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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| LSalAtl2s1166 | supercontig | LSalAtl2s1166:23108..29489 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000949 >EMLSAP00000000949 ID=EMLSAP00000000949|Name=EMLSAP00000000949|organism=Lepeophtheirus salmonis|type=polypeptide|length=1854bp
MAXXEEKDESFGGDQQEEVEGVESKEMEEAEEVEEEDSDYSSNKKKKRGK
KRKASKESKKGNKKKKKRKADSDVSDSELNGDEESSSATSSVKRGRKKKS
ESSVSKETEDMPSVNEVCQNFSLNDVDLQYTDADYQNLTTYKLFQQNYRS
RIQSVNPKVPQPKLMMLVAAKWRXFQASNPXAAXESNDEEEEEQEQEEEE
EEEEEQEQEQEQEQEEEEEEETEEAEDSQPRRRARTSRGRPKKVMDEEIY
DFSDEDDESIAQKRRKSAGRGTTPGRPKKGSKTPTSNKKTNKIPTIKIKL
GRKSKGGSKAGSSDNDEEEDSTKKDSDAEFEEMLKEAEEASKDDVEFLKE
EKKGKPKMKIGNKNKRKGRKKKNFANDESEHQEYCEVCQQGGEIILCDTC
PRAYHLCCLDPELDEAPEGKWSCPHCELNGPENADVDEEDEHMEFCRVCK
ESGELLCCDSCPSSYHLKCCEPPLECIPDGEWTCPRCACEPLPGKCEKIL
TWRWKEEEXKKEXKPAETTETGARKKPKKKLPKAEREFFIKWKEQSYWHC
SWIKEIQLDVFHPQTYRMYLRKNDMDEPPRYDEDGDDEKSGGRLKHHRKA
DDPLKLYERYFRYGIRPEWLQIHRILNRRTFKDGSVQYFIKWRDLPYIDC
SWENEDFDLPDYTTYVQHYEDLRYVCGVDGKGIKKKRKKKDKPTIDLNEV
YESQPRDWLVEGLNLHPYQLEGISWARHSWSNGIDIILAXEMGXGTPLQN
NLEELFYLLNFLTPSKFNDLDAFQSNFTDIAKEEQVKQLHALLGPHMLRR
MKADVLKNMPSKSEFIVRTNLSNMQKKYYKNILTHNFEALRARSGVQTSL
LNVMMELKKVANHPXLLAAAAEEAPLSVSGLFEVKAMTQACGKLVLLSKM
LRKLKETGHRVLIFSQMTKMLDLLEDFMEGEGYKYERIDGGVTGTLRQDA
IDRFNYPNAEQFVFLLSTRAGGLGINLYTADTVVIYDSDWNPHNDIQALS
RAHRIGQKNKVMIYRFVTRNTVEERVTQVAKKKMMLTHLVVQPGLSGSKT
NLSKKEIDDILKFGTEELFNTENREEDIVYNDTAIESLLDRSQEGIEEKE
SWANEYLSSFKVAXYQTKDNTQEEEIEVLKEEAENTDPAYWEKLLRHHYE
QHQEDVSRSMGKGKRIRKQVNYGDGDTTGRGADDGSWQDNMSEYNSDFSL
PSDDDNNDDDFDEKNDDPNMAGTRRSRHGRIRNEKDRPLPPLLARVGGNI
EVLGFNARQRKSFLNAIMRYGMPPQDAFNSQWLVRXLRGKSEKNFRAYVS
LFMRHLCEPGNEHTETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEM
INGKNSMPHIAAKMAEAAKEQGKANNNPPSNTESGTTTPATGAGTPQSGT
PAXSARASPAPKDEKEKSEESKDGEEESKEAVTEKQPEKQLEKQPENQSE
