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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s117 | supercontig | LSalAtl2s117:667180..672155 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001078 >EMLSAP00000001078 ID=EMLSAP00000001078|Name=EMLSAP00000001078|organism=Lepeophtheirus salmonis|type=polypeptide|length=972bp
MDFNELSRQTYAALQNASTQNXPELLKSAEDTLRCFEEIPGFHVVLLEVI
KDTNGSPVPLRWXAVLYLKNGVDRYWRRVSSLRISDEEKQSLRKGFLELF
HEPISPIALQIAVLIGKIARIDVPKEWPELLPALSDRXQSQEPLVQHRAL
LVLYHTIKSLSTKRLPIDVQTFYDTVEKILPFALRLWEVHHSNFVQQASN
SPCDENAVLSSLEKSILSIKVIRKCLVYGIKDLKNNNLAMKFLSSIHTSA
KLTLEIRNSRGSCDLLEKYAILYMKIMKDVQECHPFSFIPVLKQSLEFVC
SLIFTDQGAPYVFPRFVIFCLNFIKQVLLCTYYRLPETEGEVASQIIQKF
FDVASVTEIYKRLISKFLPLSAEDLNLWDRDPEEYACEDGGDSWKYSYRP
CCEALFLTFFNQYCDILAPLLTGLAKEVSLSPTLPSDLQGILYKDAVYNA
IGLSPFDLYEEIDFDNWLQNCLERELTIGDPNYRIIRRRTAWLIGRWSGV
RLSPEMRPKVYRILLPLLRPEEDMVVRLTTCKSLKVIMDDFDFSVDEFEP
FCGVVFEELFRLLKEVQECDTKLCVLNVLAYVIERIGVTIRPYCYELLRY
LPSLWEDSSAHDMLRCSILSALVHIVQGLGTICEVLLPTFIGPIIQLSTD
LKENSHVYLLEDGLELWLTVLNNSKELSSTLSSLALNIPPLLQLGSENLR
TILYILSSYVLLSPTKFLHSFGKEINSILTDQIMDLQDEGVLIIYRLVEL
VIKTCPPSSSSIYYFKSLIVSSLKAIHNASHSYSMLMSCELSILSRLILC
YPKEFGDFSIELARELNQPHEKVTGQILDHWLEKMDLMWXSEEKKLLAXA
LCSLLTSGSPVVLDRIYMIFLNVTSALNDVTKPDNNGGFVDTLVMSNPCQ
TDDGDNAEYETEHEARKRRLASCDSVHSVDLREYFQTQLAGLYQQIGQSR
YSEMIENIDVETKANMKEFVTI back to topmRNA from alignment at LSalAtl2s117:667180..672155+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001078-696925 ID=EMLSAT00000001078-696925|Name=EMLSAT00000001078|organism=Lepeophtheirus salmonis|type=mRNA|length=4976bp|location=Sequence derived from alignment at LSalAtl2s117:667180..672155+ (Lepeophtheirus salmonis)
GTGGGATTGAAATAGTGTGGTTGGAATGGAGGAAGGAGAAGGGTTTTGAT
TGGGTATAAAGTGTTTGTAGCTGTGTGGAAGAGAGTTGATCCAAAGTGAG
GTAATTTCACATTTTCGTAAGAAGAGAGAAAAACAAATAATATCCAAGGA
TGGATTTTAATGAATTGAGCCGGCAAACCTATGCGGCCTTACAAAACGCT
TCCACTCAGAACGMCCCCGAGCTTCTGAAGAGTGCGGAAGACACTCTGAG
ATGCTTCGAAGAGATCCCTGGATTCCATGTGGTGTTATTGGAGGTCATCA
AGGATACAAATGGATCTCCAGTSCCTCTTCGGTGGMAAGCCGTGCTCTAT
TTGAAAAATGGAGTGGACCGCTATTGGAGGCGCGTCTCATCACTGTAAGT
TCCTCTTCCGTTCATTCATTATTTGTATTAATATTCATAATAACTCATTT
ATTCATTCTCGGATTAGACGAATCTCGGATGAGGAGAAACAAAGTCTTCG
CAAGGGCTTTTTGGAGCTCTTCCATGAGCCCATCTCACCTATTGCTCTAC
AAATTGCCGTGCTCATCGGTAAAATAGCGCGTATCGATGTTCCTAAAGAA
