTGGTTTCAGAGAGCAGCAATAG
TAGTAACGGTGGCAGCGGGAGKCTTGATCAACGCGACGAGKGGAAATCCG
TTCAGGAAAACATGTTGAAGCAGTATTTGGCAACAGCGGAGGTTGATCTT
CGAGCCAAGGAAGAACTCGCAGAGATAAAGGAACAAAGGCTACACCTAGC
TCAAGATGAATACCATCATCTAAGCAAGCATCTCAACATTGCCCTATCTA
CGAGTACGACGTCCTGTAAGAGTCAAAACCATCTTTCATGAATCTCATGC
CTTATTGTCCTCAATTTCTTTTTTTAAATATGTTATTCAGTGAACTCAAC
GGGGTCTTGTTTAAGTACAAAGTACGATCCAGATTTGCTTAGAGCGGATG
TGAATCATGCTAAGTCTCGTGTTCAAAGACTTAAGAGGGAGCTCATGAAT
ATTGATTCAGAAATGACTTATAAGCAGAAAGGAGTCGAAACTCTTTCTAG
GTACACACACACATATTTATAAACGAGTATGAATTTCTCACAATCCTTAT
AATGACGATTATTCTTTCAGAGTCAACGATAAATTCTCCAACTCTCAAAT
ACCACCAGGAATTACACTCGAGGAAGCTCAGGCCATAAAAATTGAGCTCT
ACAATATTCATCAGTCCCTTTCAACCGGAGAACAGGAGAAAGTTGAGTTA
ATGAAGAGCCTGGCTTGTCTTAAAGACGACCTTACGCGATTACAATCATC
TGAAAGTTCCTTGGATGTGTCTGKTCTTGATTCACGCCTCTCCACTGCAA
GTCAAACTGATCTCTCTGGAGAACTTGTTCCTGTTGGGACTAGACTTGCA
GAAATGGCAAGGCTTCGTTTAAGGTATGACGATGCCAGGAGACAGGTTCA
AGAAATTCAACAATGCCTTGCTTCACTAGAAGAAAAAATGAATCCTGGTC
AACTTGAGTCAGATAAAGATAGATTGCTTCTTATTCAGGAAAAGGAGCAA
CTTCTCCGGGAGTTAAGGTCCATTACTCCAAGATCCCGATCTAATCAGGA
GATGACAGAAATAAAAAGAGAAATCCTTAAATTAGAAAATGATCTTAATA
AAGCAATGGAAGTATCAAATAGATGTATTGCTGAAAGGTATGAGACTGCA
AGTGAATGAGAAATGATCTTTTCATGTCTCTTCTATTTATACATATATTA
TATATTTTATTTTACTTTGCCTTTCAGGCTTAAACTTCACGAAGAAAAAC
AACTGTTGCTTCAACAACTCATGGAATCGATGAAATCTGTTTCTCGATTG
GAATCTCAGCTTAAACTTTTATCTGCTTCTACTTTGTCAATGAGTTCGAG
CTCCTCTTTAGGATCGCTATCCTCATCCCACGCTTCCTCTAAAGGTTCCT
TATCCTCTTTATCATTTACTGATATCTATGGACTCTCTTCAACTGCAACT
AGTGATCCTGCCATGCTGGATCTGCATAAAAGAGTTGATAAAATACTTGT
GGACTCATCTCAGAGCCCATCTGTTAGTAATACCAGTAGTGGCTGCTGTA
GCAKCATCAGTAGTAGTAACMAAAATAGYCCAMCMCAGCCAATACCTTCG
TCAACTACACTGGTCACCAATGAAGAAATCAGTGATTCCTTTGTCGATCA
TAAATCTAGTATAAGTCTCAATAATGTTGTTGAGCCACCTCTGACTCTTA
GTCCAAGGAGTTCTATTAGTTCCGTTTCTTCGCAACTGCACAATGATCAG
ACACAAATTATTCATCATGCTGGACAGTTGCCAGCAAGGACTCAAAAGCA
TTTAGATAAACAATTAGGAGAATTAACTTTAAACAGCGTCTGCAGCAGCG
GTAACCATAATAGTGAAAGAAAACAACAACTTCCTATCATTTCCGAAGGA
AATTTTCAATTTTGTGAAAAGTTACTAAGTTCTTCCACAAGTGTGGAGCT
CTCCACCATTTCAGAGTCTGCTTCTGAAGCATTGACAGAAGATGCTACAA