KQPEKQSEKQPEKQSEKPSESKEKEPXPTTTPSKEATSSPSEEVKMEVDE
KESTSSSVKKDEPSASAASPSSSSSSSNDKKETATEENEESSSSSTSKPA
EESSKSTSTNNDTEKKENGDSDVKKEIKKEENPEDDKKPPKFMFNIADGG
FTELHTLWQNEERAAVPGREYEIWHRRHXYWLLSGIVTHGYGRWQDIQND
YRFCIINEPFKMDVGKGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYL
NLTQDANHPAMALNTRFTEVECLAESHQHLSKESLAGNKPANSVLHKVLN
QLEELLSDMKSDVSRLPASLARIPPVAQRLQMSERSILSRLVTTQAGQNA
SDTSITPAGQFPAGFQQGQLPSAFGTNIASFRPQYSIPGQGTAFPGSAPP
PDSK back to topmRNA from alignment at LSalAtl2s1166:23108..29489- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000949-696796 ID=EMLSAT00000000949-696796|Name=EMLSAT00000000949|organism=Lepeophtheirus salmonis|type=mRNA|length=6382bp|location=Sequence derived from alignment at LSalAtl2s1166:23108..29489- (Lepeophtheirus salmonis)
ATGGCGKCTGRTGAGGAAAAAGACGAAAGTTTCGGTGGGGATCAACAGGA
AGAGGTGAGGCAAGGGGGATAAGGGGGATAAGGGGCCTGTCTTAAATGTT
AAAACGTACGTGTTTGTTGTAGGTGGAAGGTGTAGAGTCGAAGGAGATGG
AAGAAGCGGAAGAGGTGGAAGAAGAGGACTCGGACTACAGTTCCAACAAA
AAGAAAAAGCGCGGAAAGAAGCGAAAAGCCTCCAAAGAGTCTAAGAAAGG
GAATAAAAAGAAGAAGAAGCGGAAGGCGGATTCAGACGTCTCTGACTCTG
AATTGAATGGAGATGAAGAGAGCAGCAGTGCGACCAGCTCTGTGAAGAGA
GGGCGGAAAAAGAAAAGTGAGTCAAGTGTGAGCAAAGAAACGGAGGACAT
GCCCTCAGTCAATGAAGTCTGTCAAAATTTCTCCCTCAATGATGTGGATC
TACAATACACCGATGCGGATTATCAAAATCTCACTACTTACAAACTATTT
CAACAAAACTATAGATCTCGCATTCAATCCGTTAATCCCAAGGTTCCTCA
GCCCAAATTGATGATGCTCGTTGCTGCCAAGTGGCGGGRATTTCAAGCTT
CCAATCCTGMTGCTGCTGRTGAAAGCAATGATGAAGAAGAGGAAGAGCAG
GAGCAGGAAGAAGAAGAAGAAGAAGAGGAGGAACAGGAGCAGGAACAGGA
ACAGGAGCAGGAAGAAGAAGAAGAGGAAGAAACGGAGGAAGCAGAGGATT
CCCAACCTCGGAGACGAGCAAGAACTTCCCGTGGAAGACCCAAAAAGGTT
ATGGATGAAGAAATCTATGACTTTAGTGATGAAGACGATGAGTCCATTGC
TCAAAAACGACGAAAGTCTGCTGGACGAGGAACTACTCCTGGACGGCCCA
AAAAAGGCTCCAAAACACCGACTTCAAACAAAAAGACAAATAAAATCCCA
ACAATTAAGATTAAACTTGGAAGGAAAAGCAAGGGAGGATCTAAGGCAGG
TAGCTCAGATAATGATGAGGAAGAAGATTCCACTAAGAAGGATTCTGATG