TGGCCTGAACTCCTACCCGCTCTATCGGATCGGGKACAGTCCCAAGAACC
TCTAGTACAGCATCGAGCACTTCTTGTTTTATACCACACCATCAAAAGTC
TGTCCACAAAGAGGTATATTCAATACTCTTCGCATCATTACTTCATTTAA
TGCATGGAGCCCAAAATGTATACGTACATTATTTTTGAAATAAGTGTGCG
GGTTTAGCTTTGACAATGGGATTCCATGACTAATTGGACACGGATCAACA
TTAGCATCAAATAAATGCAACTAATATATAGTTTTTTTTAGATGTATTGA
CCTATCTTTTTCAAAACACTTTTTCTGATAACATTTATTAGCGTTATTTA
ATCCATAAAATACGGAAATGAATATAGAAACCTTTTACCGACATGGATTT
GGCCTTTAGACCCCTTTTTAAATAATTTTTTAAGGTGTAGCTATGATATT
TCTACGAGTAAGAACTAAATGAATGAAAATAACAAAGAAGTCAATAGAAT
TTCATGAAAAACTTGTTCTAGATCTGTATTAGGAATCATAATATTGACCC
ATCTTGTTTTGTACATTTTTTAAATAAGTGGGTTCCATGACCCATTGGAT
CCAGATCAGTATTCAGAGTACTGATAAAAATGATAGTATTAATTAAAATA
TAATTTATCTTATATCGATTTTTAGATACATTGTCCTATATTGTTCAAAA
CATTTTTTCTGAGAATACTGCAATAGCATTTTCATCCCCGGGATGAAACC
CACATTTATTTTTGTTATTTAATCAGTAAACCACGAAAATGACAATACAA
CTTTTTACTGACATAGCTTTGGCCTCATACCCTTTTAAAAGAATAAGTTT
TTAGGGTATAACTACTAATATTTCAACGNTGAATTAAGTGTAGAAAATTA
AAATCAAAGTTAATAATAATTAATTGGGGGTTTTTCAATTGAATTTCATT
ACAAATTGTACCCAGATCAACATTAAGAGTGCATTAGGACTCATAGCCTC
AAGTAAAATATCATTAATATTATACATATTTGTAGATCAATTGAAGAACA
CGTGACCTCAGGGGTTATCTTGTTCAAAACACTTTTTCCAATAATTTATT
GAATAAAATAACATTCTTTTTTCATTTATTACTCGGGGGGAGGAGGGAAA
TATTTTGATCGATTTTAATATGATAAGTAATATTGAAGTACTGATTTGTT
CCCAATTTTCATGGAATTATGTTAAAATGACCCCCATATTGATATATAAA
AACCGGAGGCATACAATCCGGAGGATTTTACTTAGGGGTGGGAGGAAAGG
GCTCAGAAATATAAACTTAATCAACAACCCATGATTTTGTATAATAAAAT
GTCTCTCAAAATTCTCTTTCTCCATTGTGTTCCTACTTATCATAGTTTCT
TTATATATCTTTTTTTTAAATCTAGATTGCCCATAGACGTACAAACCTTC
TATGATACCGTTGAAAAAATTCTACCTTTTGCCCTTAGACTCTGGGAAGT
ACATCACTCAAACTTTGTTCAACAGGCATCCAACTCTCCCTGTGATGAAA
ACGCAGTTCTCTCCTCTCTTGAAAAGTCTATTCTTTCCATCAAAGTTATC
CGTAAATGTCTCGTCTATGGCATAAAGGATTTAAAAAATAATAACTTAGC
CATGAAATTTTTATCCTCCATACATACTTCTGCCAAACTCACCCTTGAAA
TTCGGAATTCTCGAGGATCATGTGATCTTTTAGAAAAATACGCTATTTTA
TATATGAAAATTATGAAGGATGTCCAAGAATGTCATCCCTTCTCCTTTAT
ACCCGTTCTCAAACAAAGCTTGGAGTTTGTGTGCTCCTTGATTTTCACGG
ATCAAGGCGCACCCTATGTCTTCCCAAGATTTGTCATTTTTTGTCTTAAT
TTCATAAAACAAGTTTTACTCTGCACGTATTATCGTCTTCCAGAGACGGA
GGGCGAAGTTGCTTCTCAGATCATTCAAAAGTTCTTTGACGTAGCATCTG
TTACAGAGATTTATAAAAGACTCATATCCAAGTTTTTACCATTGAGTGCT
GAGGATCTTAATTTGTGGGACAGGGATCCTGAGGAATATGCTTGCGAAGA
TGGGGGTGATTCTTGGAAATACAGTTATCGCCCTTGCTGTGAGGCCCTTT
TTCTTACTTTTTTCAACCAATATTGCGATATTTTAGCACCACTTCTTACT