GTGGTAGTATAACTAGTGGTGGTGGKGTTTGTGCTACAGGAACTCGTCCG
AAAGTCAGTAGACGGACATCATCATCCAATGCTCCTAGATTTTCTAGTGA
TGATTCAGTGGCTGGGGRTTCGGGAGTTTTTGAATCACACTCAGCTGTCA
CCGTTCCTACTTTTAACGCATGTCCGTCAGAAGGAGGATTATCCCTCATG
AATCTAGAGACTGCTCAAGTACAAATTAAATTAAAATATTTCACCTCAGA
TTCGATTCTTCACGTTGGTATTGAAAGAGCCAGAAACCTTTCGGCCTTAC
TCATCCCTGAAAATGGAAAGATGTAGGATAAAGAAACTAAACTATAATTA
TGTACTTAGTGTGTGAACCCCTTTTATTTTATTTTTTCAGTTGTGTAAAG
GCGGCTCTTTTGCCATGTACCTCGTCAAATTCGAGTTTTTGTACTCGTTC
TTTATCAGATCTCCGWAAGCCGGCTTTCGGAGAAAGCTTTCGACTATCGG
TTCCAATCAAAAAACTCACCTCTAAAACCTTGCAAGTCACTATTTGGTCA
ATATCTCCCGAAGGAAAAGAAGAGTGTCTTGGCTCTGCTCAAGTCAGCTT
AGCAGACTTTGACCCAAGTAAGGGCACCTGTCTTCGATGGTACAATGTTC
TCAGTTTTCATTTTATGCAACAGCCTTCAGAGGTGGCATCCTCCAGTAGT
AATAAACACTTGCCAGATAATTTAATGGCAGAAAGTGGATGCACTCCAAA
GATTGGAACCCTAAAGGAAGAAAGTAGTGATGACTCCACCATTATATCTT
CCCAAACTTCTACATTGACCCGAAATGTTGGGCCCGAGTCCATGACCCTT
CAGGGAGGGGATCATTTACATTACTGTCAGGTATGTTGAGGGKATTTAGA
AAGCAAATATAATCCTCTAAAATAAAAAGAGTGTGATATAAATTATACAT
AATTATTACTACTTTTTCTTCTGGGTTATTTATTCTAGGAAGAAGATGAG
GAAGATACAAATGAGGATGATGAAATTGTGATACTATCAGCTACTGAAAT
TTACGATGCCTTATCTGCTAACAATCATAAAAACGTTTCTCTTACTGATA
AAGAAACGAATACAGAATATTTTTTACTCAATTCTCCTGGGAAACGAAGC
AGTAGCAGTGGTATCCAACAAAGGATASCATCCACTGATGCACTAATCAA
AAGGTCCCAAACTTTCTCTCCGTCAGCTTCTCATTTAAACAAAAACGATT
ATATATGTAGGGTAAGTTACTTAAGTTTAAAGAACCCCTTCAAATATCAG
ATATCCCTCAATCACTCACATTGATCTCTTACAGTTAAATCGAAGTGATT
CAGACAGTGCCATGCCTTTGTATAAACGCTTATCTTTTCAACGCTCAATG
TCAGAAAGACGTTCATTGCGAATACCAATGTCCTTCTCCACTGGGGGAAA
AACATTGCGTCATTTATCAAAATCCTCGCTTCCTAGAAGGAGAAAGTCGT
CGAGTAGATATCTCTTACAAACCCCTCTGGATCTGGAATTAGATTTGGCG
GCTCAAAAAACAAAACTCGAACTTCTTCAAGAAGAAATTGATCGACTTAA
AATTATCAAACGGCGTATGGAAGAGGCTAGAGAGAGAGGGGATAAAGATT
TGCCAAATTGGTTGGCTGATCAAGATCACTTTCAAAAATTATTGAGCCAG
GTATGTCTTTTTGATCTTACCTGAGAGTATAAGTTTTTTTCATTTTGCTC
ATCATGAATTGATTTACTTTTAGGTCGAATCAAACGAGCAAAAATCTACG
GAGGATCGCAGGTTCGAAAAAATGATTCGAAAAAGTGGGAGAGATATTTA
TAAACTGAGGAAGACTCGAACACCTAAAGGAAAACTAGACGTGTATTCCT
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