CTGAATTTGAGGAAATGTTGAAGGAGGCTGAGGAGGCATCTAAGGATGAC
GTTGAATTCTTGAAAGAGGAAAAGAAAGGTAAACCAAAAATGAAGATTGG
AAATAAAAACAAAAGAAAAGGACGTAAAAAGAAGAACTTTGCTAATGATG
AGTCCGAGCATCAAGAGTATTGTGAAGTATGTCAACAAGGGGGAGAAATT
ATTCTTTGCGATACTTGTCCGAGAGCATACCATCTTTGTTGTCTGGATCC
CGAACTTGACGAAGCTCCTGAGGGTAAATGGTCTTGTCCACATTGTGAGT
TGAATGGTCCAGAGAATGCCGATGTTGACGAGGAGGATGAACATATGGAA
TTTTGCAGAGTATGCAAGGAATCGGGGGAACTTCTATGTTGTGATTCATG
TCCAAGTTCCTATCACTTGAAATGTTGTGAACCTCCTTTAGAGTGTATCC
CTGACGGAGAATGGACTTGTCCGAGATGTGCTTGTGAACCACTTCCTGGA
AAGTGTGAAAAGATTCTCACATGGCGCTGGAAAGAAGAGGAAAGWAAGAA
GGAAGAMAAGCCTGCAGAAACAACTGAGACTGGAGCACGAAAAAAACCCA
AAAAGAAACTTCCTAAAGCTGAGAGAGAGTTCTTTATCAAATGGAAAGAG
CAATCTTACTGGCATTGCTCTTGGATCAAAGAAATACAACTCGACGTATT
TCATCCACAAACCTACAGAATGTATCTGAGGAAAAATGATATGGATGAAC
CACCGAGGTATGACGAGGATGGAGATGACGAGAAATCTGGAGGTCGACTT
AAGCATCATCGAAAGGCTGACGATCCTTTAAAACTCTATGAACGTTATTT
TAGATATGGAATTCGACCTGAATGGCTGCAAATCCATCGAATTTTGAATA
GAAGAACTTTTAAAGATGGAAGCGTTCAGTATTTTATCAAGTGGAGAGAT
CTTCCCTATATTGATTGCTCCTGGGAAAATGAGGACTTTGATTTACCTGA
TTATACCACTTATGTGCAACACTATGAAGATCTTCGCTATGTGTGTGGTG
TTGATGGAAAGGGTATTAAGAAAAAGCGAAAGAAGAAGGGTGAAGATGGC
GGGGAAGGAGGGGAAGGTGAANAGAAAGTATAATCCTCCTCCAGATAAGC
CAACAATTGACCTCAACGAGGTCTATGAAAGTCAACCCAGAGATTGGTTG
GTTGAGGGATTAAATCTCCATCCCTATCAGTTGGAGGGTATATCATGGGC
TAGACATTCATGGAGTAATGGTATTGACATCATATTGGCTGRTGAAATGG
GGKTGGGTAAAACAATTCAAACAATCACATTTTTATATTCTCTTTATAAA
GAAGGACACTGTAGAGGGCCATTTCTAATTTCTGTTCCCCTTTCCACCCT
TATAAATTGGGAGAGAGAGTTTGAGCTATGGGCTCCAGAATTTTATGTTG
TATCCTACGTGGGAGACAAAGACTCACGAGCAATAATCAGAGAGCATGAG
CTTAGCTTTGAAGACAATGCAGTACGCAAAGGAGACAAAGCTTCAAGGAT
CAAGGCATCGACCGTCAAGTTTCACGTTCTTCTTACTTCCTATGAATTGM
TTTCTATAGACTCTGCATGTCTAGGATCAGTTCAATGGGAAGTACTTGTT
GTTGATGAAGCTCACAGGCTCAAGAATTCGCGATCAAAATTTTTCCAATT
TTTGAGTAATTATAGTATCAACTATAAAATGTTGCTTACAGGTACTCCTC
TTCAAAACAACTTGGAAGAGTTGTTCTATCTATTGAACTTCTTGACACCG