GGACTCGCCAAGGAAGTTTCTCTCAGTCCTACACTTCCCTCAGATTTACA
AGGGATCTTATACAAAGATGCAGTATACAATGCAATTGGACTCTCTCCAT
TTGACTTGTATGAAGAAATTGACTTTGATAATTGGTTACAAAATTGTCTT
GAGAGAGAGTTAACCATAGGAGATCCCAATTATCGTATTATTCGTCGACG
AACCGCCTGGCTAATTGGTAAACTTTCATTTCCCTTACATTTACATGAAT
TCTTAATCTTTTCACAAATATAGGAAGATGGTCAGGGGTTCGTTTATCTC
CTGAAATGAGGCCTAAAGTGTATCGAATTTTATTACCTTTATTACGACCT
GAAGAAGATATGGTTGTGCGTCTCACTACTTGCAAATCACTTAAGGTTAT
AATGGACGATTTTGATTTTTCCGTTGATGAATTCGAACCCTTTTGTGGTG
TGGTATTTGAAGAGCTCTTTAGACTTTTAAAGGAAGTACAGGAATGTGAT
ACTAAAGTATGTTCAAAATTATGTTAATTAATTAATATTAATCTTTATTT
ATAAAACTTTTCTAGTTGTGTGTACTTAACGTATTAGCATACGTCATTGA
AAGGATTGGAGTAACGATAAGACCCTACTGTTATGAACTACTTCGATATC
TTCCTTCTCTTTGGGAAGATTCATCCGCACATGATATGTTACGGTGTTCT
ATTCTTTCAGCATTAGTTCATATTGTTCAAGTAAAACTTTCATTTATTTC
GAAGAGCTAAATTACTTAACTAAATTCATTTTTCCTTCTTTTTCCTAGGG
CCTTGGCACTATTTGTGAGGTTCTTCTTCCGACATTCATTGGTCCAATCA
TACAACTCTCTACGGACTTGAAGGAGAATAGTCACGTATATTTACTTGAG
GATGGTTTAGAACTCTGGCTCACAGTTCTAAATAACTCTAAAGAGCTTTC
CAGCACTCTTTCCTCCCTTGCTTTGAATATTCCTCCCTTACTGCAATTGG
GGAGTGAGAACTTAAGGACAATACTCTACATTCTGAGCTCTTACGTTCTT
CTTTCCCCAACAAAATTTCTTCATAGCTTTGGCAAAGAAATCAATTCGAT
TCTTACAGACCAGATAATGGATTTGCAAGACGAAGGTGTTTTAATTATAT
ACCGCCTTGTTGAGCTTGTCATCAAGACATGTCCCCCGTCCTCATCATCT
ATTTACTATTTTAAAAGTCTCATTGTTAGCTCATTGAAGGCTATACATAA
TGCCTCGCACTCCTACTCAATGCTGATGTCTTGTGAGCTGAGTATTCTGT
CTAGATTAATTTTGTGCTATCCCAAGGAATTTGGAGATTTCTCCATCGAG
CTTGCTCGAGAGCTGAATCAACCTCATGAAAAAGTTACAGGTAAATTGCA
CAATATCATTATCACACCCATCTAGATATACTTTATATATATTTCAGGTC
AGATTCTTGATCATTGGCTAGAGAAAATGGATCTTATGTGGGSCTCGGAA
GAAAAGAAGCTATTAGCCCRAGCTCTCTGCTCTCTTCTTACAAGCGGATC
TCCGGTTGTACTTGATAGAATATACATGATATTCCTAAATGTCACATCAG
CTCTTAATGATGTTACGAAGCCGGATAATAATGGTGGATTCGTGGACACG
CTTGTAATGTCTAATCCTTGTCAGACAGATGACGGCGATAATGCTGAGTA
TGAGACTGAGCATGAAGCACGAAAACGTCGACTTGCATCCTGTGATTCTG
TACATTCTGTTGATTTAAGAGAGTATTTTCAAACACAACTTGCTGGACTT
TATCAACAAATTGGTCAGTCAAGATATTCCGAGATGATTGAAAACATTGA
TGTTGAGACCAAAGCTAACATGAAGGAATTTGTTACTATCTAAATCGCTA
CATACAGGCGTTCATACAAAGCCTTCTTCACAATCTCTTGAAAGACTTAT
CATCGTTATGTTCCTATAACAATCTTTTATTATTAAATTTAGTTTAGTGT
ATCTATATAATATATATATATATATATATATTTTCAAGAAAGAAAGAAAA
ACAATACTGGTTAAAAAAAAAAGAAATGTTGAAGAAACACCGATTTACTA
ACATAACTTGGGCTGAATTTTTGCCTTTTGTTGCCATAGTCATTTTTTAA
TTAATTTCAAAAAAATATGCGTTTAC back to top
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