AGTAAATTTAACGATCTCGATGCATTCCAATCTAACTTTACTGACATTGC
TAAAGAAGAACAAGTAAAACAACTCCATGCATTATTGGGGCCACATATGC
TTCGGCGAATGAAGGCTGACGTACTGAAGAACATGCCTTCCAAGTCTGAG
TTTATTGTTCGAACGAATCTGTCGAATATGCAGAAGAAGTATTACAAAAA
TATTTTGACGCATAACTTCGAAGCACTTCGTGCCAGATCAGGTGTACAAA
CTTCACTTCTTAATGTCATGATGGAATTGAAAAAGGTTGCTAATCATCCC
TMCCTTCTCGCTGCAGCCGCAGAAGAGGCTCCTCTTAGTGTTAGTGGGCT
TTTTGAAGTCAAGGCTATGACCCAGGCTTGTGGAAAATTAGTTTTACTTT
CTAAAATGCTTAGAAAACTAAAAGAAACTGGACATCGTGTTCTTATTTTC
TCACAAATGACTAAAATGTTGGATCTCTTGGAAGATTTTATGGAAGGAGA
GGGCTACAAGTATGAGAGAATCGATGGAGGTGTCACAGGAACCCTTAGAC
AGGACGCTATCGATAGGTTTAATTATCCTAATGCTGAGCAATTTGTTTTC
TTACTCTCAACAAGGGCTGGAGGCTTAGGAATTAATCTCTATACGGCTGA
CACTGTTGTTATTTATGATTCGGATTGGAATCCTCATAATGACATTCAAG
CTTTAAGCAGAGCTCATCGTATTGGCCAAAAGAACAAAGTCATGATATAC
CGATTTGTCACACGAAATACAGTTGAAGAACGTGTAACACAAGTAGCAAA
AAAGAAAATGATGTTGACCCATTTGGTTGTACAGCCAGGGCTAAGTGGTT
CGAAGACTAATTTGTCAAAGAAAGAAATTGATGATATTCTGAAATTTGGA
ACCGAAGAACTTTTCAATACAGAAAACCGGGAAGAGGATATCGTATATAA
TGATACCGCAATTGAATCTCTATTAGATAGGTCTCAAGAAGGAATTGAAG
AGAAGGTAAAATAATTATTTTCTTCTCATTTAATTTAACGATGAGGACCT
AAGAGTCCTCTTTTGTTTCTTCTTATTATGACAATAATAATTAATCATTA
ATTTTACTAATTTTTACTTTCATTCTCAAGGAATCTTGGGCGAACGAGTA
CTTGTCGTCATTTAAAGTGGCTAMTTATCAAACAAARGATAACACTCAAG
AAGAAGAAATTGAAGTTTTAAAGGAAGAAGCAGAAAATACGGATCCTGCC
TATTGGGAGAAATTGCTTCGTCATCACTATGAACAACATCAAGAAGATGT
TTCACGTTCCATGGGCAAAGGAAAGAGAATAAGAAAGCAAGTTAATTATG
GGGATGGAGACACTACTGGAAGAGGAGCAGATGATGGTTCCTGGCAAGAT
AATATGTCTGAATATAATTCTGATTTCTCTTTACCCTCCGATGATGACAA
TAATGATGACGACTTTGATGAAAAGAATGACGATCCCAATATGGCCGGTA
CAAGGAGATCTCGACACGGGCGAATTAGGAATGAAAAGGATAGGCCCTTA
CCACCTCTACTTGCTCGCGTTGGAGGTAATATTGAGGTCCTTGGCTTTAA
TGCACGTCAAAGAAAATCATTTCTTAACGCAATTATGCGCTACGGAATGC
CTCCTCAAGATGCATTTAATTCACAGTGGCTTGTTCGTGRTCTTCGGGGT
AAATCTGAAAAAAACTTTCGTGCATATGTTTCACTTTTTATGCGGCATCT
TTGCGAGCCGGGCAATGAACACACAGAGACTTTTGCTGATGGAGTTCCAC
GAGAAGGCCTATCAAGGCAGCATGTACTCACTAGGATCGGTGTCATGAGC
CTTATTCGCAAAAAGGTTCAAGAATTCGAAATGATAAATGGAAAGAATTC
CATGCCTCATATTGCAGCTAAAATGGCTGAAGCCGCCAAAGAGCAAGGTA
AAGCTAATAATAATCCCCCTTCAAATACCGAAAGTGGAACCACTACACCT
GCAACTGGTGCTGGAACTCCTCAAAGTGGTACTCCAGCCTMAAGTGCCAG
AGCAAGTCCTGCCCCTAAAGATGAGAAAGAAAAGTCTGAAGAATCCAAAG
ATGGTGAAGAGGAATCCAAGGAAGCGGTGACGGAAAAACAGCCGGAAAAG
CAGTTGGAAAAACAACCGGAAAACCAATCGGAAAAACAACCGGAAAAACA
ATCAGAAAAACAACCGGAAAAACAATCGGAGAAGCCATCTGAATCCAAAG
AGAAAGAACCTMCCCCGACGACGACGCCGTCTAAAGAAGCAACATCATCT
CCTTCTGAAGAAGTGAAGATGGAAGTAGATGAAAAAGAATCAACTTCTTC
TTCGGTTAAAAAGGACGAACCCAGTGCGTCGGCGGCTTCTCCTTCCTCCT
CCTCTTCCTCCTCGAATGATAAAAAAGAAACGGCGACGGAAGAGAATGAG
GAATCCTCATCTTCTTCTACATCAAAGCCGGCAGAGGAATCGAGCAAGTC
CACTTCTACGAATAATGATACGGAGAAAAAAGAAAACGGAGATTCTGATG
TGAAAAAGGAAATCAAGAAAGAAGAAAATCCGGAAGATGACAAAAAACCT
CCCAAATTTATGTTTAATATTGCAGATGGAGGTTTTACTGAGCTCCACAC
GCTTTGGCAAAACGAAGAGAGAGCTGCTGTTCCTGGTAGAGAATACGAGA
TCTGGCATCGACGCCACGMTTACTGGCTTCTTTCTGGTAAGCTAATTTAG
TTTTTTTAATTAAAAACAATACAAAAACTGATTTTGTATTGTTAATTTTA
ATAGGTATTGTGACTCATGGCTATGGACGTTGGCAAGATATCCAAAACGA
CTACCGATTCTGTATTATTAACGAACCTTTCAAAATGGATGTTGGAAAGG
GAAACTTTTTGGAAATAAAGAACAAGTTCTTAGCACGGAGATTTAAGCTC
CTCGAACAAGCTTTGGTTATCGAAGAGCAACTAAGACGTGCTGCATATTT
GAACTTGACCCAAGATGCCAACCACCCTGCCATGGCTCTAAATACTAGAT
TCACTGAGGTGGGTAAACATTTTGTTTCTTTAGATATATTTGTATTCATG
TACAAAATTATATTATTATTATAGGTGGAATGTTTGGCTGAGTCTCATCA
GCACCTTTCGAAAGAAAGTTTAGCTGGTAATAAGCCAGCAAACTCCGTTT
TGCACAAAGTTCTTAACCAACTCGAGGAATTACTCTCCGATATGAAGTCT
GACGTATCTCGTCTACCTGCTTCCCTGGCAAGGATCCCACCTGTAGCACA
GAGACTACAAATGTCTGAAAGAAGTATTTTAAGCAGATTAGTTACGACTC
AAGCTGGCCAAAATGCTTCAGATACTTCAATTACACCTGCGGGACAATTC
CCTGCAGGGTTTCAACAAGGACAACTTCCTAGTGCATTCGGAACTAATAT
TGCATCCTTCCGACCTCAGTACTCAATACCCGGCCAAGGCACCGCATTTC
CTGGCTCTGCACCTCCTCCTGATTCTAAATGA back to top
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